Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30415
(590 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 210 2e-53
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 126 3e-28
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 123 3e-27
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 122 5e-27
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 122 6e-27
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 113 2e-24
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 111 9e-24
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 108 8e-23
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 108 1e-22
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 107 1e-22
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 107 3e-22
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 105 1e-21
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 104 1e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 104 2e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 102 5e-21
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 101 2e-20
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 100 3e-20
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 99 4e-20
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 100 5e-20
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 99 7e-20
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 3e-19
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 95 1e-18
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 95 1e-18
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 94 3e-18
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 91 2e-17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 91 2e-17
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 90 3e-17
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 88 2e-16
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 86 5e-16
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 83 5e-15
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 81 1e-14
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 81 2e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 81 3e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 80 3e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 78 1e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 75 9e-13
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 74 2e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 74 2e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 73 4e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 4e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 4e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 73 4e-12
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 73 5e-12
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 73 5e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 73 7e-12
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 73 7e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 72 1e-11
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 70 4e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 70 5e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 69 8e-11
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 68 2e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 67 3e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 66 6e-10
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 65 1e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 65 1e-09
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 65 1e-09
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 65 1e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 65 1e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 65 1e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 64 2e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 64 2e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 3e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 64 3e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 63 5e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 63 5e-09
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 63 5e-09
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 62 7e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 62 9e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 62 1e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 61 2e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 61 2e-08
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 60 3e-08
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 60 3e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 5e-08
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 59 9e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 59 9e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 58 1e-07
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 58 1e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 58 2e-07
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 57 3e-07
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 57 3e-07
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 57 4e-07
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 57 4e-07
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 56 8e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 55 1e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 53 4e-06
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 53 6e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 52 1e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 51 2e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 2e-05
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 49 7e-05
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 49 7e-05
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 5e-04
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 46 9e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 46 9e-04
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 45 0.002
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 43 0.006
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 41 0.025
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 41 0.025
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 38 0.18
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 37 0.41
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 0.94
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 36 0.94
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.6
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.6
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 34 2.9
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 2.9
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 33 5.0
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 5.0
UniRef50_Q7VG68 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
UniRef50_Q74DA6 Cluster: Sodium/bile acid symporter family prote... 32 8.7
UniRef50_A7IFN8 Cluster: Putative uncharacterized protein precur... 32 8.7
UniRef50_Q8I2P3 Cluster: Putative uncharacterized protein PFI130... 32 8.7
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 210 bits (513), Expect = 2e-53
Identities = 101/144 (70%), Positives = 110/144 (76%)
Frame = +1
Query: 10 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 189
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 190 NLCYTSNWVIRIHCLSSSYIH*GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 369
NLCY SNW+I I+CLSSSYI+ YFTSAT+IIAVPTGIKIF LAT HGTQIN
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQIN 126
Query: 370 YNPNIL*RLGFVFLFTVGGLTGGI 441
Y+P+IL LGFVFLFTVGGLTG I
Sbjct: 127 YSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 126 bits (305), Expect = 3e-28
