Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30420
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF020267-1|AAC26597.1| 223|Homo sapiens myosin-IXb splice varia... 32 0.81
AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb... 31 1.9
BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein pr... 30 3.3
BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein. 30 3.3
BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 3.3
BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 3.3
BC036740-1|AAH36740.2| 981|Homo sapiens GON4L protein protein. 30 3.3
AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein. 30 3.3
AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein. 30 3.3
AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein. 30 3.3
AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 3.3
AK222851-1|BAD96571.1| 852|Homo sapiens Hypothetical protein DK... 30 3.3
AK022985-1|BAB14347.1| 725|Homo sapiens protein ( Homo sapiens ... 30 3.3
AB232668-1|BAF51560.1| 1543|Homo sapiens YY1AP-related protein3 ... 30 3.3
AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1 ... 30 3.3
AK000334-1|BAA91091.1| 626|Homo sapiens protein ( Homo sapiens ... 29 7.6
U32376-1|AAB04949.1| 870|Homo sapiens channel associated protei... 29 10.0
AB209252-1|BAD92489.1| 555|Homo sapiens chapsyn-110 variant pro... 29 10.0
>AF020267-1|AAC26597.1| 223|Homo sapiens myosin-IXb splice variant
protein.
Length = 223
Score = 32.3 bits (70), Expect = 0.81
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 316 LQSCTTLRFQLPSNTPIMS--KIMLPRSMSSHIPSRIP 423
L S T+R + P TPIMS I LP + SH+P P
Sbjct: 110 LSSFVTVRVKTPRRTPIMSTANIKLPPGLPSHLPRWAP 147
>AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb
protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 226 HVESKGLRESVLEQHDSILGYNVPLLDEKARHGERCFGKTQHGRGPR 86
++E ++E V+E+H LGY + L EK R E GK + +G +
Sbjct: 155 YLEEMQVKE-VVEKHSQFLGYPITLYLEKEREKEISDGKAEEEKGEK 200
>BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein
protein.
Length = 1546
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1151 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1204
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1205 TSFPCPLNQSLVASSVSPLIVSGNS 1229
>BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein.
Length = 1098
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 330 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 383
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 384 TSFPCPLNQSLVASSVSPLIVSGNS 408
>BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>BC036740-1|AAH36740.2| 981|Homo sapiens GON4L protein protein.
Length = 981
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 586 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 639
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 640 TSFPCPLNQSLVASSVSPLIVSGNS 664
>AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein.
Length = 1529
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein.
Length = 2241
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein.
Length = 2241
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AK222851-1|BAD96571.1| 852|Homo sapiens Hypothetical protein
DKFZp761I241 (Fragment) variant protein.
Length = 852
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 457 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 510
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 511 TSFPCPLNQSLVASSVSPLIVSGNS 535
>AK022985-1|BAB14347.1| 725|Homo sapiens protein ( Homo sapiens
cDNA FLJ12923 fis, clone NT2RP2004681, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 725
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 330 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 383
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 384 TSFPCPLNQSLVASSVSPLIVSGNS 408
>AB232668-1|BAF51560.1| 1543|Homo sapiens YY1AP-related protein3
protein.
Length = 1543
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1
protein.
Length = 2240
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 208 APLIQHAGPIVHAAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 387
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 388 RS----MSSHIPSRIPTPAITSPNT 450
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AK000334-1|BAA91091.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ20327 fis, clone HEP10012. ).
Length = 626
Score = 29.1 bits (62), Expect = 7.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 322 TGACCTGLKCWTTGEACIYEECSR 251
+ +CCT CW G +C C+R
Sbjct: 594 SSSCCTTWACWAAGPSCCCCPCTR 617
>U32376-1|AAB04949.1| 870|Homo sapiens channel associated protein
of synapse protein.
Length = 870
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 414 RRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQ 304
R N++ + ++ D HD S+ R RG L HV++
Sbjct: 10 RTNVKKYRYQDEDAPHDHSLPRLTHEVRGPELVHVSE 46
>AB209252-1|BAD92489.1| 555|Homo sapiens chapsyn-110 variant
protein.
Length = 555
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 414 RRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQ 304
R N++ + ++ D HD S+ R RG L HV++
Sbjct: 23 RTNVKKYRYQDEDAPHDHSLPRLTHEVRGPELVHVSE 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,654,670
Number of Sequences: 237096
Number of extensions: 1607038
Number of successful extensions: 4780
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4776
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -