Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30417
(407 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 119 3e-26
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 115 4e-25
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 114 6e-25
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 114 6e-25
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 107 1e-22
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 106 2e-22
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 100 2e-20
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 95 4e-19
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 93 1e-18
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 92 5e-18
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 91 6e-18
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 91 1e-17
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 90 1e-17
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 89 3e-17
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 88 7e-17
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 88 7e-17
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 84 1e-15
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 82 5e-15
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 81 8e-15
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 80 2e-14
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 76 3e-13
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 74 1e-12
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 73 2e-12
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 73 2e-12
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 73 2e-12
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 66 2e-10
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 65 4e-10
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 63 2e-09
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 60 2e-08
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 55 6e-07
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 50 1e-05
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 3e-04
UniRef50_A5DI62 Cluster: Putative uncharacterized protein; n=1; ... 36 0.42
UniRef50_Q4CV28 Cluster: Putative uncharacterized protein; n=2; ... 35 0.55
UniRef50_Q24FW2 Cluster: Von Willebrand factor type A domain con... 35 0.55
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.73
UniRef50_A6NIY6 Cluster: Uncharacterized protein MAN1B1; n=2; Ho... 33 2.9
UniRef50_Q7RWL8 Cluster: Predicted protein; n=1; Neurospora cras... 33 2.9
UniRef50_Q6C7K7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 32 3.9
UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n... 32 5.1
UniRef50_A6S452 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_Q6PBF7 Cluster: Transmembrane protein 85; n=4; Deuteros... 31 6.8
UniRef50_A6QV20 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 8.9
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 119 bits (286), Expect = 3e-26
Identities = 52/88 (59%), Positives = 68/88 (77%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RNGV
Sbjct: 28 LKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGV 87
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSHF R S S+AR+ LQ+LE LK++ K
Sbjct: 88 MPSHFSRGSKSVARRVLQALEGLKMVEK 115
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 243 GIEAVEKVQDGGRILTTQGRRDLDRI 320
G++ VEK QDGGR LT QG+RDLDRI
Sbjct: 109 GLKMVEKDQDGGRKLTPQGQRDLDRI 134
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 115 bits (276), Expect = 4e-25
Identities = 51/88 (57%), Positives = 66/88 (75%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
VKVPE DLVK KELAP D DW+YVR A++ R +YIRSP GV + +++G KR GV
Sbjct: 29 VKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGSNKRRGV 88
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
TP+HF ++SGS+ RKALQ+LEA+K + K
Sbjct: 89 TPNHFAKASGSVIRKALQTLEAIKWVEK 116
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 114 bits (275), Expect = 6e-25
Identities = 48/86 (55%), Positives = 66/86 (76%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+++PE +D+VKTARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG
Sbjct: 51 MELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGS 110
Query: 181 TPSHFCRSSGSIARKALQSLEALKLL 258
P HFC+SSG+I+R LQ L+ + ++
Sbjct: 111 RPPHFCKSSGAISRNILQQLQKMGII 136
Score = 31.5 bits (68), Expect = 6.8
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = +3
Query: 273 GGRILTTQGRRDLDRI 320
GGR++T+QGRRDLD++