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF
Sbjct: 195 TDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGM 254
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
FIV AHH+FT
Sbjct: 255 LGMIYAMLTIGFLGFIVWAHHMFT 278
Score = 103 bits (246), Expect = 4e-21
Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTVGGLTG
Sbjct: 280 GMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTG 339
Query: 436 GILANSS-HWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIPFIY 579
+L+NSS VLH T+YG A GA + + GGFI P +
Sbjct: 340 VVLSNSSVDVVLH--DTYYGVAHFHYVLSMGAVF-SILGGFIYWFPMFF 385
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 123 bits (297), Expect = 3e-27
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F
Sbjct: 211 TDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGY 270
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
FIV AHH+FT
Sbjct: 271 MGMVWAMMAIGLLGFIVWAHHMFT 294
Score = 101 bits (242), Expect = 1e-20
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG
Sbjct: 296 GMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTG 355
Query: 436 GILANSS-HWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIP 570
+LANSS VLH T+Y A GA + + GF++ P
Sbjct: 356 IVLANSSLDIVLH--DTYYVVAHFHYVLSMGAVF-AIMAGFVHWFP 398
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 122 bits (295), Expect = 5e-27
Identities = 57/84 (67%), Positives = 62/84 (73%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 211 TDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGY 270
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
FIV AHH+FT
Sbjct: 271 MGMVWAMMSIGFLGFIVWAHHMFT 294
Score = 105 bits (253), Expect = 6e-22
Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG
Sbjct: 296 GMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTG 355
Query: 436 GILANSS-HWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIP 570
+LANSS VLH T+Y A GA + + GGFI+ P
Sbjct: 356 IVLANSSLDIVLH--DTYYVVAHFHYVLSMGAVF-AIMGGFIHWFP 398
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 122 bits (294), Expect = 6e-27
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 211 TDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGY 270
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
FIV AHH+FT
Sbjct: 271 MGMVWAMMAIGLLGFIVWAHHMFT 294
Score = 101 bits (242), Expect = 1e-20
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG
Sbjct: 296 GMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTG 355
Query: 436 GILANSS-HWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIP 570
+LANSS VLH T+Y A GA + + GF++ P
Sbjct: 356 IVLANSSIDIVLH--DTYYVVAHFHYVLSMGAVF-AIMAGFVHWFP 398
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 113 bits (273), Expect = 2e-24
Identities = 55/84 (65%), Positives = 59/84 (70%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K F
Sbjct: 214 TDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGY 272
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
F+V AHH+FT
Sbjct: 273 LGMVYAMISIGVLGFLVWAHHMFT 296
Score = 92.7 bits (220), Expect = 6e-18
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG
Sbjct: 298 GLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTG 357
Query: 436 GILANS 453
+LANS
Sbjct: 358 IVLANS 363
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 111 bits (268), Expect = 9e-24
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 175
TDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 212 TDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +1
Query: 340 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILANSS 456
LAT+HG I ++P +L LGF+FLFTVGGLTG +LANSS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSS 363
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 108 bits (260), Expect = 8e-23
Identities = 56/75 (74%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTG
Sbjct: 209 GMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTG 268
Query: 436 GILANSS-HWVLHYT 477
+LANSS VLH T
Sbjct: 269 VVLANSSIDIVLHDT 283
Score = 63.3 bits (147), Expect = 4e-09
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +2
Query: 95 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 253
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFT 207
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 108 bits (259), Expect = 1e-22
Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
Frame = +1
Query: 259 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGG 438
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTG
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 439 ILANSS-HWVLHYT 477
+LANSS VLH T
Sbjct: 61 VLANSSLDIVLHDT 74
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 107 bits (258), Expect = 1e-22
Identities = 52/84 (61%), Positives = 58/84 (69%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F
Sbjct: 219 TDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGY 277
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
FIV AHH++T
Sbjct: 278 IGMVYAMVSIGVLGFIVWAHHMYT 301
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/66 (63%), Positives = 53/66 (80%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+GGLTG
Sbjct: 303 GLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTG 362
Query: 436 GILANS 453
+LANS
Sbjct: 363 IVLANS 368
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 107 bits (256), Expect = 3e-22
Identities = 49/83 (59%), Positives = 58/83 (69%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F
Sbjct: 211 TDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGY 269
Query: 182 XXXXXXXXXXXXXXFIV*AHHIF 250
F+V +HH++
Sbjct: 270 LGMVYAMFSIGILGFLVWSHHMY 292
Score = 90.6 bits (215), Expect = 2e-17
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+GGLTG
Sbjct: 295 GLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTG 354
Query: 436 GILANSS 456
ILAN+S
Sbjct: 355 VILANAS 361
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 105 bits (251), Expect = 1e-21
Identities = 58/106 (54%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG
Sbjct: 61 GMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTG 120
Query: 436 GILANSS-HWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIP 570
ILANSS VLH T+Y A GA + + GGF++ P
Sbjct: 121 IILANSSLDIVLH--DTYYVVAHFHYVLSMGAVF-AIMGGFVHWFP 163
Score = 69.7 bits (163), Expect = 5e-11
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = +2
Query: 80 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 253
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FT
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFT 59
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 104 bits (250), Expect = 1e-21
Identities = 48/81 (59%), Positives = 56/81 (69%)
Frame = +2
Query: 11 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 190
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 191 XXXXXXXXXXXFIV*AHHIFT 253
F+V AHH+FT
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFT 271
Score = 95.1 bits (226), Expect = 1e-18
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT+GGLTG
Sbjct: 273 GMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLTG 332
Query: 436 GILANSS-HWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIP 570
+LANSS VLH T+Y A GA + ++ GF + P
Sbjct: 333 IVLANSSIDVVLH--DTYYVVAHFHYVLSMGAVF-AIFAGFTHWFP 375
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 104 bits (249), Expect = 2e-21
Identities = 49/83 (59%), Positives = 56/83 (67%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK F
Sbjct: 216 DRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHV 274
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
FIV AHH++T
Sbjct: 275 PMIAAMLMIGLIGFIVWAHHMYT 297
Score = 74.1 bits (174), Expect = 2e-12
