Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30414
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    94   6e-21
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    29   0.24 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   5.2  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 93.9 bits (223), Expect = 6e-21
 Identities = 46/79 (58%), Positives = 57/79 (72%)
 Frame = +2

Query: 17   SAAGVDYAGPVSCASRTGRGCRLIKSYIAIFVCFTTKAVHLELVGNLTSNNYLLALRRFI 196
            S +GVDYAGP+     T R     K YI+IFVCF TKAVH+ELV NLTS+ +L ALRRF+
Sbjct: 1423 SISGVDYAGPIMVKG-THRRAVPTKGYISIFVCFVTKAVHIELVSNLTSSAFLAALRRFV 1481

Query: 197  SRRGKPRDIFSDNGTSFVG 253
            +RRG   ++ SDNGT+F G
Sbjct: 1482 ARRGHVTELHSDNGTNFRG 1500



 Score = 83.0 bits (196), Expect = 1e-17
 Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
 Frame = +1

Query: 253  RYNDLSKFLKANC--DSLAADSAHDNINFHFIPAYSPNFGGLWEAGVKSTKHHLNRVLGN 426
            +  +L K L ++   D +    A  ++ + F P  +P+FGGLWEA VKS K HL RVLG 
Sbjct: 1504 KLRELYKLLNSDTHQDEVVGWCAERDMKWKFTPPAAPHFGGLWEAAVKSMKFHLKRVLGT 1563

Query: 427  CNLTFEELTTALVQIEAILNSRPLTPL 507
             +LTFE+L+T L +IEA LNSRP+T +
Sbjct: 1564 GHLTFEDLSTLLAEIEACLNSRPITAI 1590



 Score = 82.6 bits (195), Expect = 1e-17
 Identities = 34/84 (40%), Positives = 54/84 (64%)
 Frame = +3

Query: 513  DPEDLTPLTPGHFLIGRPLTSLPERNFQEHPITRLTRYQRIEQIRQHFWTRWCKEYVAQL 692
            DP D+  LTPGHFL+G  L ++ + +  + P  RL  ++ I++  QH W RW +EY++ L
Sbjct: 1593 DPNDMEALTPGHFLVGNHLQTVADVDIADVPTNRLNHWRLIQKHMQHIWNRWHREYLSTL 1652

Query: 693  QQRIKWRSCQYSLKIGTLVLLKEE 764
            Q+R KW     S++ G LV+L+E+
Sbjct: 1653 QKRAKWNKNAISIEPGRLVILQED 1676



 Score = 25.0 bits (52), Expect = 3.0
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 764  NLSPMKWKLGPIVEVNLGTDQLTRV 838
            N++  KW +  +V+++ G D +TRV
Sbjct: 1677 NVAVSKWPMARVVDLHPGKDGVTRV 1701


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 564 PLTSLPERNFQEHPITRLTRYQRIEQ 641
           P+T LP RN Q   I R   YQ++E+
Sbjct: 310 PITQLPYRNMQAFKILREAYYQQLEE 335


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
 Frame = +2

Query: 674 GIRGPTPAAYK-----MAIMSVFPENWHPSP 751
           G+R P P  ++     + +  +  E WHPSP
Sbjct: 510 GVRPPIPQRWQDEDILVVLSKIMQECWHPSP 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 908,406
Number of Sequences: 2352
Number of extensions: 19418
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)