Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30413
(764 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.055
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 33 0.25
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8) 32 0.58
SB_738| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_49278| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_36777| Best HMM Match : VWA (HMM E-Value=0) 30 1.8
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.3
SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 29 3.1
SB_1002| Best HMM Match : OTCace_N (HMM E-Value=0) 29 3.1
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 3.1
SB_31237| Best HMM Match : Cathelicidins (HMM E-Value=0.58) 29 3.1
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 3.1
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 4.1
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 5.4
SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27) 29 5.4
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 29 5.4
SB_22052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 28 7.2
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 28 7.2
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 28 7.2
SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 7.2
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 7.2
SB_3069| Best HMM Match : zf-C2H2 (HMM E-Value=1e-06) 28 7.2
SB_18557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_15358| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.03) 28 7.2
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 28 9.5
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 28 9.5
SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12) 28 9.5
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_47096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_36903| Best HMM Match : p450 (HMM E-Value=0) 28 9.5
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 31.5 bits (68), Expect(2) = 0.055
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 85 SPIPPRLQIPGAIPVGGPVRQG---GFRQGRIAPVPGSIPRVRRPGFARPSFKSVDASPR 255
S PPR +P P+GGPVR G + PVP + RP P+ S + R
Sbjct: 336 SASPPRHTLPRPEPIGGPVRGSEPKGVARADAPPVPARTDQTPRPERPVPAGASPQSRRR 395
Query: 256 Q 258
+
Sbjct: 396 R 396
Score = 22.6 bits (46), Expect(2) = 0.055
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 343 RPAATLHPNLKMTSTTSPPLLSQNHP 420
RP T P + TTS PLL N P
Sbjct: 396 RPVPT--PRRTVHKTTSSPLLDPNQP 419
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +3
Query: 264 QSLDEPAKPVTEEPE---DEYEINT-PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 431
QSL E +K E E + +E++ P + +SS S PEP + P PP
Sbjct: 561 QSLGEASKHFEENDEVVVESFEVSLKPASATSSSRSPPEPFELRKALPKHESPSPPSRVP 620
Query: 432 PFPQSSPSP 458
P P+++P P
Sbjct: 621 PQPETAPKP 629
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 112 PGAIPVGGPVRQGGFRQGRIAP-VPGSIPRVRRPG 213
PG IP P R+ G R G I P VPG I RRPG
Sbjct: 517 PGGIPGRTPGRRPGGRPGNIPPFVPGLIIPSRRPG 551
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 321 INTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFP-QSSPSPVKLDPIRPTQ 488
+ TPT ++ +TP P T ++P P + P Q++P+P P PTQ
Sbjct: 10 LTTPTLTKATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQ 66
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +3
Query: 261 LQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFP 440
LQ + P P++ P PT ++ +S P P Y QP+PP I P P
Sbjct: 904 LQPYNTPMPPISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY------QPQPPGIMQP-P 956
Query: 441 QSSPSPVKLDP 473
S P + P
Sbjct: 957 TSIPPSQPMAP 967
>SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8)
Length = 355
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYD---ITTTSQPKPPIIFNPFPQSS 449
PA P T P + I P+ ++ G TP P F TT++P P + P P+