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLT 432
GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+GG+T
Sbjct: 299 GIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGIT 357
Query: 433 GGILANS 453
G IL+N+
Sbjct: 358 GIILSNA 364
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 102 bits (245), Expect = 5e-21
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F
Sbjct: 317 TDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGY 375
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
F+V AHH++T
Sbjct: 376 LPMVYALVAIGGLGFVVWAHHMYT 399
Score = 66.5 bits (155), Expect = 4e-10
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG TG
Sbjct: 401 GMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTG 460
Query: 436 GILANS 453
IL+ +
Sbjct: 461 IILSQA 466
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 101 bits (241), Expect = 2e-20
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K F
Sbjct: 212 TDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFGY 270
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
F+V +HH++T
Sbjct: 271 LGMVYAMCSIGILGFVVWSHHMYT 294
Score = 96.7 bits (230), Expect = 4e-19
Identities = 53/107 (49%), Positives = 74/107 (69%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GGL+G
Sbjct: 296 GLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSG 355
Query: 436 GILANSSHWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIPFI 576
+LAN+S + + T+Y A GA + L+ G+ IP I
Sbjct: 356 VVLANAS-LDIAFHDTYYVVAHFHYVLSMGAVF-ALFSGWYFWIPKI 400
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 100 bits (239), Expect = 3e-20
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK F
Sbjct: 213 DRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEI 271
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
F+V +HH++
Sbjct: 272 SMVYAMASIGLLGFLVWSHHMY 293
Score = 53.2 bits (122), Expect = 4e-06
Identities = 26/42 (61%), Positives = 29/42 (69%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 381
G+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 296 GLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 99 bits (238), Expect = 4e-20
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F
Sbjct: 238 TDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGY 296
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
FIV +HH++T
Sbjct: 297 LGMVYAMMSIGLLGFIVWSHHMYT 320
Score = 90.6 bits (215), Expect = 2e-17
Identities = 49/107 (45%), Positives = 71/107 (66%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL+G
Sbjct: 322 GLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSG 381
Query: 436 GILANSSHWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIPFI 576
+LAN+S + + T+Y A GA + L+ G+ IP I
Sbjct: 382 VVLANASENIA-FHDTYYVVAHFHYVLSMGAVF-ALFSGWYFWIPKI 426
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 99.5 bits (237), Expect = 5e-20
Identities = 48/84 (57%), Positives = 55/84 (65%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F
Sbjct: 254 TDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGY 312
Query: 182 XXXXXXXXXXXXXXFIV*AHHIFT 253
F+V AHH+FT
Sbjct: 313 LGMAYAMVAIGVVGFVVWAHHMFT 336
Score = 81.0 bits (191), Expect = 2e-14
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG+TG
Sbjct: 338 GMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTG 397
Query: 436 GILANSS-HWVLHYT 477
+LAN VLH T
Sbjct: 398 VVLANGGVDDVLHDT 412
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 99.1 bits (236), Expect = 7e-20
Identities = 46/82 (56%), Positives = 54/82 (65%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK F
Sbjct: 213 DRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEI 271
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
F+V +HH++
Sbjct: 272 SMVYAMASIGLLGFLVWSHHMY 293
Score = 88.6 bits (210), Expect = 9e-17
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTVGGLTG
Sbjct: 296 GLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTG 355
Query: 436 GILANSS 456
+LAN+S
Sbjct: 356 VVLANAS 362
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +1
Query: 262 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 426
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/82 (51%), Positives = 51/82 (62%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +F
Sbjct: 302 DRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYY 361
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
+V HH+F
Sbjct: 362 GLICAMASIVCLGSVVWGHHMF 383
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLT 432
G D T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLFTVGG+T
Sbjct: 386 GFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVT 445
Query: 433 GGILANSSHWVLHYTGTF 486
G L+ S+ +L + F
Sbjct: 446 GVALSASALDILFHDTWF 463
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 95.1 bits (226), Expect = 1e-18
Identities = 43/82 (52%), Positives = 52/82 (63%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K F
Sbjct: 215 DRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKI 274
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
F+V HH+F
Sbjct: 275 GMSWASMGIAWMGFLVWGHHMF 296
Score = 83.0 bits (196), Expect = 5e-15
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQINYNPNIL*RLGFVFLFTVGG 426
G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + + +P+ +G V LFT+GG
Sbjct: 299 GLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGG 358
Query: 427 LTGGILANSS-HWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIPF 573
LTG ILAN++ +LH ++Y A GA + ++GGF PF
Sbjct: 359 LTGVILANAALSTLLH--DSYYVVAHFHYVLSMGAVF-AIFGGFWFWFPF 405
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/54 (77%), Positives = 45/54 (83%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 163
TDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 237 TDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 85.8 bits (203), Expect = 7e-16
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT+GGL
Sbjct: 355 GLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGLLN 414
Query: 436 GIL 444
+L
Sbjct: 415 HLL 417
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 90.6 bits (215), Expect = 2e-17
Identities = 43/83 (51%), Positives = 53/83 (63%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 230 DRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKI 288
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F V +HH+FT
Sbjct: 289 GMIYAMASIGFLGFCVWSHHMFT 311
Score = 82.2 bits (194), Expect = 8e-15
Identities = 38/78 (48%), Positives = 58/78 (74%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+GG+TG
Sbjct: 313 GLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTG 372
Query: 436 GILANSSHWVLHYTGTFY 489
++ANSS ++ + T+Y
Sbjct: 373 VVIANSSLDIM-FHDTYY 389
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 90.6 bits (215), Expect = 2e-17
Identities = 43/83 (51%), Positives = 53/83 (63%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 230 DRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKI 288
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F V +HH+FT
Sbjct: 289 GMIYAMASIGFLGFCVWSHHMFT 311
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 90.2 bits (214), Expect = 3e-17
Identities = 52/102 (50%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLFTVGGL 429
G+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLFT+GGL
Sbjct: 261 GMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGGL 320
Query: 430 TGGILANSSHWVLHYTGTFYG*APIPICPPKGAQYLQLWGGF 555
TG +L+NSS +L + T+Y A GA + ++GGF
Sbjct: 321 TGIVLSNSSLDILLH-DTYYVVAHFHYVLSMGAVF-AIFGGF 360
Score = 59.7 bits (138), Expect = 5e-08
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFG 88
TDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 212 TDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLTG
