Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30419
(777 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 154 2e-36
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 144 2e-33
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 129 9e-29
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 119 7e-26
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 118 2e-25
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 108 2e-22
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 91 2e-17
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 89 9e-17
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 89 9e-17
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 88 2e-16
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 84 3e-15
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 84 3e-15
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 78 2e-13
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 77 4e-13
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 76 1e-12
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 74 5e-12
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 71 2e-11
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 70 7e-11
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 64 5e-09
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 62 1e-08
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 57 4e-07
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 56 1e-06
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 53 7e-06
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 53 7e-06
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 52 1e-05
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 52 1e-05
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 51 4e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 51 4e-05
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 49 1e-04
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 48 3e-04
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 47 5e-04
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 47 6e-04
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 47 6e-04
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 46 8e-04
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 46 0.001
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 46 0.001
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 44 0.003
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 44 0.004
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 44 0.004
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 44 0.006
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 44 0.006
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 43 0.007
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.010
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.010
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 42 0.013
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 42 0.013
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 42 0.013
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 42 0.013
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 42 0.017
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 42 0.017
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 42 0.023
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 42 0.023
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.023
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 42 0.023
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.092
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 40 0.092
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 40 0.092
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 39 0.12
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 39 0.12
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 39 0.16
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.16
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.28
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.28
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.28
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 38 0.37
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 38 0.37
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.37
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 37 0.49
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.49
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 37 0.49
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 0.85
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 36 1.1
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 35 2.0
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 3.4
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 34 4.6
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 34 4.6
UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3; ... 34 4.6
UniRef50_Q6Z3M9 Cluster: Putative uncharacterized protein OSJNBa... 34 4.6
UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep: P... 34 4.6
UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response regul... 33 6.0
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 33 8.0
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 154 bits (374), Expect = 2e-36
Identities = 79/155 (50%), Positives = 97/155 (62%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN
Sbjct: 82 MHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQ 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYXX 623
D K+TRVKLPSGAKKV+PS+NRA ++ + K + +
Sbjct: 142 DTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRG 201
Query: 624 XXXXXXXXXXXXXXXXXXXRLSTVKRGTSAGRKIG 728