Sbjct: 226 PATPAT--PANGVPIAGPSGMATPGAFTPPPAPVFTPPPPYRTTAKPFPKMSLTPTPKKP 283
Query: 450 PSPVK 464
P P K
Sbjct: 284 PVPKK 288
>SB_738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 497 VFTHPFNPIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFV 622
+ + P NPI + P N P+ + P PI P T P +
Sbjct: 8 IMSPPTNPIMSPPTNPIMSPPTSPIMSPPTNPIMSPPTNPIM 49
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 509 PFNPIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFV 622
P NPI + P N P+ + P PI P T P +
Sbjct: 4 PTNPIMSPPTNPIMSPPTNPIMSPPTSPIMSPPTNPIM 41
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 264 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQND-FYDITTTS 404
Q +++ K ++EPE E + +A + S PE D FYD+ TTS
Sbjct: 2122 QIVNKTPKQTSKEPEPEVSPKSESAEALKVTSAPEVTKDTFYDVNTTS 2169
>SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1104
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 237 RGCLTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPE-PQNDFYDITTTSQPK 413
RG L + S +E +P+T+ +TP A S SG PE P Y T Q K
Sbjct: 155 RGDLILKEIASDEEVERPITQRLHQPLAFSTP-ALSQSGLGNPETPDVSLYKTCETPQ-K 212
Query: 414 PPIIFNPFPQS 446
P N F S
Sbjct: 213 PLDKMNEFLHS 223
>SB_49278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 631 RRNPARQTVHKTQEPIRAPVRNTQQKYSPTNTR 729
RR+P+ T++ T + I+APV N Q SP N +
Sbjct: 485 RRSPSGITLNTTVQIIQAPVTNQQSLSSPVNNQ 517
>SB_36777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1303
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 378 DFYDITTTSQPKPPIIFNPFPQSSPSPVKLDP 473
D D S P P ++ NP PQ +P+P P
Sbjct: 1247 DICDNLQVSTPSPSLVPNPVPQPAPAPAPAPP 1278
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/77 (25%), Positives = 29/77 (37%)
Frame = +3
Query: 240 GCLTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPP 419
G T+P + + +P PE PT + P ++TTT P PP
Sbjct: 16 GATTAPPVLTEAATTQPPAPPPE-------PTQAPVADTDPPTNPPSVVEVTTTQAPPPP 68
Query: 420 IIFNPFPQSSPSPVKLD 470
+ P + P PV D
Sbjct: 69 PVVTEAPTTVPPPVVTD 85
>SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 828
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = +3
Query: 270 LDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 449
L EP KP EPE E P + S + EP+ F D S KPP P+
Sbjct: 487 LQEPIKP--PEPEPLKEAPPPVSISPA-----EPKVKFLDSVKISSYKPPEPNPVAPKEP 539
Query: 450 PSPV 461
P P+
Sbjct: 540 PKPI 543
>SB_1002| Best HMM Match : OTCace_N (HMM E-Value=0)
Length = 563
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Frame = +3
Query: 387 DITTTSQPKPPIIFNP-FPQS---SPSPVKLD---PIRPTQYR 494
D+ TTS P P +++ P P S PSP K D P PT +R
Sbjct: 88 DVRTTSPPTPMVVYGPHLPPSMPAPPSPRKADRGWPFPPTVHR 130
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 461 QARSHPSHAIQT-VFTHPFNPIRNEPINKPQPARIQPLSNRPQRP 592
QA P H +Q + HP P + + + P + QPL + PQ P
Sbjct: 1162 QAMGPPHHTMQQPLIHHPHEPHQVQAMGPPPHSMQQPLLHHPQDP 1206
>SB_31237| Best HMM Match : Cathelicidins (HMM E-Value=0.58)
Length = 562
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +3
Query: 234 IRGCLTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK 413
IR T N + PVT P +++ TPT+ S E + F +I + P
Sbjct: 59 IRDSTTQSNTSTATNELDPVTVSPVLTHQVMTPTSKERSVRKVWEKEKVFNEIVAMALPV 118
Query: 414 PPI 422
P +
Sbjct: 119 PNV 121
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYS-TPEPQNDFYDITTTSQPKPPIIFN 431
P + S + A P P NTP F+SSG+ P P DF P PP +
Sbjct: 269 PPIPSASQNATPPPPPPPPS---NTPGMFASSGFQPPPPPPTDF-----APPPPPPEPTS 320
Query: 432 PFPQSSPSP 458
P P P
Sbjct: 321 ELPPPPPPP 329
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 330 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPII 425
P + +SG S P+P D Y++T + P+P +
Sbjct: 1396 PGYYCTSGVSVPKPYIDTYNVTNGTCPEPSFL 1427
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 458 CQARSHPSHAIQTVFTHPFNPIRNEPINKPQPARIQPLSNRP 583