Sbjct: 297 GMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLTG 356
Query: 436 GILANSS 456
+LANSS
Sbjct: 357 IVLANSS 363
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 86.2 bits (204), Expect = 5e-16
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 148
+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 217 SDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLT 432
G+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+ FT GG T
Sbjct: 301 GLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTT 360
Query: 433 GGILANSS 456
G IL N++
Sbjct: 361 GVILGNAA 368
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 83.0 bits (196), Expect = 5e-15
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 112
TDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 184 TDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 81.4 bits (192), Expect = 1e-14
Identities = 34/48 (70%), Positives = 41/48 (85%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 148
DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 218 DRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 52.8 bits (121), Expect = 6e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 208 NWVIRIHCLSSSYIH*GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNI 384
N +R+ L +SY+H YFT+ TI+IA+PTG KIF + T+ + I +
Sbjct: 285 NSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLV 344
Query: 385 L*RLGFVFLFTVGGLTGGILANS 453
L + F+ F +GG TG +L N+
Sbjct: 345 LFTVLFIVNFVIGGTTGVVLGNA 367
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 222 DRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQT 281
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
V HH++T
Sbjct: 282 SMTFASIWIAVLGTSVWGHHMYT 304
Score = 75.8 bits (178), Expect = 7e-13
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFTVGGL+G
Sbjct: 306 GLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSG 365
Query: 436 GIL-ANSSHWVLHYTGTFYG*APIPICPPKGAQYLQLWGGFINRIPFIY 579
IL A S +LH T+Y A GA Y ++ GF +P++Y
Sbjct: 366 IILSAASLDIILH--DTYYVVAHFHYTLSLGAIY-GIFCGFCLWLPYMY 411
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/82 (48%), Positives = 50/82 (60%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+ + G + F
Sbjct: 215 DRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTV 273
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
V AHH+F
Sbjct: 274 AMIYSMILIAILGMFVWAHHMF 295
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/65 (33%), Positives = 40/65 (61%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F +G +TG
Sbjct: 298 GMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTG 357
Query: 436 GILAN 450
L+N
Sbjct: 358 LFLSN 362
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 80.2 bits (189), Expect = 3e-14
Identities = 38/78 (48%), Positives = 47/78 (60%)
Frame = +2
Query: 20 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXX 199
TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I +K F
Sbjct: 228 TSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGYRAIAYS 286
Query: 200 XXXXXXXXFIV*AHHIFT 253
IV AHH+FT
Sbjct: 287 SLAISFLGLIVWAHHMFT 304
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +1
Query: 274 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILANS 453
R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +GGLT G++ S
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLT-GVMVAS 370
Query: 454 SHWVLHYTGTFY 489
+ +H T++
Sbjct: 371 VPFDIHVHDTYF 382
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 78.2 bits (184), Expect = 1e-13
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+K F
Sbjct: 267 DRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFK 324
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F V AHH+FT
Sbjct: 325 FVVYSTLAIGVLSFGVWAHHMFT 347
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
GID R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F +GG+TG
Sbjct: 349 GIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTG 408
Query: 436 GILA 447
LA
Sbjct: 409 VFLA 412
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 75.4 bits (177), Expect = 9e-13
Identities = 39/82 (47%), Positives = 47/82 (57%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 230 DRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYA 288
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
F+V AHH+F
Sbjct: 289 FVAYSGVAIGFLGFLVWAHHMF 310
Score = 56.0 bits (129), Expect = 6e-07
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +1
Query: 277 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILAN 450
A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG++G LA+
Sbjct: 320 AFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVTLAS 377
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 74.1 bits (174), Expect = 2e-12
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 145
TD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 195 TDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 66.9 bits (156), Expect = 3e-10
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLT 432
G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N ++ F+ F +GG +
Sbjct: 279 GLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTS 338
Query: 433 GGILANSSHWVLHYT-GTFY 489
G IL+N+S V HY T+Y
Sbjct: 339 GIILSNAS--VDHYLHDTYY 356
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 74.1 bits (174), Expect = 2e-12
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Frame = +2
Query: 5 DRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQE 154
DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS
Sbjct: 242 DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-T 300
Query: 155 RGKKETFXXXXXXXXXXXXXXXXFIV*AHHIF 250
+K F F+V AHH++
Sbjct: 301 HARKNIFGYRMMVWAIVAIGALSFVVWAHHMY 332
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +1
Query: 280 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILAN 450
+F + T+IIA+PT IK++ + T+ I+ +L LGF+ F GGLTG L N
Sbjct: 343 FFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGN 399
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 73.3 bits (172), Expect = 4e-12
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F
Sbjct: 224 DRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGRE 280
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
+ V AHH+FT
Sbjct: 281 GMMYCIISIGVVGYFVWAHHMFT 303
Score = 48.8 bits (111), Expect = 9e-05
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLT 432
G+DID+R+YF+ AT II++PT +K+F + T G N + F+ F GG T
Sbjct: 305 GLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGFT 364
Query: 433 GGILANSS 456
G +L++ S
Sbjct: 365 GLLLSSGS 372
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.3 bits (172), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +1
Query: 67 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 237
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 73.3 bits (172), Expect = 4e-12
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Frame = +2
Query: 5 DRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKE 169
+R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I Q ++
Sbjct: 217 ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRR 275
Query: 170 TFXXXXXXXXXXXXXXXXFIV*AHHIFTEV 259
+ F V HH+FT V
Sbjct: 276 AYGYTAIAISSVAIASISFAVWMHHMFTAV 305
Score = 48.8 bits (111), Expect = 9e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +1
Query: 262 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F VGG+TG
Sbjct: 307 DFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTG 364
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.3 bits (172), Expect = 4e-12
Identities = 40/82 (48%), Positives = 49/82 (59%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F
Sbjct: 299 DRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFK 355