+ STVKRGTSAGRK+G
Sbjct: 202 VAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVG 236
Score = 151 bits (365), Expect = 3e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLAV 202
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+G VKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
VHFRDPY++K RKELFI P+ +H
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMH 83
Score = 129 bits (311), Expect = 9e-29
Identities = 62/89 (69%), Positives = 67/89 (75%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGKA
Sbjct: 163 RAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKA 222
Query: 686 FHCQERNICWSQNWA*LLLARPERISGGQ 772
+R + + R RI GG+
Sbjct: 223 -STVKRGTSAGRKVGLIAARRTGRIRGGK 250
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 144 bits (350), Expect = 2e-33
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRA 164
Score = 136 bits (330), Expect = 4e-31
Identities = 62/83 (74%), Positives = 70/83 (84%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPY+FK R ELFI + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 123 bits (297), Expect = 4e-27
Identities = 52/59 (88%), Positives = 55/59 (93%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 682
+ +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 163 RAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGK 221
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 129 bits (311), Expect = 9e-29
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLAV 202
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KG VKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V FRDPYK+K R E FI + ++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMY 83
Score = 128 bits (308), Expect = 2e-28
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ +VGIVAGGGRIDKP+LKAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKA
Sbjct: 139 RAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKA 198
Score = 86.2 bits (204), Expect = 8e-16
Identities = 57/155 (36%), Positives = 76/155 (49%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
+YTGQF+YCGKKA L++ RG+LARASGN+ATVI HNP
Sbjct: 82 MYTGQFIYCGKKANLQI------------------------RGKLARASGNYATVISHNP 117
Query: 444 DAKRTRVKLPSGAKKVLPSSNRAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYXX 623
D K++RVKLPSG+KKV+PS+NRA ++ + K ++
Sbjct: 118 DTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCWPKVRG 177
Query: 624 XXXXXXXXXXXXXXXXXXXRLSTVKRGTSAGRKIG 728
+ STV+R TSAGRK+G
Sbjct: 178 VAMNPVEHPHGGGNHQHIGKASTVRRDTSAGRKVG 212
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 119 bits (287), Expect = 7e-26
Identities = 49/74 (66%), Positives = 63/74 (85%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
LY+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN
Sbjct: 73 LYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNA 132
Query: 444 DAKRTRVKLPSGAK 485
D + TR++LPSGAK
Sbjct: 133 DNETTRIRLPSGAK 146
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +2
Query: 146 KGFVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKALH 271
+G VK I HDPGRGAPLA V FR+P ++ KELFI + L+
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLY 74
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 118 bits (284), Expect = 2e-25
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLAV 202
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KG V +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 203 VHFRDPYKFKTRKELFI 253
V FR P++FK +KELF+
Sbjct: 61 VTFRHPFRFKKQKELFV 77
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 282 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 389
+YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 108 bits (259), Expect = 2e-22
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = +2
Query: 35 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLAVVHFR 214
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+G VK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 215 DPYKFKTRK 241
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 682
+GI AG GRI+KPI+KAG AYHK+KVK WP VRGVAMN V+HP GGG HQH G+
Sbjct: 156 IGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGR 211
Score = 76.6 bits (180), Expect = 7e-13
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
+Y GQ + G A E GN++P+G +PEGT V N+E + GD G+LAR +G++A V+G
Sbjct: 74 MYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGR-- 131
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+T ++LPSG K +P+ +RA
Sbjct: 132 AGAKTILRLPSGKDKEVPNDSRA 154
Score = 35.5 bits (78), Expect = 1.5
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLA 199
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 200 VVHFRDPYKF 229
V D +F
Sbjct: 57 RVVREDGVEF 66
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 89.4 bits (212), Expect = 9e-17
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + +GI AG GR +KP+LKAG AY+K+K K WP VRGVAMN V HPHGGGNHQ G
Sbjct: 155 KARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPG 214
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
+YTGQ V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A ++G +
Sbjct: 78 MYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSG 137
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
++ ++LPSG K + + RA
Sbjct: 138 NS--AIIQLPSGKVKQVNAKARA 158
Score = 33.9 bits (74), Expect = 4.6
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGFVKDIIHDPGRGAPLA 199
MG+ +R QR G G+ + + AP + S + + +G+V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 89.4 bits (212), Expect = 9e-17
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +2
Query: 512 MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAFH 691
+VG+VAGGG DKP+LKA A++K K + + +P VRGVAMNPVEH HGGGNHQH+GK
