Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30417
(407 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 146 1e-35
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 146 1e-35
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 146 1e-35
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 146 1e-35
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 146 1e-35
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 146 1e-35
AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p pro... 115 3e-26
AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB... 115 3e-26
AY052019-1|AAK93443.1| 794|Drosophila melanogaster LD47515p pro... 27 7.2
AE013599-1156|AAF58765.2| 794|Drosophila melanogaster CG11887-P... 27 7.2
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 146 bits (354), Expect = 1e-35
Identities = 63/88 (71%), Positives = 77/88 (87%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV
Sbjct: 28 LKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGV 87
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSHFCR++ ARKALQ+LE +L+ K
Sbjct: 88 HPSHFCRAADGAARKALQALEHARLVEK 115
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VEKVQDGGRILTTQGRRDLDRI 320
VEK DGGR L++ G+RDLDRI
Sbjct: 113 VEKHPDGGRKLSSIGQRDLDRI 134
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 146 bits (354), Expect = 1e-35
Identities = 63/88 (71%), Positives = 77/88 (87%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV
Sbjct: 28 LKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGV 87
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSHFCR++ ARKALQ+LE +L+ K
Sbjct: 88 HPSHFCRAADGAARKALQALEHARLVEK 115
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VEKVQDGGRILTTQGRRDLDRI 320
VEK DGGR L++ G+RDLDRI
Sbjct: 113 VEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 146 bits (354), Expect = 1e-35
Identities = 63/88 (71%), Positives = 77/88 (87%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV
Sbjct: 28 LKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGV 87
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSHFCR++ ARKALQ+LE +L+ K
Sbjct: 88 HPSHFCRAADGAARKALQALEHARLVEK 115
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VEKVQDGGRILTTQGRRDLDRI 320
VEK DGGR L++ G+RDLDRI
Sbjct: 113 VEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 146 bits (354), Expect = 1e-35
Identities = 63/88 (71%), Positives = 77/88 (87%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV
Sbjct: 28 LKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGV 87
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSHFCR++ ARKALQ+LE +L+ K
Sbjct: 88 HPSHFCRAADGAARKALQALEHARLVEK 115
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VEKVQDGGRILTTQGRRDLDRI 320
VEK DGGR L++ G+RDLDRI
Sbjct: 113 VEKHPDGGRKLSSIGQRDLDRI 134
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 146 bits (354), Expect = 1e-35
Identities = 63/88 (71%), Positives = 77/88 (87%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+KVP+ MD+VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV
Sbjct: 28 LKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGV 87
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSHFCR++ ARKALQ+LE +L+ K
Sbjct: 88 HPSHFCRAADGAARKALQALEHARLVEK 115
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VEKVQDGGRILTTQGRRDLDRI 320
VEK DGGR L++ G+RDLDRI
Sbjct: 113 VEKHPDGGRKLSSIGQRDLDRI 134
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 146 bits (353), Expect = 1e-35
Identities = 62/88 (70%), Positives = 77/88 (87%)
Frame = +1
Query: 1 VKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGV 180
+KVP+ MD++KTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV ++TKI+GGRKRNGV
Sbjct: 28 LKVPDQMDIIKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGV 87
Query: 181 TPSHFCRSSGSIARKALQSLEALKLLRK 264
PSHFCR++ ARKALQ+LE +L+ K
Sbjct: 88 HPSHFCRAADGAARKALQALEHARLVEK 115
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VEKVQDGGRILTTQGRRDLDRI 320
VEK DGGR L++ G+RDLDRI
Sbjct: 113 VEKHPDGGRKLSSIGQRDLDRI 134
>AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p
protein.
Length = 155
Score = 115 bits (276), Expect = 3e-26
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = +1
Query: 7 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 186
VPE +KT +FKE AP D DWFY RCA+I+RH+Y+RSP GV TK++ GRKRNGV P
Sbjct: 30 VPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRP 89
Query: 187 SHFCRSSGSIARKALQSLEALKLLRK 264
S CRSS RKALQ+LEA ++ +
Sbjct: 90 SKHCRSSDGCIRKALQALEAANMVER 115
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VEKVQDGGRILTTQGRRDLDRI 320
VE+ DGGR LT QG+R+LDRI
Sbjct: 113 VERHPDGGRKLTPQGQRNLDRI 134
>AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB
protein.
Length = 155
Score = 115 bits (276), Expect = 3e-26
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = +1
Query: 7 VPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTP 186
VPE +KT +FKE AP D DWFY RCA+I+RH+Y+RSP GV TK++ GRKRNGV P
Sbjct: 30 VPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRP 89
Query: 187 SHFCRSSGSIARKALQSLEALKLLRK 264
S CRSS RKALQ+LEA ++ +
Sbjct: 90 SKHCRSSDGCIRKALQALEAANMVER 115
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 255 VEKVQDGGRILTTQGRRDLDRI 320
VE+ DGGR LT QG+R+LDRI
Sbjct: 113 VERHPDGGRKLTPQGQRNLDRI 134
>AY052019-1|AAK93443.1| 794|Drosophila melanogaster LD47515p
protein.
Length = 794
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 187 SHFCRSSGSIARKALQSLEA-LKLLRKFRTVVAFSPHKVDETLTESLPRFV*RPSSRLSN 363
S + +SG+ K +++ +A + FR + + L +SLP+ PS LSN
Sbjct: 445 SRYKFASGA-EEKIVRTFQAPANFIENFRHISGIENDDAGDVLLDSLPKGASVPSLGLSN 503
Query: 364 KSLY 375
K++Y
Sbjct: 504 KAVY 507
>AE013599-1156|AAF58765.2| 794|Drosophila melanogaster CG11887-PA
protein.
Length = 794
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 187 SHFCRSSGSIARKALQSLEA-LKLLRKFRTVVAFSPHKVDETLTESLPRFV*RPSSRLSN 363
S + +SG+ K +++ +A + FR + + L +SLP+ PS LSN
Sbjct: 445 SRYKFASGA-EEKIVRTFQAPANFIENFRHISGIENDDAGDVLLDSLPKGASVPSLGLSN 503
Query: 364 KSLY 375
K++Y
Sbjct: 504 KAVY 507
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,158,109
Number of Sequences: 53049
Number of extensions: 360047
Number of successful extensions: 813
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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