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
F V AHH+F
Sbjct: 356 FVVYSTLAIGVLSFGVWAHHMF 377
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F +GG+TG
Sbjct: 380 GLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTG 439
Query: 436 GILAN-SSHWVLHYT 477
LA+ VLH T
Sbjct: 440 VFLASIPVDLVLHAT 454
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 72.9 bits (171), Expect = 5e-12
Identities = 37/82 (45%), Positives = 47/82 (57%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I +K +
Sbjct: 231 DRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYT 289
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
+ V AHH+F
Sbjct: 290 FVAASSVAIVLLGYGVWAHHMF 311
Score = 52.8 bits (121), Expect = 6e-06
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +GGLTG
Sbjct: 314 GLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTG 373
Query: 436 GILA 447
+ A
Sbjct: 374 IMFA 377
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 72.9 bits (171), Expect = 5e-12
Identities = 36/83 (43%), Positives = 47/83 (56%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K F
Sbjct: 221 DRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYS 279
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F+V HH+FT
Sbjct: 280 SMVFAIVLIGFLGFMVWVHHMFT 302
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/64 (43%), Positives = 38/64 (59%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +GG+TG
Sbjct: 304 GLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTG 363
Query: 436 GILA 447
+LA
Sbjct: 364 VMLA 367
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 72.5 bits (170), Expect = 7e-12
Identities = 35/82 (42%), Positives = 44/82 (53%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +K F
Sbjct: 238 DLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYR 296
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
IV AHH+F
Sbjct: 297 FVAIASFGITFLSLIVWAHHMF 318
Score = 42.3 bits (95), Expect(2) = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 274 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILA 447
R F T++IA+PTG+K+F L T+ + N +L +G + F G+TG +LA
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLA 384
Score = 21.4 bits (43), Expect(2) = 0.002
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +1
Query: 436 GILANSSHWVLHYTGTFY 489
G+ A HW +TG Y
Sbjct: 413 GVFAGIYHWFPKFTGKMY 430
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 72.5 bits (170), Expect = 7e-12
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 100
TDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 208 TDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
Score = 38.3 bits (85), Expect = 0.13
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2
Query: 326 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 427
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/54 (57%), Positives = 40/54 (74%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 166
DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 373 DRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR 426
Score = 36.7 bits (81), Expect = 0.41
Identities = 29/100 (29%), Positives = 49/100 (49%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D +R +++ TI+I++P IK+ ++ + + L + F+ LF V G TG
Sbjct: 456 GLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFTG 515
Query: 436 GILANSSHWVLHYTGTFYG*APIPICPPKGAQYLQLWGGF 555
L++ S V + TFY A I GA ++ GF
Sbjct: 516 MWLSHVSLNVSMH-DTFYVVAHFHIM-LSGAAITGIFSGF 553
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 70.1 bits (164), Expect = 4e-11
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 148
DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++
Sbjct: 228 DRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVA 275
Score = 48.8 bits (111), Expect = 9e-05
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +1
Query: 277 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILAN 450
++FT++++ IAVP G++IF LATI + + L +GF+ +F +GGLTG ++A+
Sbjct: 318 SFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVAS 375
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 69.7 bits (163), Expect = 5e-11
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +2
Query: 29 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 208
FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++ +K F
Sbjct: 246 FDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLG 304
Query: 209 XXXXXFIV*AHHIF 250
F HH+F
Sbjct: 305 IAFVGFFAWGHHMF 318
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILANSS 456
F T+I+ V T IK+F + T++ + + GF+F GG+TG L S
Sbjct: 330 FGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVS 387
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 68.9 bits (161), Expect = 8e-11
Identities = 36/83 (43%), Positives = 43/83 (51%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I +K F
Sbjct: 232 DRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLFGYS 290
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F V +HH+FT
Sbjct: 291 VMVFSTALIGFMGFTVWSHHMFT 313
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+GGL+G
Sbjct: 324 FSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSG 374
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.7 bits (158), Expect = 2e-10
Identities = 37/82 (45%), Positives = 44/82 (53%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 238 DRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYV 295
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
V AHH+F
Sbjct: 296 GLIFATLSIGALSMAVWAHHMF 317
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 280 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILAN 450
+F+ T +I+VPTG+K F + T+ I + ++ +GF+ F GGLTG +LA+
Sbjct: 326 FFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLAS 382
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
+R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 210 ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIFGYT 268
Query: 185 XXXXXXXXXXXXXFI-V*AHHIFTEV 259
+ V HH+FT +
Sbjct: 269 AIALSSIAIAFLSALGVWMHHMFTAI 294
Score = 45.6 bits (103), Expect = 9e-04
Identities = 17/50 (34%), Positives = 33/50 (66%)
Frame = +1
Query: 286 TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TG
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITG 353
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 66.1 bits (154), Expect = 6e-10
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 DRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS G K +
Sbjct: 221 DRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAK 277
Query: 182 XXXXXXXXXXXXXXFIV*AHHIF 250
F+V HH+F
Sbjct: 278 RYILTAFLIATIISFVVWMHHMF 300
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 145
D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 168 DKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+ TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F +GGLTG
Sbjct: 251 GVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTG 310
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +2
Query: 29 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 208
FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +K F
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLG 297
Query: 209 XXXXXFIV*AHHIFT 253
F HH+FT
Sbjct: 298 IAFVGFFTWGHHMFT 312
Score = 34.3 bits (75), Expect = 2.2
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILANSS-- 456
F ++ + + T IK+F AT++ I + GF+F GG+TG LA S
Sbjct: 323 FGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLD 382
Query: 457 -HW 462
HW
Sbjct: 383 VHW 385
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Frame = +2
Query: 5 DRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQE 154
DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI S +I+