Sbjct: 142 GGRLITSQGRRDLDQV 157
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 114 bits (275), Expect = 6e-25
Identities = 48/86 (55%), Positives = 66/86 (76%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+++PE +D+VKTARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG
Sbjct: 31 MELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGS 90
Query: 181 TPSHFCRSSGSIARKALQSLEALKLL 258
P HFC+SSG+I+R LQ L+ + ++
Sbjct: 91 RPPHFCKSSGAISRNILQQLQKMGII 116
Score = 31.5 bits (68), Expect = 6.8
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = +3
Query: 273 GGRILTTQGRRDLDRI 320
GGR++T+QGRRDLD++
Sbjct: 122 GGRLITSQGRRDLDQV 137
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 107 bits (256), Expect = 1e-22
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
V++P+ D+VK + +LAPY+PDWFYVRCAAILRH+YIR P G+ + K F +KRNGV
Sbjct: 28 VRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAILRHLYIR-PTGLTGLCKAFSRKKRNGV 86
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSH + GS+ RKA+Q +EAL L +K
Sbjct: 87 KPSHRSLAHGSVIRKAIQQMEALGLCQK 114
Score = 31.5 bits (68), Expect = 6.8
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 258 EKVQDGGRILTTQGRRDLDRI 320
+K + GGR LT+ GRRDLDR+
Sbjct: 113 QKREGGGRSLTSAGRRDLDRL 133
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 106 bits (254), Expect = 2e-22
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +1
Query: 10 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 189
P+ +D+VKT KELAPYDPDW+YVR AAI RHIY+R VGV + K++GG G+ PS
Sbjct: 31 PQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPS 90
Query: 190 HFCRSSGSIARKALQSLEALKLLRK 264
H SGS+ RK +QSLE + +L K
Sbjct: 91 HHRDGSGSVQRKVVQSLEKIGVLEK 115
Score = 32.3 bits (70), Expect = 3.9
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 246 IEAVEKVQDGGRILTTQGRRDLDRI 320
I +EK +GGR ++ QG+RDLDRI
Sbjct: 110 IGVLEKSDNGGRRISQQGQRDLDRI 134
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 99.5 bits (237), Expect = 2e-20
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
++ P+ +D KT+ KELAP DPDWFY+R AA+LRH+Y GV + K++ +KRNG
Sbjct: 50 LECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGS 109
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
P+H CR+SG I R +Q LE++ L +
Sbjct: 110 APNHTCRASGKILRTIVQQLESIGFLEQ 137
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 95.5 bits (227), Expect = 4e-19
Identities = 40/88 (45%), Positives = 60/88 (68%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+++P D+VKTA FKE +P DPDW+Y+R A+I R +Y+R GV ++ K++GG R GV
Sbjct: 37 IELPAWWDVVKTASFKEYSPADPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGV 96
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
HF ++SG + R LQ LE +K++ K
Sbjct: 97 HRQHFQKASGGLIRHILQQLEEMKVVEK 124
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 93.5 bits (222), Expect = 1e-18
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+++P +D +KTA +ELAPYDPDW Y+R A+I R +YIR +G KI+G RKR G+
Sbjct: 35 IEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGM 94
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
P +SSG + R +LQ LE L + K
Sbjct: 95 KPCRSSKSSGGLIRYSLQQLEKLGVAEK 122
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 91.9 bits (218), Expect = 5e-18
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +1
Query: 10 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 189
P+ +D VKT+ KELAP DP WFY+R AAILRH+Y G+ + +++ RKR G P+
Sbjct: 53 PKWIDYVKTSCAKELAPQDPKWFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPN 112
Query: 190 HFCRSSGSIARKALQSLEALKLLRK 264
H C +SG I R +Q LEA L K
Sbjct: 113 HTCPASGKIIRTIVQQLEANGFLEK 137
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 91.5 bits (217), Expect = 6e-18
Identities = 43/88 (48%), Positives = 58/88 (65%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
VK PE ++ VKT KE P +PDW+YVR AA+LR +YI PVGV ++ +GG+K G
Sbjct: 26 VKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGS 85
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
P F R SG+I R+ALQ LE L+++
Sbjct: 86 RPEKFRRGSGAIIRRALQQLEESGLIKR 113
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 90.6 bits (215), Expect = 1e-17
Identities = 42/88 (47%), Positives = 54/88 (61%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+K PE VKT R KE P DPDW+Y+R A+ILR +Y+ PVGV + +GGR+ G
Sbjct: 26 IKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGA 85
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
P F + SG+I RK LQ LE L+ K
Sbjct: 86 RPERFRKGSGAIIRKILQQLEEAGLVEK 113
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 90.2 bits (214), Expect = 1e-17
