Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30417
         (407 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   0.66 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   0.66 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.66 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.66 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   2.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   4.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   4.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   8.1  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 230 KALRAILPDDLQKCEGVTPLRLRPPKILVT 141
           ++L +I+ +   K  G T +R+RPPK+  T
Sbjct: 63  ESLASIIDEAATKVHGTT-VRVRPPKVYPT 91


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 230 KALRAILPDDLQKCEGVTPLRLRPPKILVT 141
           ++L +I+ +   K  G T +R+RPPK+  T
Sbjct: 377 ESLASIIDEAATKVHGTT-VRVRPPKVYPT 405


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 230 KALRAILPDDLQKCEGVTPLRLRPPKILVT 141
           ++L +I+ +   K  G T +R+RPPK+  T
Sbjct: 610 ESLASIIDEAATKVHGTT-VRVRPPKVYPT 638


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 230 KALRAILPDDLQKCEGVTPLRLRPPKILVT 141
           ++L +I+ +   K  G T +R+RPPK+  T
Sbjct: 610 ESLASIIDEAATKVHGTT-VRVRPPKVYPT 638


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -1

Query: 248 NASNDCKALRAILPDDLQKCEGV-TPLRLRPPKI 150
           N + DC   + +LPD     +G   P +L P  +
Sbjct: 157 NRAPDCDPTQCVLPDCFCSADGTRIPGQLEPANV 190


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 219 TQGFAIVGGIEAVEKVQD 272
           T G  ++G  + +EK+ D
Sbjct: 291 TAGTTVIGAFDPIEKIAD 308


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -2

Query: 199 CRNVKV*LHYVCAHQRSW*QS*LQQVSECKYDEGWQHNAHRTNQ 68
           C N++      C+    W    L +  +C Y EGW   +   +Q
Sbjct: 200 CDNLQYSFDNQCSGTIDWA---LPKQEDCFYQEGWNGQSFDVSQ 240


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 158 VGANVMELH-LHISAGHQAVLHARLCNRWRH*SC*ESSGRWSHSH 289
           + A V   H L +S+ HQA+LH    N   H    E SG  S +H
Sbjct: 327 LSAMVNRCHPLSLSSDHQAMLHH---NPMSHHLKQEPSGFTSSNH 368


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 187 SHFCRSSGSI 216
           +HFCR+ GS+
Sbjct: 312 THFCRTLGSL 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,372
Number of Sequences: 336
Number of extensions: 1875
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)