Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30415
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   3.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.2  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   4.2  

>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +1

Query: 82  FWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNN 192
           F+ S    + F R+  NF+Y++T+    ++ ++F N+
Sbjct: 649 FYDSLPFGYPFDRV-INFNYFYTKNMYFKDVFIFHND 684


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 131  LYQILVKLKYKLQDVQKIKINVD 63
            L +IL +L+ +LQ+VQK+  N D
Sbjct: 1102 LNEILRELEARLQEVQKLLDNAD 1124


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 527 RSICNYGGGLLTGSPL 574
           R++ + GG ++TGSP+
Sbjct: 330 RNVASVGGNIMTGSPI 345


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,414
Number of Sequences: 2352
Number of extensions: 11172
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)