Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30413
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0904 + 20717005-20718087 38 0.012
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 37 0.020
08_01_0305 - 2555227-2555635,2555785-2556254 31 1.3
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 31 1.3
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 30 1.8
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 30 2.3
04_04_1695 + 35433975-35437040 30 2.3
12_02_0372 + 18212948-18213821,18213887-18214030,18214128-182142... 29 4.1
09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094 29 4.1
03_01_0432 + 3339235-3339915,3340313-3340561,3341071-3341139,334... 29 4.1
02_03_0074 + 14781763-14784191,14784888-14784978,14785180-147852... 29 4.1
01_01_1192 + 9511961-9512977,9513860-9514078 29 4.1
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 29 5.4
09_06_0195 - 21477817-21478119,21478216-21478366,21478459-214786... 29 5.4
09_02_0146 + 4953007-4953297,4954105-4954341,4954592-4954669,495... 29 5.4
05_01_0192 + 1394342-1396645 29 5.4
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 29 5.4
10_01_0180 - 2037656-2037858,2038517-2038579,2038909-2039782 28 7.1
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 28 7.1
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 7.1
02_02_0587 + 11875678-11877234,11877606-11877608,11877755-118778... 28 7.1
01_06_0609 + 30583191-30583229,30583799-30583907,30584377-30585518 28 7.1
01_06_0583 + 30400317-30401681 28 7.1
01_01_0256 - 2083973-2084816,2084922-2086093 28 7.1
01_01_0050 - 382451-382864,382950-383020,383131-383176,383302-38... 28 7.1
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 28 9.4
12_01_0556 - 4514686-4514868,4515168-4515290,4515381-4515617,451... 28 9.4
11_01_0667 + 5436764-5437384,5437684-5437923,5438037-5438159,543... 28 9.4
10_01_0270 - 2876907-2877547,2877838-2878012 28 9.4
02_02_0404 + 9876703-9877314,9877599-9877838,9877951-9878073,987... 28 9.4
>04_03_0904 + 20717005-20718087
Length = 360
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 255 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYST-PEPQNDFYDITTTSQPKPPIIFN 431
P + +P P T +P+ + TPT ++ Y P+P T T +P PP +
Sbjct: 247 PTYKPQPKPNPPPTYKPQPK---PTPTPYTPPTYKPQPKPTPTPTPYTPTPKPNPPPTYK 303
Query: 432 PFPQSSPSPVKLDP 473
P P+ +P+P P
Sbjct: 304 PQPKPTPTPTPYKP 317
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = +3
Query: 276 EPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 455
+P KP E Y PT + TP+P Y T +P PP P +P+
Sbjct: 60 KPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPY----TPKPTPPAHTPTPPTYTPT 115
Query: 456 PVKLDPIRPT 485
P P PT
Sbjct: 116 PTPPKPTPPT 125
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 533 PINKPQPARIQPLSNRPQRPIFRPETKP 616
P KPQP P + +P P ++P+ KP
Sbjct: 228 PTYKPQPKPNPPPTYKPAPPTYKPQPKP 255
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +3
Query: 237 RGCLTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP 416
+G L + P P+T P TPTA S SG +TP+ + T
Sbjct: 158 QGSLAMSSPSPSPTPPSPLTPAPATTAPAPTPTAKSKSGQNTPKHKEALKPPATPVATAI 217
Query: 417 PIIFNPFPQSSPSPVKL 467
I FNP ++ SP+++