Identities = 42/88 (47%), Positives = 53/88 (60%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+K PE VKT R KE P DW+Y R A+ILR +YI PVG++ + +GGRK G
Sbjct: 26 IKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGH 85
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
P F ++ GSI RKALQ LEA + K
Sbjct: 86 APERFYKAGGSIIRKALQQLEAAGFIEK 113
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 89.0 bits (211), Expect = 3e-17
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
V++P+ D+ KTA ++EL P +PDW Y R A + R +YIR GV T ++FGG +RNGV
Sbjct: 30 VQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGV 89
Query: 181 TPSHFCRSSGSIARKALQSLEALKLL 258
P+HF +G R L+ L+ LK++
Sbjct: 90 RPNHFADVNGGNIRYCLKQLQNLKVI 115
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 87.8 bits (208), Expect = 7e-17
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +1
Query: 7 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 186
+P +D VKT+ EL P D DW+YVR AA+ RHIY+R VGV + K+ G K G P
Sbjct: 104 IPGWVDTVKTSCSNELPPQDSDWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRP 163
Query: 187 SHFCRSSGSIARKALQSLEALKLL 258
+H +SGS+ RK +QSLE + +L
Sbjct: 164 NHHVDASGSVDRKIIQSLEKIGVL 187
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 87.8 bits (208), Expect = 7e-17
Identities = 41/97 (42%), Positives = 57/97 (58%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+K P KT KE+ P DPDW++ R AA+LR +Y+ P+GV+ + +GG K G
Sbjct: 26 IKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGS 85
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRKFRTVVAFSP 291
P+ F + SGS+ RKALQ LEA L+ +T SP
Sbjct: 86 KPNAFRKGSGSVLRKALQQLEAAGLIVHDKTGRKVSP 122
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 83.8 bits (198), Expect = 1e-15
Identities = 40/90 (44%), Positives = 53/90 (58%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
V PE VKT KE +P DW+Y+R A+I R +YI PVG++ + +GGRKR G
Sbjct: 24 VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGS 83
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRKFR 270
P F + SG+I R AL LE L ++K R
Sbjct: 84 KPPKFRKGSGAIVRNALHQLEQLGFVKKTR 113
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 81.8 bits (193), Expect = 5e-15
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +1
Query: 7 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 186
+PE +D VKTA KEL P + DW Y+R A+ILRH+Y+R VGV ++K +G ++RNG
Sbjct: 43 MPEWVDHVKTASSKELPPQNSDWLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTAR 102
Query: 187 SHFCRSSGSIARKALQSLEALKLL 258
+H +S I R L L++L L+
Sbjct: 103 NHSAVASRGIIRYCLIQLQSLGLV 126
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 81.0 bits (191), Expect = 8e-15
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIR-SPVGVKTVTKIFGGRKRNG 177
VK P KT KE P D DW+YVR A+ILR +Y P+G++T I+GGR+ G
Sbjct: 27 VKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRG 86
Query: 178 VTPSHFCRSSGSIARKALQSLEALKLLRKF----RTVVAFSPHKVDETLTESLPRFV 336
P HF ++ GS+ RK LQ LE L+ K RT+ +D T E + V
Sbjct: 87 SAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREIMEELV 143
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 79.8 bits (188), Expect = 2e-14
Identities = 35/91 (38%), Positives = 55/91 (60%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+++PE +D VKT KELAP +PDW Y+R AAI R +Y+ + +GV + + +G +
Sbjct: 29 LEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHY 88
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRKFRT 273
PSH SG + R LQ LE + ++ K ++
Sbjct: 89 YPSHRTLGSGKVNRYILQQLEKMGIVGKIQS 119
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 75.8 bits (178), Expect = 3e-13
Identities = 39/88 (44%), Positives = 51/88 (57%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+K+PE +VKT KE +P D DW YVR AA+ R IY+R GV +T +FG NG
Sbjct: 80 IKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKIYVRGHWGVGNLTHMFGSVNDNGK 139
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
S SG + R LQ LE +K+L+K
Sbjct: 140 HES----GSGKVIRYLLQQLETIKVLKK 163
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 74.1 bits (174), Expect = 1e-12
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+ P + VKT + P + DW++ RCA+I+R IY+ P+G+ + K +GG K +G
Sbjct: 25 IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGY 84
Query: 181 TPSHFCRSSGSIARKALQSLEAL----KLLRKFRTVVAFSPHKVDETLTESLPRFV 336
+H + G+I R A+ LE L K+ +K R V K+D TE L +
Sbjct: 85 GAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIVSKQGMQKLDRLATEILKEMI 140