Sbjct: 264 DRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-T 322
Query: 155 RGKKETFXXXXXXXXXXXXXXXXFIV*AHHIF 250
+K F FIV AHH+F
Sbjct: 323 NARKPIFGYKAMIGSILGIAVLSFIVWAHHMF 354
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILANSS 456
F T+IIAVP+ +K F + T+ I + P ++ +G V +F GG+TG IL N++
Sbjct: 366 FMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNA 423
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGH 91
TDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 130 TDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/83 (42%), Positives = 43/83 (51%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F
Sbjct: 252 DRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYK 310
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F+V HH FT
Sbjct: 311 AMVGSIIAISVLSFLVWTHHFFT 333
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G ++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +GG+TG
Sbjct: 335 GNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTG 394
Query: 436 GILA 447
+LA
Sbjct: 395 VMLA 398
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
Frame = +2
Query: 5 DRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 148
DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 245 DRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
Score = 39.1 bits (87), Expect = 0.076
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILANSS 456
F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG L + S
Sbjct: 342 FMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDIS 399
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F
Sbjct: 257 DRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHK 315
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F+V HH FT
Sbjct: 316 SMIYASGAISVLGFMVWLHHFFT 338
Score = 60.9 bits (141), Expect = 2e-08
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G + A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++GG+TG
Sbjct: 340 GSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMTG 399
Query: 436 GILA-NSSHWVLH 471
+LA + +VLH
Sbjct: 400 VLLAVPGADYVLH 412
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
+R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +K F
Sbjct: 222 ERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFGYR 280
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
+V AHH+FT
Sbjct: 281 QMVWAQMGIVVLGTMVWAHHMFT 303
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILA 447
F T +IAVPTG+K+F + T+ G ++ + LGF+F F +GG+TG +L+
Sbjct: 314 FAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLS 368
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/72 (41%), Positives = 39/72 (54%)
Frame = +2
Query: 35 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 214
P GGG +L+QHLF FFGHPEVYI ILP GI+SHI+ ++
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIG 328
Query: 215 XXXFIV*AHHIF 250
++V HH+F
Sbjct: 329 FLSYVVWGHHMF 340
Score = 39.9 bits (89), Expect = 0.044
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILANSS 456
F+ T+II +P + L +++G+++ N L LGF+ +F GG++G LA S
Sbjct: 352 FSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPS 409
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 63.7 bits (148), Expect = 3e-09
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 145
+R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 238 ERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
Score = 50.0 bits (114), Expect = 4e-05
Identities = 25/67 (37%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGG 426
GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FTVGG
Sbjct: 321 GIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGG 379
Query: 427 LTGGILA 447
+TG ++A
Sbjct: 380 VTGVMVA 386
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.9 bits (146), Expect = 5e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
+R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K F
Sbjct: 254 ERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYG 312
Query: 185 XXXXXXXXXXXXXFIV*AHHIF 250
F + AHH+F
Sbjct: 313 FAVAAVVTMSFLSFGLWAHHMF 334
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/64 (35%), Positives = 43/64 (67%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +GG+TG
Sbjct: 337 GLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTG 396
Query: 436 GILA 447
++A
Sbjct: 397 VMVA 400
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 62.9 bits (146), Expect = 5e-09
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 136
DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 248 DRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
Score = 40.7 bits (91), Expect = 0.025
Identities = 19/57 (33%), Positives = 36/57 (63%)
Frame = +1
Query: 277 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILA 447
A+F +A+++I++P+ + +F +ATI + + L GFV +F VGG++G + A
Sbjct: 338 AFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTA 394
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 62.9 bits (146), Expect = 5e-09
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFTVGGL 429
G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT GG
Sbjct: 5 GLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGT 63
Query: 430 TGGILANSS 456
TG IL N +
Sbjct: 64 TGVILGNGA 72
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 62.5 bits (145), Expect = 7e-09
Identities = 34/83 (40%), Positives = 43/83 (51%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+ F
Sbjct: 256 DRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHH 314
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F V HH FT
Sbjct: 315 SMIYASGAIAVLGFAVWLHHFFT 337
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G +F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F++GG+TG
Sbjct: 339 GAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTG 398
Query: 436 GILA-NSSHWVLH 471
+LA + +VLH
Sbjct: 399 VLLAVPGADFVLH 411
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 62.1 bits (144), Expect = 9e-09
Identities = 36/83 (43%), Positives = 42/83 (50%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 251 DRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYI 309
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F+V HH FT
Sbjct: 310 SLIYATISITVLSFLVWLHHFFT 332
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/56 (35%), Positives = 36/56 (64%)
Frame = +1
Query: 280 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILA 447
+F+ +T+IIA+PTG+KIF + TI + + + F+ +F++GG +G IL+
Sbjct: 342 FFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILS 397
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 145
DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 235 DRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/57 (36%), Positives = 41/57 (71%)
Frame = +1
Query: 280 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILAN 450
+FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +GGL+G ++A+
Sbjct: 325 FFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVAS 381
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 145
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
Score = 40.7 bits (91), Expect = 0.025
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+ + +F++A+ + +PTGI++F +AT+ ++ +L G + +FT GGLTG
Sbjct: 337 GLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTG 396
Query: 436 GILANSS-HWVLHYT 477
++A + W +H T
Sbjct: 397 VMVAIAPFDWQVHDT 411
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +2
Query: 38 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 217
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++ +K F
Sbjct: 272 AGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAG 330
Query: 218 XXFIV*AHHIF 250
FIV HH+F
Sbjct: 331 LGFIVWGHHMF 341