Sbjct: 218 AIPFNPAEEAMTSPLRI 234
>08_01_0305 - 2555227-2555635,2555785-2556254
Length = 292
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = -1
Query: 518 G*KGG*RRSVLRGTDGI*LDRARRRLWERVKDYGWFWLRSGGDVVEVILRFGCRVAAG 345
G +G RR RG DG R RRR W WL G V ++ +G AG
Sbjct: 86 GDRGAARRCEARGEDGATRRRLRRRWHTAGGGVWWRWLGMHGGRVVAVVEWGNGAEAG 143
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 330 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDP 473
P + S+ GY TP P I+T S P P++ P P SS +P+ DP
Sbjct: 531 PPSPSTGGY-TPTPD---VPISTPSSPYSPLV--PTPPSSTTPMPFDP 572
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 393 TTTSQPKPPIIFNPFPQSSPS-PVKLDPIRPTQY 491
T +S P PP+ + P P SPS P + P+ P Y
Sbjct: 400 TYSSPPPPPLYYPPPPDISPSPPPSVTPLPPVVY 433
>12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 256 QIFSHLMNLRNLLLKNQKMNTKLTLLQLFRPAATLHPNLKMTSTTSPPLLSQ 411
Q++ ++N+ + ++ N +Q + P +T P+ TSTTSP L +
Sbjct: 870 QVYGDIVNITRIFCSIKRCN-----IQKYPPTSTTRPSFPPTSTTSPSFLGR 916
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P E+P+ P + + P P+++ TT +PP +F P +P+P
Sbjct: 154 PQSVSAEQPDSRPPPAFPHGEAQAQAQPPPPESESKG-KTTHDHEPPRVFRSVPVQAPAP 212
Query: 459 VKLDPIRPT 485
P R T
Sbjct: 213 AASQPRRAT 221
>12_02_0372 +
18212948-18213821,18213887-18214030,18214128-18214273,
18214854-18214862
Length = 390
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +2
Query: 470 SHPSHAIQTVFTHPFNPIRNEPINKPQPARIQPLSNRPQRPIF--RPETKPFVXXXXXIQ 643
SHP+ + P +P + P ++P P + Q S P RPI P KP Q
Sbjct: 34 SHPTISRSVPVVQPSSP--SSPTSEPPPPQQQLTSTAPPRPIVISEPVRKPTQPHPRPKQ 91
Query: 644 PVRQYTRLRSQSAPPLETH 700
P + S S P + H
Sbjct: 92 PTKPPP---SSSTQPQQRH 107
>09_06_0282 - 22017474-22017484,22017681-22018473,22018918-22019094
Length = 326
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 297 EEPEDEYEINTPTAFSSSGYSTPEPQNDFYD 389
EE ED+ + P + GY P P DF D
Sbjct: 18 EEEEDDERVEVPKSGGVYGYDVPFPNMDFLD 48
>03_01_0432 +
3339235-3339915,3340313-3340561,3341071-3341139,
3341292-3341414,3341526-3341738
Length = 444
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 505 GEDGLYCVGRMGSSLTGLGED 443
G +GLYCVG G L G G D
Sbjct: 399 GPNGLYCVGFSGRGLLGAGAD 419
>02_03_0074 +
14781763-14784191,14784888-14784978,14785180-14785230,
14785882-14785947,14786509-14786610
Length = 912
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +2
Query: 389 HHHHFSAKTTHNL*PVPTIFS*PCQARSHPSHAI----QTVFTHPFNPIRNEPINKPQPA 556
HHHH ++ H++ P T + SH H + TV++ P + P +PQ A
Sbjct: 172 HHHHSGSRKRHSMPPAYT----AAEPVSHHHHLVVVDPSTVYSPPLPALPPPPPQQPQSA 227
Query: 557 RI 562
+
Sbjct: 228 LV 229
>01_01_1192 + 9511961-9512977,9513860-9514078
Length = 411
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 505 GEDGLYCVGRMGSSLTGLGED 443
GE+GLYC G + + G GED
Sbjct: 361 GENGLYCAGMVRRGIYGSGED 381
>09_06_0198 -
21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = -2
Query: 685 GRGLAPESCVLSDGLDFFFLFYKRLSFRPEYRSLRSIGKWLNSGRLRFVNWFVSDR 518
G+ L+P + V+SDG F F+ + PE L G W N R V W V+DR
Sbjct: 62 GKPLSPGATVVSDGGAFALGFFSPSNSTPEKMYL---GIWYNDIPRRTVVW-VADR 113
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 685 GRGLAPESCVLSDGLDFFFLFYKRLSFRPEYRSLRSIGKWLNSGRLRFVNWFVSDR 518