Sbjct: 151 IVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTT 210
Query: 692 CQERNICWSQ 721
+++I Q
Sbjct: 211 VSKKDISQEQ 220
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
+YTGQ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H
Sbjct: 68 MYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRK 127
Query: 444 DAKRTRVKLPSGAKKVLPSSNR 509
+ T +K+PSG K + S R
Sbjct: 128 ETNETVIKIPSGKKLTVSSECR 149
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 88.2 bits (209), Expect = 2e-16
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 682
+ +VG+VAGGG +KP+LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ + +
Sbjct: 152 RAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSR 210
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
L GQ + GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR++G + V+G
Sbjct: 73 LVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTG 132
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
D + VKL S + S+ RA
Sbjct: 133 D--KVLVKLSSEKIAQVSSNARA 153
Score = 41.9 bits (94), Expect = 0.017
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLA 199
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 200 VVHFRDPYKF 229
++ D KF
Sbjct: 56 LIKLDDGTKF 65
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 84.2 bits (199), Expect = 3e-15
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 7/226 (3%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLAV 202
MG++I AQRKG + +R G +S+ E++ IKG + D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 203 VHFRDPYKFKTRKELFI-VPKALHRPICLLWKESNS*SWKCDACWSYA*G-YHC-VQS*R 373
+ F FK EL+I V K ++ + ++ G + C V+
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKE 146
Query: 374 ENG**--RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGSAIKQ--QGMVGIVAGGGR 541
+G RS+G + L H + +K + S++ + + +G+VAGGG+
Sbjct: 147 GDGGKLARSAGAFVGVLSHSKYNNV------TKLKLPSKKIKILSSFCRATIGVVAGGGK 200
Query: 542 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
+KP+LKAG+ Y+K+K +P V+ + HPHGGGNHQHIG
Sbjct: 201 YEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIG 246
Score = 75.4 bits (177), Expect = 2e-12
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
LY + + CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+ H+
Sbjct: 108 LYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHSK 167
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
T++KLPS K+L S RA
Sbjct: 168 YNNVTKLKLPSKKIKILSSFCRA 190
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
LY GQ V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G +A VIG P
Sbjct: 74 LYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKP 133
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ +T ++LPSG + S RA
Sbjct: 134 EENKTIIRLPSGRTVEVDSRGRA 156
Score = 79.8 bits (188), Expect = 7e-14
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
VGIVAGGGRI+KP LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ G
Sbjct: 158 VGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG 212
Score = 39.5 bits (88), Expect = 0.092
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 23 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLA 199
MG+ I QR+G GS F S + KR G + L KG+V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISG----KGYVVDILHEPGLNAPVA 56
Query: 200 VV 205
+
Sbjct: 57 KI 58
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVK 160
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 77.4 bits (182), Expect = 4e-13
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 682
+G+++GGG+ +KP +KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK
Sbjct: 160 IGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGK 215
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/80 (41%), Positives = 47/80 (58%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G + CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G +AT+I H D
Sbjct: 81 GDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVG 138
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
RT V+LPSG + RA
Sbjct: 139 RTYVQLPSGKVRTFDPRCRA 158
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLA 199
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 200 VVHFRD 217
V F D
Sbjct: 61 RVRFED 66
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + +VGIVAG GR+D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H G
Sbjct: 152 KCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPG 211
Query: 680 K 682
K
Sbjct: 212 K 212
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G + CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H +A
Sbjct: 78 GNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EAT 135
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
RT V +PSG K L RA
Sbjct: 136 RTAVSMPSGNIKWLNPKCRA 155
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 73.7 bits (173), Expect = 5e-12
Identities = 36/57 (63%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGK 682
VG+VA G ID PILKAG H + K PY VRGVAMN V HPHGGGNHQH+G+
Sbjct: 151 VGVVAASGIIDAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGR 206
Score = 60.1 bits (139), Expect = 6e-08
Identities = 41/154 (26%), Positives = 60/154 (38%)
Frame = +3
Query: 267 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 446
Y GQ + G T+ G + +P+G+ V N+E GD G R++G FA V+ H
Sbjct: 71 YVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH--- 127
Query: 447 AKRTRVKLPSGAKKVLPSSNRAWSVLLLEVDVLTNLF*KLEGHTTSTRSNVTAGHMYXXX 626
R +KLPSG+ + RA ++ ++ K H RS +
Sbjct: 128 GSRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHYLRSKAKRPYTVRGV 187
Query: 627 XXXXXXXXXXXXXXXXXXRLSTVKRGTSAGRKIG 728
R STV R GRK+G
Sbjct: 188 AMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVG 221