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 73.3 bits (172), Expect = 2e-12
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 7 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 186
VP +++K++ +E AP +PDW+Y+RCAA+LR IY+R VG ++K FG +K G P
Sbjct: 55 VPNCTEIMKSSHGRERAPQNPDWYYIRCAAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRP 114
Query: 187 SHFCRSSGSIARKALQSLEALKLL 258
H SS A +SL L L+
Sbjct: 115 EHTVTSSTGPLHWACKSLTKLGLV 138
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 72.9 bits (171), Expect = 2e-12
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+ +PE T+ +ELAP D DW Y+R AA+ R +Y++ G+ T+ IFG K G
Sbjct: 32 LSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKVYLKPHTGISTLKHIFGSNKDRGN 91
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
+ G I R AL+SLE LK++RK
Sbjct: 92 LRNKHQACHGKILRWALKSLEDLKIIRK 119
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 72.9 bits (171), Expect = 2e-12
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+ P+ + VKT + ++LAP D DW++++ ++ILR +YI +GV + + F ++R GV
Sbjct: 72 ITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGV 131
Query: 181 TPSHFCRSSGSIARKALQSLE 243
P+H +SG I R LQ LE
Sbjct: 132 APNHTSLASGKILRSILQQLE 152
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 66.5 bits (155), Expect = 2e-10
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Frame = +1
Query: 10 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 189
P+ + VKT + P D W++ RCA+++R IY+ P+G+ + +GG K G +
Sbjct: 22 PDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAA 81
Query: 190 HFCRSSGSIARKALQSLEAL----KLLRKFRTVVAFSPHKVDETLTESL 324
+ ++ G+I R A+ LE L KL +K R V K+D TE L
Sbjct: 82 NHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKLDRLSTEIL 130
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 65.3 bits (152), Expect = 4e-10
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+ + + +G +
Sbjct: 35 IRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYLHHDASLSGLAFHYGANMKAVT 94
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLR 261
P H +S + R LQ LE L+R
Sbjct: 95 MPKHHHEASRKVIRTILQQLEKAGLVR 121
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 63.3 bits (147), Expect = 2e-09
Identities = 33/97 (34%), Positives = 49/97 (50%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+K P + VKT KE P DW YVR A++LR +YI +G+ ++ +GG+ G
Sbjct: 26 IKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGS 85
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRKFRTVVAFSP 291
H S SI R LE+ L++K + + SP
Sbjct: 86 KRYHAASGSRSITRFLFHELESAGLVQKTQKGRSLSP 122
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 60.1 bits (139), Expect = 2e-08
Identities = 37/88 (42%), Positives = 47/88 (53%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+KVPE +D VK A+ KELAPY+ +WFY R A+ RH V
Sbjct: 173 LKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH----------------------RV 210
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSHF R S S A + LQ+LE LK++ K
Sbjct: 211 RPSHFSRGSKSAACRVLQALEGLKMVEK 238
Score = 39.5 bits (88), Expect = 0.025
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 243 GIEAVEKVQDGGRILTTQGRRDLDRI 320
G++ VEK QDGGR L QG+RDLDRI
Sbjct: 232 GLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 54.8 bits (126), Expect = 6e-07
Identities = 24/88 (27%), Positives = 50/88 (56%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+ +P +++ K++ K+ +P +W + R A+I+ YI +G + + +I+ G+K+
Sbjct: 27 INIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFYIYKKLGTRQLVRIYNGKKKG-- 84
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
S SG I R +++ LE +K+L+K
Sbjct: 85 RRSKKTNGSGKIIRFSIKELEKMKILKK 112
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 50.4 bits (115), Expect = 1e-05
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 10 PEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN----G 177
P+ ++ K+ KEL P D++YVR A++LR + P+G++ + +G +KR
Sbjct: 39 PDWVEFAKSGAGKELPPEQEDFWYVRSASLLRKVAQNEPIGIERLATEYGSKKRGSNRYS 98
Query: 178 VTPSHFCRSSGSIARKALQSLE 243
V P S + R +LQ+LE
Sbjct: 99 VRPGEHEGGSRKLIRASLQALE 120
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 160 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 252
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_A5DI62 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 926
Score = 35.5 bits (78), Expect = 0.42
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 115 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLLR-KFRTVVAFSP 291
I++ V + + + F VT F S G ARK L +E K K T V P
