Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30415
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.8  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    21   9.0  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    21   9.0  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/23 (26%), Positives = 10/23 (43%)
 Frame = -2

Query: 520 WEGIWEWAPTHKRYQCNVIPNGK 452
           W   W+W    K+Y  +    G+
Sbjct: 169 WGSAWQWNEERKQYYLHQFATGQ 191


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 393 IRFCIFIHSRRINRGNFSQFFPL 461
           + FC  IH+ ++N+ +    +P+
Sbjct: 570 LSFCEMIHNAQVNKRSIHNNYPV 592


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 479 VPFMGRRPFP 508
           VP  GRRPFP
Sbjct: 26  VPQPGRRPFP 35


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 479 VPFMGRRPFP 508
           VP  GRRPFP
Sbjct: 12  VPQPGRRPFP 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,376
Number of Sequences: 438
Number of extensions: 3206
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)