Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30416
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.6  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   5.6  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   5.6  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.8  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +2

Query: 344 KHVR--RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 475
           KHV+  +   +LK  +VC+     +  +RVV  GI  SGL L +GP
Sbjct: 109 KHVKFCQFAFDLKCDSVCV---NPYHYERVVSPGIDLSGLTLQSGP 151


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 433 CWNSAQRSAFSYWTFCFQF-VPATP-YSQRYVIG 528
           CW+ A++   + W+F   F +P T  Y +R + G
Sbjct: 337 CWSRARKLVAAAWSFSILFSLPITYFYEERLIQG 370


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 402 LVDMQARGLYLLEFCPAVCF*LLDL-LLSIRARYAVFSALCDRHLHQN 542
           ++DM+A  + L +    VC  +++   L + AR  V  AL  RH HQ+
Sbjct: 169 MLDMEA--VSLEQIAELVCENMVNSGTLPVEARDKVIDALLKRHKHQH 214


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 280 TFEGYCSGSPFFSP 239
           +FEG C+  PF++P
Sbjct: 82  SFEGDCNEKPFYAP 95


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,091
Number of Sequences: 2352
Number of extensions: 15631
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)