Sbjct: 128 IKNAVNITNLEQKFYDEGIKSVTAKEFLASFGPSARKTLLKVETDKRDNSKTSTEVVPEP 187
Query: 292 HKVDETLTESLPRFV*RPSSRLSNKS 369
VDE +TE +P + S++ N +
Sbjct: 188 IIVDEDITEDIPEDIMEVESKIYNNA 213
>UniRef50_Q4CV28 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 2731
Score = 35.1 bits (77), Expect = 0.55
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Frame = +1
Query: 19 MDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGV-KTVTKIFGGRKRNG----VT 183
M+ +KTA +L P+WF+V C + R+ G+ K + I +K G VT
Sbjct: 595 MNTLKTAVACKLLCRHPEWFFVPCMIDPVEMMQRAANGIEKELMTISASKKETGIMHFVT 654
Query: 184 PSHFCRSSGSIARKALQSLEA-LKLLRKFRTVVAFSPHKVDETLTESLPRFV*RPSSR 354
+ R + ++Q L A L F + FS H D E+L R +P +
Sbjct: 655 TAEAKRRRLDVLTSSIQQLTATLAERHAFERQLVFSWHHADRASREALVRTWAKPKKK 712
>UniRef50_Q24FW2 Cluster: Von Willebrand factor type A domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Von Willebrand factor type A domain
containing protein - Tetrahymena thermophila SB210
Length = 1074
Score = 35.1 bits (77), Expect = 0.55
Identities = 28/81 (34%), Positives = 38/81 (46%)
Frame = +1
Query: 127 VGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLLRKFRTVVAFSPHKVDE 306
V +T+ +F K N S +S I R Q L+ LKLL K SPHK +
Sbjct: 206 VVAQTMQYVFNSNKANQSMHSSVRQSQSPINRNNQQQLQNLKLLNKSTNSSLQSPHKKMQ 265
Query: 307 TLTESLPRFV*RPSSRLSNKS 369
T P + + ++RLSNKS
Sbjct: 266 ASTYD-P--IQQQANRLSNKS 283
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 0.73
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 149 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 247
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_A6NIY6 Cluster: Uncharacterized protein MAN1B1; n=2; Homo
sapiens|Rep: Uncharacterized protein MAN1B1 - Homo
sapiens (Human)
Length = 865
Score = 32.7 bits (71), Expect = 2.9
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +2
Query: 59 RMTLIGSMCVVLPSFVIFTFAHLLESRLSPRSLVGANVMEL-HLHISAGHQAVLHARLCN 235
R + I ++ V V FT L +L G V + H+ + A VLH+ C
Sbjct: 757 RWSYIHTVAGVQVGGVTFTLLQACRLVLHTFTLAGVQVGGVTHMLLQACRSVVLHSHCCR 816
Query: 236 R----WRH*SC*ESSGRWSHSH 289
R + H C +GRW ++H
Sbjct: 817 RAGRWYTHSHCCRRAGRWCYTH 838
>UniRef50_Q7RWL8 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 396
Score = 32.7 bits (71), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 308 VSSTLCGENATTVLNFLNSFNASNDCKALRAILPDDLQKCEGVTPLRL 165
+S +L ENATT+ + + SF +S+ + LR DL + + V LRL
Sbjct: 77 MSESLATENATTISDSIFSFESSSSSEDLRFCDSSDLNELDKVERLRL 124
>UniRef50_Q6C7K7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 611
Score = 32.3 bits (70), Expect = 3.9
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRKFRTVVAFSPHKVDETLTESL 324
TP+ + G AR A+Q L LLR T +PH++DE + E L
Sbjct: 409 TPAKISPAKGPAARMAVQKHNPLTLLRPEFTPWVENPHQLDEPIQEYL 456
>UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n=3;
Marinomonas sp. MWYL1|Rep: Peptidoglycan-binding LysM
precursor - Marinomonas sp. MWYL1
Length = 963
Score = 31.9 bits (69), Expect = 5.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 19 MDLVKTARFKELAPYDPDWF-YVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 189
+DL+ R++ + + D F + R AA+ RH +G+ TK G+ N +TP+
Sbjct: 590 VDLIDKKRYQSITHFSFDVFGFSRGAALARHFVNALKMGLPDYTKHRSGKDTNRITPN 647
>UniRef50_A6S452 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 654
Score = 31.9 bits (69), Expect = 5.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 209 PDDLQKCEGVTPLRLRPPKILVTVLTP 129
PDD+++ E + P LRP ++L T + P
Sbjct: 453 PDDIERTENIPPQPLRPKRVLKTTIIP 479
>UniRef50_Q6PBF7 Cluster: Transmembrane protein 85; n=4;
Deuterostomia|Rep: Transmembrane protein 85 - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 180
Score = 31.5 bits (68), Expect = 6.8
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -3
Query: 375 VQ*LVA*PAAWPL-DEPGQRFCQGLVYLV 292
+Q L+A PA + L + GQRF QGLVYL+
Sbjct: 107 IQALLATPATFKLLESSGQRFLQGLVYLI 135
>UniRef50_A6QV20 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 666
Score = 31.1 bits (67), Expect = 8.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 59 RMTLIGSMCVVLPSFVIFTFAHLLESRLSPRS 154
R+ LIGS+C + P+F +F+ AH + P++
Sbjct: 20 RLALIGSVCQLRPAFSLFSGAHAHHTSTGPKA 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,282,737
Number of Sequences: 1657284
Number of extensions: 7226708
Number of successful extensions: 19756
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 19256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19748
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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