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 71.3 bits (167), Expect = 2e-11
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + M+G +AGGG ++P + AG + +K K +P VRGVA HPHGGG HQH+G
Sbjct: 153 KNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVG 212
Query: 680 KA 685
++
Sbjct: 213 QS 214
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G+ + G K+ +E GNV+ + +P+GTIVCN+E+ GD G + +++G ATV H +
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG- 137
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
VKLPSG L NRA
Sbjct: 138 -VTVKLPSGKFTTLNPKNRA 156
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 69.7 bits (163), Expect = 7e-11
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + MVG +AGGG ++P + AG + +++ K +P VRGVA HPHGGG HQH+G
Sbjct: 152 KNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVG 211
Query: 680 KA 685
++
Sbjct: 212 QS 213
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G + G K+ + GNV+ V +P+GT VCN+E+ GD G + +++G ATV H
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG- 136
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
+KLPSG L NRA
Sbjct: 137 -VVLKLPSGRFSTLNPKNRA 155
Score = 35.1 bits (77), Expect = 2.0
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLA 199
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 200 VVHFRD 217
+ F D
Sbjct: 58 KIRFED 63
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G VY GK+A +G++ P+ +PEGT + LE GD G+L RASG+FA ++ D
Sbjct: 78 GDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD-- 135
Query: 453 RTRVKLPSGAKKVLPSSNRA 512
+ V+LPSG K L ++ RA
Sbjct: 136 KVIVQLPSGQFKTLSANARA 155
Score = 62.5 bits (145), Expect = 1e-08
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ ++G++AGGGR +KP +KAG Y+ + WP V GV N +HP GG H + K
Sbjct: 154 RAVIGVIAGGGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKP 213
Query: 686 F 688
F
Sbjct: 214 F 214
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 62.5 bits (145), Expect = 1e-08
Identities = 26/55 (47%), Positives = 40/55 (72%)
Frame = -3
Query: 673 MLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHA 509
+L+V T+ ML+RVHG+T + WPA+ L+LV+ + QN VN +TSS++TDH+
Sbjct: 41 VLVVATSKGMLHRVHGHTPHAWPAIPLGLILVIGTAGLQNGLVNAATSSHHTDHS 95
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G + + A ++VGN P+ +PEGT++ N+E K G G++AR++G ++G + D K
Sbjct: 114 GMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGK 173
Query: 453 RTRVKLPSG-AKKVL 494
++L SG +KVL
Sbjct: 174 YVTLRLTSGEVRKVL 188
Score = 36.7 bits (81), Expect = 0.65
Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Frame = +2
Query: 587 KVKRNCW----PYVRGVAMNPVEHPHGGG 661
K RN W P VRG MNP +HPHGGG
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGG 238
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
L G V G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G A ++G
Sbjct: 110 LEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG--K 167
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
+ K V+L SG +++ ++RA
Sbjct: 168 EGKYAIVRLSSGEVRLVLLTSRA 190
Score = 36.3 bits (80), Expect = 0.85
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 560 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
KAGR +++ KR P VRG MNP +HPHGGG
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +3
Query: 312 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 491
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 492 LPSSNRA 512
+ S RA
Sbjct: 419 IDSRCRA 425
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+GIV+ + KAG++ ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 427 IGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGG 470
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +3
Query: 306 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 485
++ GN MP+ +PEGTIV N+E G G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 486 KVL 494
+++
Sbjct: 209 RMI 211
Score = 41.9 bits (94), Expect = 0.017
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQHIGK 682
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
L G V G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G
Sbjct: 110 LAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR-- 167
Query: 444 DAKRTRVKLPSGAKKVL 494
D ++L SG ++++
Sbjct: 168 DQGMAILRLNSGEQRLV 184
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +2
Query: 560 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
KAGR+ ++ KR P+VRGVAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G + G + +++GN +P+ MP GT + N+E +G G+LARA+G A +I + K
Sbjct: 111 GDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGK 168
Query: 453 RTRVKLPSGAKKVL 494
+KLPSG +++
Sbjct: 169 SATLKLPSGEVRLI 182
Score = 41.5 bits (93), Expect = 0.023
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 602 CW----PYVRGVAMNPVEHPHGGG 661
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI-GHN 440
L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +I HN
Sbjct: 204 LKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN 263
Query: 441 PDAKRTRVKLPSGAKKVLP 497
K ++LPSG K P
Sbjct: 264 ---KYAILRLPSGELKSFP 279
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
+GIV+ + + KAG + ++ +R P VRGVAMNP++HPHGGG + G
Sbjct: 286 IGIVSNLNHFNTDLKKAGAS--RWLGRR---PTVRGVAMNPIDHPHGGGEGRTSG 335
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 50.8 bits (116), Expect = 4e-05
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +3
Query: 306 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 479
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSG 269
Score = 40.3 bits (90), Expect = 0.052
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 560 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 494
GN +P+ MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