G+ L+P + ++SDG F F+ + PE L G W N R V W V+DR
Sbjct: 1762 GKPLSPGATLVSDGGAFALSFFSPSTATPEKMYL---GIWYNDIPQRTVVW-VADR 1813
>09_06_0195 -
21477817-21478119,21478216-21478366,21478459-21478696,
21478786-21478996,21479162-21479361,21479453-21479545,
21479722-21481093
Length = 855
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -2
Query: 685 GRGLAPESCVLSDGLDFFFLFYKRLSFRPEYRSLRSIGKWLNSGRLRFVNWFVSDRVERV 506
G+ L+P + V+SDG DF F+ + P + +G W N+ R V W V++R +
Sbjct: 31 GKPLSPGAAVISDGGDFALGFFAPSNSTP---AKLHLGIWYNNIPRRTVVW-VANRATPI 86
Query: 505 GEDG 494
+G
Sbjct: 87 IVNG 90
>09_02_0146 +
4953007-4953297,4954105-4954341,4954592-4954669,
4954991-4955167,4955705-4955761,4955988-4956174,
4956910-4957055,4957213-4957395,4957860-4957970,
4959386-4959505,4959596-4959740,4960001-4960164,
4960816-4960902,4961062-4961390,4963426-4963507,
4963616-4963746,4963976-4964225,4965112-4965393,
4966780-4966986
Length = 1087
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 246 LTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPII 425
+TS +Q PA P EP + E PTAF +PE + F +T + P+P I
Sbjct: 437 VTSKMVQIPAGPA-PKQVEPGSQTEQPPPTAFL---LLSPEEMSGFRFMTISVAPRPTIS 492
Query: 426 FNPFPQSS 449
P P +S
Sbjct: 493 GRPPPAAS 500
>05_01_0192 + 1394342-1396645
Length = 767
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 315 YEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 485
+ +TPT+ SSS S P P+ + T S P P P ++P P L+P+ P+
Sbjct: 242 WTFSTPTS-SSSSPSKPSPR-----MATPSSPPPEA---PVSSAAPPPASLNPMLPS 289
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 318 EINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 485
+I A ++G STP + + P PP +P Q SP P++ P +PT
Sbjct: 455 DIILSAAVPAAGSSTPS-SSQAMTTAAPAPPSPPEPPSPRHQPSPPPLRSPPRQPT 509
>10_01_0180 - 2037656-2037858,2038517-2038579,2038909-2039782
Length = 379
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 225 RSGKSWSSYSRN*TRHRCYPSLPEAALPDWSSDRNG-SWYL*SRW 94
+SG S S + T H C P+ P + P S RNG S +L + W
Sbjct: 301 QSGIEMSVISDHETIHECPPTCPHGSKPFLKSLRNGTSLHLVANW 345
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 318 EINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 485
+I A ++G STP + + P PP +P SSP P++ P +PT
Sbjct: 385 DIILSAAVPAAGSSTPS-SSQAMTAAAPAPPSPPEPPSPRHPSSPPPLRSPPRQPT 439
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Frame = +3
Query: 270 LDEPAKPVTEE-----PEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNP 434
LD P P E P D P S +TP P P PP+ P
Sbjct: 1134 LDAPPPPPLPEGPPPLPSDSPPCQPPLP-PSPPPATPPPPPPLSPSLPPPPPPPPLPSGP 1192
Query: 435 FPQSSPSPVKLDP 473
PQ +P P+ + P
Sbjct: 1193 PPQPAPPPLPIQP 1205
>02_02_0587 +
11875678-11877234,11877606-11877608,11877755-11877823,
11878605-11878719,11879139-11879248
Length = 617
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 206 LLTLGIEPGTGAILPCLKPPCLTGPP 129
+L+ GI P TG I ++P C GPP
Sbjct: 380 MLSRGILPSTGMITLFIEPLCTFGPP 405
>01_06_0609 + 30583191-30583229,30583799-30583907,30584377-30585518
Length = 429
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -1
Query: 260 IWRGEASTDLKDGLANPGLLTLGIEPGTGAILPCLKPPCLTGPPTGMAPGICSLGGIG 87
+ +G ++K G PG T+G+ G G + +KP G P G + G+ GG+G