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/55 (38%), Positives = 36/55 (65%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILA 447
F AT++IA+P+ +K F L T++G ++ + +L L FV +F +GGL+G +A
Sbjct: 353 FMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMA 407
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 145
+R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 297 ERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
Score = 40.3 bits (90), Expect = 0.033
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVFLFTVG 423
GI + ++F +A+ +A+P+G+++F +AT + I L LGF+F+F +G
Sbjct: 380 GIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLG 439
Query: 424 GLTGGILA 447
GLTG ++A
Sbjct: 440 GLTGVMVA 447
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 60.5 bits (140), Expect = 3e-08
Identities = 34/83 (40%), Positives = 42/83 (50%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S G K F
Sbjct: 276 DRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYK 334
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F+V HH FT
Sbjct: 335 SLVWATISIAFLSFLVWLHHFFT 357
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +1
Query: 277 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILAN 450
A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +GG+TG +LAN
Sbjct: 366 AVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLAN 423
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/83 (37%), Positives = 44/83 (53%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXX 181
TDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++ + +K +
Sbjct: 213 TDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSY 271
Query: 182 XXXXXXXXXXXXXXFIV*AHHIF 250
F AHH+F
Sbjct: 272 NSGLFAFVLLTIVGFSSWAHHMF 294
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 59.7 bits (138), Expect = 5e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 145
+R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 228 ERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 39.9 bits (89), Expect = 0.044
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 277 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILA-NS 453
A+F++A+ ++AVPT +++F + T+ + +L L F F +GGLTG ++A
Sbjct: 318 AFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVP 377
Query: 454 SHWVLHYT 477
W +H T
Sbjct: 378 FDWQVHDT 385
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 58.8 bits (136), Expect = 9e-08
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 41 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 220
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASL 334
Query: 221 XFIV*AHHIFT 253
FIV HH+FT
Sbjct: 335 GFIVWGHHMFT 345
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILA 447
F +T++IA+P+ IK F ATI G ++ +N L + F+ +F VGGL+G +A
Sbjct: 356 FMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMA 410
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.8 bits (136), Expect = 9e-08
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 115
DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 218 DRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/83 (38%), Positives = 40/83 (48%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
+R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ + E
Sbjct: 228 ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYR 286
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
F + HH+FT
Sbjct: 287 WVVAAAISLAVLSFGLWVHHMFT 309
Score = 37.9 bits (84), Expect = 0.18
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +1
Query: 277 AYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVGGLTGGILA-N 450
A F++A+ ++AVPT +++F + T+ GT P ++ L F F +GGLTG ++A
Sbjct: 318 ALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVV 376
Query: 451 SSHWVLHYT 477
W +H T
Sbjct: 377 PFDWQVHDT 385
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF 76
TDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 194 TDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 57.6 bits (133), Expect = 2e-07
Identities = 33/83 (39%), Positives = 41/83 (49%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 184
DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II +K F
Sbjct: 275 DRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYA 333
Query: 185 XXXXXXXXXXXXXFIV*AHHIFT 253
+ V HH FT
Sbjct: 334 TMVIATFAIGGISWGVWLHHFFT 356
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/80 (35%), Positives = 49/80 (61%)
Frame = +1
Query: 208 NWVIRIHCLSSSYIH*GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 387
+W + +H + GI+I +F++AT+++ +PTG+K+F T+ ++ + P +L
Sbjct: 346 SWGVWLHHFFTMGAGPGINI----FFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPML 401
Query: 388 *RLGFVFLFTVGGLTGGILA 447
LG +FL VGGLTG +LA
Sbjct: 402 WALGALFLLLVGGLTGMMLA 421
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RLGFVFLFTVGGLT 432
G++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ LFT+GG T
Sbjct: 9 GLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGGTT 68
Query: 433 GGILANS 453
G ++ N+
Sbjct: 69 GVVMGNA 75
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 57.2 bits (132), Expect = 3e-07
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF 76
TDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 211 TDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
G+D+DTR YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG
Sbjct: 53 GLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTG 111
Query: 436 GILANS 453
+LANS
Sbjct: 112 LVLANS 117
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 115
DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 213 DRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 55.6 bits (128), Expect = 8e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFG 88
DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 213 DRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 55.2 bits (127), Expect = 1e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 148
D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 212 DKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +1
Query: 295 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGILANSSHWVLHY 474
T++I++P G+ + + T++G I++ +L LGF+FLF +GGLTG LA S +H
Sbjct: 309 TVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVS-LTVHL 367
Query: 475 TGTFY 489
+ T+Y
Sbjct: 368 SETYY 372
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/79 (35%), Positives = 38/79 (48%)
Frame = +2
Query: 14 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 193
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMV 291
Query: 194 XXXXXXXXXXFIV*AHHIF 250
IV HH+F
Sbjct: 292 YSMLAIVLVSCIVWLHHMF 310
Score = 48.8 bits (111), Expect = 9e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
F +T+I+AVPTG+KIF + T+ G +I +GF+F F +GG+TG
Sbjct: 322 FMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITG 372
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 52.8 bits (121), Expect = 6e-06
Identities = 23/39 (58%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 115
DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 230 DRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/26 (84%), Positives = 26/26 (100%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIF 333
G+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 5 GMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLFTVGGLT 432
G D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLFT+GG
Sbjct: 36 GFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFTMGGRQ 95
Query: 433 G 435
G
Sbjct: 96 G 96
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 265 IDTRAYFTSATIIIAVPTGIKIFR*LAT 348
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 49.2 bits (112), Expect = 7e-05
Identities = 24/57 (42%), Positives = 28/57 (49%)