Score = 38.3 bits (85), Expect = 0.21
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
VG+ + + + KAGR+ N P VRG+AMN EHPHGGG + G
Sbjct: 280 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +3
Query: 312 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 491
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 492 LPSSNRA 512
+ S RA
Sbjct: 381 IDSRCRA 387
Score = 42.7 bits (96), Expect = 0.010
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
VGIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 389 VGIVSNLHHGKRKLDKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGG 432
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/74 (31%), Positives = 44/74 (59%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G + G ++ ++VGN +P+ +P T + N+E G G+L R++G+ AT++ D
Sbjct: 139 GDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGG 198
Query: 453 RTRVKLPSGAKKVL 494
V+LPSG ++++
Sbjct: 199 YCVVRLPSGEQRLV 212
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +2
Query: 584 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIGKAFHC 694
YK +N W P VRGVAMNPV+HPHGGG + G C
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSGGRHSC 220
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +3
Query: 309 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 488
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 489 VLPS 500
+ S
Sbjct: 353 AVDS 356
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+GIV+ + + KAG + ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 362 IGIVSNPSHGTRKLRKAGHS--RWLGRR---PVVRGVAMNPVDHPHGGG 405
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +2
Query: 584 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIGKAFHC 694
YK +N W P VRGVAMNPV+HPHGGG + G C
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSGGRHPC 220
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 50 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGFVKDIIHDPGRGAPLAVVHFRDPYK 226
+ G + V H K K R +D+ IKG V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 312 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 491
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 492 LPSSNRA 512
+ + RA
Sbjct: 73 INAKCRA 79
Score = 40.7 bits (91), Expect = 0.040
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Frame = +2
Query: 584 YKVKRNCW----PYVRGVAMNPVEHPHGGG 661
YK ++ W P VRGVAMNP +HPHGGG
Sbjct: 95 YKAGQSRWLGIRPKVRGVAMNPCDHPHGGG 124
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/27 (74%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 581 KYKVKRNCWPYVRGVAM-NPVEHPHGG 658
K +KRN W VRGVAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +3
Query: 309 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 488
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 489 VLPSSNRA 512
++ S RA
Sbjct: 417 LIDSRCRA 424
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+GIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 426 IGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGG 469
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEG 350
+YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 48 IYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 503 QQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
Q + G G ++ + + AGR+ ++ KR P VRGVAMNP++HPHGGG + G
Sbjct: 166 QSAVKGANLGNTKLFEKLKMAGRS--RWLSKR---PSVRGVAMNPIDHPHGGGEGKTSG 219
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +2
Query: 500 KQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
K + +G V G +++ + KAGR +++ KR P VRG+ MNPV+HP+GGG + G
Sbjct: 190 KCRATIGEVGNGEHMNRKLGKAGR--NRWLGKR---PRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+G V ++KAG + +++ KR P VRGVAMNPV+HPHGGG
Sbjct: 168 LGQVGNESHFLSSLMKAGES--RWRNKR---PKVRGVAMNPVDHPHGGG 211
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+GIV+ + KAG++ ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 188 IGIVSNENHGKRNFRKAGQS--RWLGRR---PVVRGVAMNPVDHPHGGG 231
Score = 41.9 bits (94), Expect = 0.017
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +3
Query: 312 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 491
+GN + + +P GT++ N+E G + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 492 LPSSNRA 512
+ S RA
Sbjct: 180 INSQCRA 186
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 303 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 479
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSG 292
Score = 39.9 bits (89), Expect = 0.069
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +2
Query: 458 KSKATVWSQEGS----AIKQQGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 625
K KA V Q G +++ +G+V+ ++ + KAGR+ ++ R P VRGV
Sbjct: 282 KKKAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGV 336
Query: 626 AMNPVEHPHGGG 661
AMN +HPHGGG
Sbjct: 337 AMNKCDHPHGGG 348
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 530 GGGRIDKPILKAGRAYHKYKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIGKA 685
G G + K R + K R+ W P VRGVAMNPV+HPHGGG + KA
Sbjct: 192 GFGTLGKTSNLMQRNVNLGKAGRSRWLGIRPTVRGVAMNPVDHPHGGGEGKKSKKA 247
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRK 94
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 37.1 bits (82), Expect = 0.49
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
VG+ + + + KAGR+ N P VRG+AMN +HPHGGG + G
Sbjct: 311 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 42.3 bits (95), Expect = 0.013
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
Q +V G +D +G+A K P VRGV MNPV+HPHGGG
Sbjct: 186 QNRPAVVGQAGNVDSKNRASGKAGSKRWPGSR--PRVRGVVMNPVDHPHGGG 235
Score = 40.3 bits (90), Expect = 0.052
Identities = 28/103 (27%), Positives = 42/103 (40%)
Frame = +3