Sbjct: 78 VGKGGVGVNVKPGYGKPGGTTVGV--GKGGVGVNVKPG--YGKPGGTSVGV-GKGGVG 130
>01_06_0583 + 30400317-30401681
Length = 454
Score = 28.3 bits (60), Expect = 7.1
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +1
Query: 223 PSFKSVDASPRQIFSHLMNLRNLL----LKNQKMNTKLTLLQLFRPAATLH-PNLKMTST 387
PS K A P +FS L +L++L KN NT L L PAA L +L+ S
Sbjct: 84 PSCKDTAAFPPLVFSSLPHLQSLFFVGCFKNPAANTSLVL----PPAANLSTSSLQQLSI 139
Query: 388 TSPPLLSQNHP*SLTRSHNL 447
+ P LS P L +L
Sbjct: 140 RANPSLSGVMPPQLATLRSL 159
>01_01_0256 - 2083973-2084816,2084922-2086093
Length = 671
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +1
Query: 94 PPRLQIPGAIPVGGPVRQGGFRQGRIAPVPGSI----PRVRRPGFARPSFKSVDASPRQI 261
PP ++ +PV Q G + PV G P+V P A PS DAS R +
Sbjct: 300 PPDSRLAPQVPVEDHFAQMGISDQPVQPVIGGYMQPPPQVPIPNMAVPSISPSDASSR-V 358
Query: 262 FS 267
FS
Sbjct: 359 FS 360
>01_01_0050 -
382451-382864,382950-383020,383131-383176,383302-383333,
383409-383558,383666-383849,383934-384109,384580-384628,
384724-384923,385515-385548
Length = 451
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +2
Query: 506 HPFNPIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRLRSQSAP 685
HPF P+ EP PAR R QRP + + + P+ Y AP
Sbjct: 293 HPFMPVPGEPSPGAFPARSYVEQQRMQRPGYGFQPQMSNDRWNPGSPLTNY-----HGAP 347
Query: 686 PLETHNRNTAQLIPE 730
P + ++ + I E
Sbjct: 348 PYQQYHHGSTNAIDE 362
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 318 EINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 485
+I A ++G STP + T + P PP +P SP P++ P +PT
Sbjct: 542 DIILSAAVLAAGSSTPS-SSQAMTATAPAPPSPPEPPSPQHPPSPPPLRSPPRQPT 596
>12_01_0556 -
4514686-4514868,4515168-4515290,4515381-4515617,
4515747-4516358
Length = 384
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 505 GEDGLYCVGRMGSSLTGLGEDCGN 434
G +GLYCVG L+G+ D N
Sbjct: 346 GSNGLYCVGFARRGLSGIAHDAKN 369
>11_01_0667 +
5436764-5437384,5437684-5437923,5438037-5438159,
5438301-5438480
Length = 387
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = -2
Query: 622 YKRLSFRPEYRSLRSIGKWLNSGRLRFVN-WFVSDRVERV--GEDGLYCVGRMGSSLTGL 452
+ + F Y+S ++ WL +G F + F + GE+GLYC G L G+
Sbjct: 310 FDAIVFATGYKS--TVNAWLKNGESMFKDDGFPKNYFPNHWRGENGLYCAGFARRGLAGI 367
Query: 451 GEDCGN 434
D N
Sbjct: 368 AMDAKN 373
>10_01_0270 - 2876907-2877547,2877838-2878012
Length = 271
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 431 PVPTIFS*PCQARSHPSHAIQTVFTHPFNPIRNEPINKPQPA 556
P P ++S P A SHP+ + P PI + P + + A
Sbjct: 191 PAPPVYSYPTPAYSHPTPVYKQPLPTPSPPIYHPPAEEKKVA 232
>02_02_0404 +
9876703-9877314,9877599-9877838,9877951-9878073,
9878195-9878374
Length = 384
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 622 YKRLSFRPEYRSLRSIGKWLNSGRLRFVN-WFVSDRVERV--GEDGLYCVGRMGSSLTGL 452
+ + F Y+S ++ WL +G F N F + GE+GLYC G L +
Sbjct: 307 FDAIVFATGYKS--TVNTWLKNGESMFRNDGFPKKKFPNHWRGENGLYCAGFARRGLVSI 364
Query: 451 GEDCGN 434
D N
Sbjct: 365 AMDAKN 370
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,967,159
Number of Sequences: 37544
Number of extensions: 536078
Number of successful extensions: 2092
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2076
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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