Frame = +2
Query: 80 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIF 250
FFGHPEVY+LILP FGI+SHI F +V AHH+F
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMF 57
Score = 38.7 bits (86), Expect = 0.10
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 256 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 357
G D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 60 GYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 49.2 bits (112), Expect = 7e-05
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +1
Query: 142 YFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSYIH*GIDIDTRAYFTSATIIIAVPTG 321
Y K FW +CY N + G+D++T +F+S T+II VPTG
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNMCMGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTG 80
Query: 322 IKIFR*LATIHGTQINYNPNIL 387
IK+F L + +++N IL
Sbjct: 81 IKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 67 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSY 246
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 247 IH 252
+H
Sbjct: 61 VH 62
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 45.6 bits (103), Expect = 9e-04
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +2
Query: 5 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 130
DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 230 DRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 45.6 bits (103), Expect = 9e-04
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +2
Query: 32 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXX 211
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLV 301
Query: 212 XXXXFIV*AHHIF 250
F+V HH+F
Sbjct: 302 ALQSFVVWMHHMF 314
Score = 39.9 bits (89), Expect = 0.044
Identities = 25/104 (24%), Positives = 52/104 (50%)
Frame = +1
Query: 133 FSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSYIH*GIDIDTRAYFTSATIIIAV 312
F + R+ R +++ L ++V+ +H + + GI++ + F + TI I++
Sbjct: 280 FQTFTGRRLVGRKWFIISMVLVALQSFVVWMHHMFLT----GINLPIKTIFMATTIGISL 335
Query: 313 PTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGGIL 444
P + +F + T+ ++ + L LG + LF +GG+TG L
Sbjct: 336 PFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITGVFL 379
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -3
Query: 75 NKC*YKIGSPPPAGSKNDVFKFRSV 1
NKC + IGSPPPAGSK +VFKFRSV
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSV 24
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 42.7 bits (96), Expect = 0.006
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +2
Query: 47 GDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 148
G +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 255 GGALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 40.7 bits (91), Expect = 0.025
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +3
Query: 330 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRGNFSQFFPLGITLHWYLL 488
F MT Y +W++N L P + FC FI+ N G+FSQF + WYLL
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYST-WYLL 75
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 40.7 bits (91), Expect = 0.025
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 2 TDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 115
+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 44 SDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 37.9 bits (84), Expect = 0.18
Identities = 25/79 (31%), Positives = 30/79 (37%)
Frame = +2
Query: 23 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 202
S F G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGL 369
Query: 203 XXXXXXXFIV*AHHIFTEV 259
+ HH FT V
Sbjct: 370 VGVSMSGAMSGVHHYFTAV 388
Score = 33.1 bits (72), Expect = 5.0
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 283 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 435
F + T +++PTG + TI G ++ N +L L + F +GGLTG
Sbjct: 396 FMTITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTG 446
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 36.7 bits (81), Expect = 0.41
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +1
Query: 1 NRSKLKYIIF*SCWRRRPNFISTFILIFWT 90
N K KY IF W P +STFILIFWT
Sbjct: 123 NWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 0.94
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 44 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 160
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 35.5 bits (78), Expect = 0.94
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 1 NRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWL 180
N SKL++I+ S PN I ILI T L+ N T I ++ +K N
Sbjct: 115 NSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRITHLHNIFSQKSNILY 174
Query: 181 FRNNLCYTSNW 213
++NNL ++ W
Sbjct: 175 YKNNLRHSIYW 185
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 92 PEVYILILPGFGIISHIISQERGKK 166
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 50 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 163
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -1
Query: 359 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIP 255
VP + +H K LIPVGT +I+V E+K V S P
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSP 85
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 56 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 163
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 33.1 bits (72), Expect = 5.0
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 43 RRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIR 222
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 223 IHCLSSS 243
+ LSS+
Sbjct: 94 CNVLSSN 100
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 33.1 bits (72), Expect = 5.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSS 243
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 244 YIH 252
+H
Sbjct: 618 NVH 620
>UniRef50_Q7VG68 Cluster: Putative uncharacterized protein; n=2;
Helicobacter hepaticus|Rep: Putative uncharacterized
protein - Helicobacter hepaticus
Length = 239
Score = 32.3 bits (70), Expect = 8.7
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 112 FTRIWYNFSYYFTRKRKKRNFWL-FRNNLCYTSNWVIRIHCLSSSYIH 252
F ++WY +Y K + F++ + ++ YT +WVIRI+ +++ Y H
Sbjct: 127 FLKLWYQHRFY---KYGEFGFYVNWVSSAIYTGSWVIRINDINTQYRH 171
>UniRef50_Q74DA6 Cluster: Sodium/bile acid symporter family protein;
n=9; Bacteria|Rep: Sodium/bile acid symporter family
protein - Geobacter sulfurreducens
Length = 331
Score = 32.3 bits (70), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 439 ILANSSHWVLHYTGTFYG*APIPICP 516
I S+ W + +TGT +G AP P CP
Sbjct: 301 IQVQSAAWYVKFTGTLFGEAPAPSCP 326
>UniRef50_A7IFN8 Cluster: Putative uncharacterized protein
precursor; n=1; Xanthobacter autotrophicus Py2|Rep:
Putative uncharacterized protein precursor -
Xanthobacter sp. (strain Py2)
Length = 310
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 456 PLGITLHWYLLWVGA-HSHMPSQGGAVFAIMG 548
P+G+ + YLLW GA H Q GAV A MG
Sbjct: 194 PVGVLVGLYLLWAGADHPGGAFQSGAVLAAMG 225
>UniRef50_Q8I2P3 Cluster: Putative uncharacterized protein PFI1305w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI1305w - Plasmodium falciparum
(isolate 3D7)
Length = 1327
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 112 FTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSYI 249
F IW ++ + KK +W N++ YTS W I YI
Sbjct: 1045 FNIIWIKIKTWYKKIDKKEKYWKRYNDILYTSQWKNNIQDNELEYI 1090
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,956,363
Number of Sequences: 1657284
Number of extensions: 10605159
Number of successful extensions: 22650
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 21971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22602
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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