Query: 204 YTSAIHTXXXXXXXXXXXXXLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 383
Y S +H + G + G A VGN P MP GT++ +E G
Sbjct: 90 YISPVHHGDGDKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPG 149
Query: 384 DRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 512
G+ ARA+G A + + +R LP G + +P + A
Sbjct: 150 KGGQSARAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQNRPA 190
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -2
Query: 392 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPSG 255
T++TH + +AHNGTL S R +I+N + L+TI++L V G
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALG 52
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 42.3 bits (95), Expect = 0.013
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQHIG 679
P VRGVAMNPV+HPHGGG + G
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSG 222
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 596 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
Score = 38.3 bits (85), Expect = 0.21
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
L G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 116 LSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVAKEG 175
Query: 444 DAKRTRVK 467
+ R++
Sbjct: 176 EYATLRMR 183
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 41.9 bits (94), Expect = 0.017
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 569 RAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGNHQHIGKAFHCQERNIC 712
R K +RN W P VRG+AMN HPHGGGN + K C IC
Sbjct: 250 RILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGNDKSGTKRPKCSIWGIC 299
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 41.9 bits (94), Expect = 0.017
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +3
Query: 306 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 485
++ G MP+ +PEGT V N+E G++AR++G++A ++G + K ++L SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSGET 189
Query: 486 KVLPSSNRA 512
+ RA
Sbjct: 190 RKFLKECRA 198
Score = 39.5 bits (88), Expect = 0.092
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
VG+V+ I KAGR H R P VRG AMNP +HPHGGG
Sbjct: 200 VGVVSNLDHNLVVIGKAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 41.5 bits (93), Expect = 0.023
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQHIG 679
P VRGVAMNP++HPHGGG + G
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSG 224
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 41.5 bits (93), Expect = 0.023
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 602 CW----PYVRGVAMNPVEHPHGGG 661
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
Score = 39.5 bits (88), Expect = 0.092
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +3
Query: 339 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 494
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLI 52
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.023
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 602 CW----PYVRGVAMNPVEHPHGGG 661
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 41.5 bits (93), Expect = 0.023
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 542 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 658
I+K I K+ +A K + P VRG+AMNPV+HPHGG
Sbjct: 181 IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
Score = 33.5 bits (73), Expect = 6.0
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +3
Query: 294 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 473
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 474 SGAKKVLPSSNRAWSVL 524
S +++ SN ++ +
Sbjct: 161 SKECRLI--SNECYATI 175
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.092
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGG 658
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 35.1 bits (77), Expect = 2.0
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 339 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 479
+P GTI+ N+ + + +++GNFA +I D + ++KLPSG
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG 181
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 39.5 bits (88), Expect = 0.092
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -2
Query: 512 CPVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSS 333
C + W NLL R L IR+V++ + ++ + TSIT+ +F + GT +
Sbjct: 70 CSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGSRA 129
Query: 332 NRHHISNFKSCFLSTINKLACV 267
++ + FL+ N+LA V
Sbjct: 130 QGQNVIGNEGGFLTAANELARV 151
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 39.5 bits (88), Expect = 0.092
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 584 YKVKRNCWPYVRGVAMNPVEHPHGGG 661
YK+K P VRG AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 584 YKVKRNCWPYVRGVAMNPVEHPHGGGNHQ-HIGKAFHCQERNI 709
Y + N P VRG A N +HPHGGG + IG+ + C ++ +
Sbjct: 194 YNIYYNIKPKVRGKAKNVCDHPHGGGKGKTGIGRKYPCSKKGL 236
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 306 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 485
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 486 KVL 494
+ +
Sbjct: 280 RYI 282
Score = 37.5 bits (83), Expect = 0.37
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 560 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 38.7 bits (86), Expect = 0.16
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGG 658
P VRG+AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 494
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 37.9 bits (84), Expect = 0.28
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 614 VRGVAMNPVEHPHGGG 661
VRGV MNPV+HPHGGG
Sbjct: 11 VRGVVMNPVDHPHGGG 26
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.28
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 431
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.28
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 294 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 437
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
Score = 37.5 bits (83), Expect = 0.37
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 587 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 679
K RN W P+VRG AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 37.5 bits (83), Expect = 0.37
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
L G + G KA L++GN +P+ + G+ + N+E + +G L + + N +I
Sbjct: 101 LKIGSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIG 159
Query: 444 DAKRTRVKLPSGAKKVL 494
D T VKLPSG K+L
Sbjct: 160 DIYVT-VKLPSGEIKLL 175
Score = 37.5 bits (83), Expect = 0.37
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 524 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+ G I + + K + + + K + P +RG AMN V+HPHGGG
Sbjct: 182 ILGQLEIRRKVNKNIKKHAGFNRKLSIRPKIRGAAMNAVDHPHGGG 227
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 37.5 bits (83), Expect = 0.37
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 476
G+ P+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 37.5 bits (83), Expect = 0.37
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 515 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 661
+G V+ + + KAGR+ ++ +R P VRGVAMN +HPHGGG
Sbjct: 374 IGTVSNKDHQHRRLGKAGRS--RWLGRR---PKVRGVAMNACDHPHGGG 417
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 37.1 bits (82), Expect = 0.49
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 392 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACV 267
T +TH + +AHNGTL S R +I+N + L+ +++L V
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGV 60
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.49
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 614 VRGVAMNPVEHPHGG 658
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 37.1 bits (82), Expect = 0.49
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQH-IGKA 685
P VRGVAMN +HPHGGG ++ IG++
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRS 239
Score = 36.3 bits (80), Expect = 0.85
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +3
Query: 273 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 452
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 453 RTRVKLPSGAKKVL 494
+KLPSG ++L
Sbjct: 167 YVTIKLPSGEIRLL 180
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 0.85
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGG 658
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 473
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 584 YKVKRNCWPYVRGVAMNPVEHPHGG 658
Y V R P VRG+ NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 476
G+ P+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 3.4
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 608 PYVRGVAMNPVEHPHGGGNHQ-HIGKAFHC 694
P VRG AMN +HPHGGG + IG+ C
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRSIC 225
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 431
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 130 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 431
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 164 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio splendidus 12B01
Length = 7629
Score = 33.9 bits (74), Expect = 4.6
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = -3
Query: 655 TVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHALLLDGRTFLAP 476
TVR + NT Y+ +FD+ LV+ P + Q FVN + + D ++ +D +
Sbjct: 6662 TVRSVDTDADNTEYLGTPTSFDVDLVIDPINDQPIFVNVTNIETSEDISVAIDNFSIYDV 6721
Query: 475 DGSF 464
D +F
Sbjct: 6722 DANF 6725
>UniRef50_Q6Z3M9 Cluster: Putative uncharacterized protein
OSJNBa0087F21.12; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0087F21.12 - Oryza sativa subsp. japonica (Rice)
Length = 159
Score = 33.9 bits (74), Expect = 4.6
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 558 KIGLSIRPPPATIPTMPCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQRHVPDDLYHP 379
++ L++ P T+PT C A PSW+ T A++ + S R Q H+ DL+ P
Sbjct: 15 ELALAMARLPTTMPTSICGFAASPSWIHTDAIV-----DGIISSSIRCAQLHLDLDLHCP 69
>UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep:
Protein lozenge - Drosophila melanogaster (Fruit fly)
Length = 826
Score = 33.9 bits (74), Expect = 4.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 524 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 673
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
>UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response
regulator receiver; n=1; Robiginitalea biformata
HTCC2501|Rep: Regulatory protein, LuxR:Response
regulator receiver - Robiginitalea biformata HTCC2501
Length = 536
Score = 33.5 bits (73), Expect = 6.0
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 679
+G+ + G GR+D P+LKA AY V+ + G + +EH + NH H+G
Sbjct: 356 EGLKELRDGIGRVDAPLLKAQAAYASGLVR-----FAEGNLQDALEHLNEALNHIHVG 408
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 8.0
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 360 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 494
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 33.1 bits (72), Expect = 8.0
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 315 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 431
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 869,292,995
Number of Sequences: 1657284
Number of extensions: 19620442
Number of successful extensions: 53411
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 51023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53390
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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