CQA+ Q + HP+ + P +K P LSN P
Sbjct: 433 CQAKDSICDGTQKKYPHPYENVLENPSSKTNPYENVELSNGP 474
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +3
Query: 234 IRGCLTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPE-PQNDFYDITTTSQP 410
+ C +P +P PVTE + E P + S TP P T+ P
Sbjct: 147 VEDCTGTPEPTITSKP--PVTETTTTKPETKPPKPPAPSTIPTPPTPPAPPSPPIPTAPP 204
Query: 411 KPPIIFNPFPQSSP--SPVKLDPIRP 482
PP+ P P SP P L P P
Sbjct: 205 TPPMPETPLPPGSPHIPPAPLHPHIP 230
>SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27)
Length = 592
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 246 LTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTP--EPQNDFYDI 392
+T+ +++ D+PAK PED +P EP ++FYDI
Sbjct: 97 MTALSVEPADKPAKKADNIPEDLQRCGKAAVLGKMSIVSPNSEPIDNFYDI 147
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Frame = +3
Query: 303 PEDEYEINTPTAFSSSGYSTPEP------QNDFYDITTTSQPKPPIIFNP--FPQSSPSP 458
P E NTP ++ Y+TP Q + +TT+QP P F P P P+P
Sbjct: 825 PAQTTEANTPPVQTTESYNTPTETTALPYQETSTESSTTAQPTQPPTFAPSIAPTQPPTP 884
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 288 PVTEEPEDEYEINTPTAFSSSGY--STPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV 461
P T P + IN P+++ + + P Q + +T P + FP S+P+P+
Sbjct: 249 PSTPAPINPTPIN-PSSYQPNSHPPQLPSTQLPSTQLPSTQLPSTQLPSTQFP-STPAPI 306
Query: 462 KLDPIRPT 485
PI PT
Sbjct: 307 NPTPINPT 314
>SB_22052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 290 RFRRFIK*LKIWRGEASTDLKDGLANPGLLTLGIEPGT--GAILPCLKPPCLTGPPTGMA 117
R RRFI K+ + + + ++ D L+ P L ++ + P T + PC + PP G
Sbjct: 40 RHRRFISLCKLEKSDCTPNINDVLSKPYLCSMELNPATIGQSSTPCNSNGTIP-PPIGAF 98
Query: 116 PG 111
G
Sbjct: 99 NG 100
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 285 KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK-PPIIFNPFPQSSPSP 458
+PV +P++ + ++ +S S+P PQ D + T + K P P SP P
Sbjct: 415 QPVQPKPQEVDSSSAGSSVQTSNDSSPAPQEDDKSSSATEEYKSEPSSAQPSANQSPEP 473
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 70 YAQNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVP--GSIPRVRRPGFARPSFKS 237
+A N SP R GA G P+ + R VP G IP ++RP F PSF S
Sbjct: 820 HAMNKSP--ERSPREGADRRGLPMTLSDLNRRREQGVPSEGPIPGLKRPDFLLPSFGS 875
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +3
Query: 297 EEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPI 476
EE E E+ +P+ TPE + T P NP P +P P P
Sbjct: 431 EEEETLEEVTSPSE-EQPAEPTPEEHVEPEPTLATGSSNPHHHGNPHPHGNPRPKPQLPQ 489
Query: 477 RPT 485
RPT
Sbjct: 490 RPT 492
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 106 QIPGAIPVGGPVRQGGFRQGRIAPVPGSIPRVRRPGFARPSFKSVDASP 252
++PGAI GG QGG QG PG P + + G P F P
Sbjct: 205 EMPGAIQPGGAPLQGGPPQGESHGQPGP-PALLQQGPPGPPFHGEPRPP 252
>SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 729
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 70 YAQNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVP--GSIPRVRRPGFARPSFKS 237
+A N SP R GA G P+ + R VP G IP ++RP F PSF S
Sbjct: 16 HAMNKSP--ERSPREGADRRGLPMTLSDLNRRREQGVPSEGPIPGLKRPDFLLPSFGS 71
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTP-EPQNDFYDITTT-SQP---KPPIIFNPF-P 440
P KP T P TPT + +TP +P TTT ++P PP P P
Sbjct: 75 PTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKP 134
Query: 441 QSSPSPVKLDPIRPT 485
++ P P +PT
Sbjct: 135 TTTTPPATTTPTKPT 149
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/65 (26%), Positives = 21/65 (32%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P KP T P PT + G +TP TT+ KP P + P
Sbjct: 103 PTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKP 162
Query: 459 VKLDP 473
P
Sbjct: 163 TTTTP 167
>SB_3069| Best HMM Match : zf-C2H2 (HMM E-Value=1e-06)
Length = 625
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 503 THPFNPIRNEPINKPQPARIQPLSNRPQRPIFRP 604
THP P + P+P +Q + +RP P + P
Sbjct: 450 THPLRHFPYPPDSYPEPVHMQTIHHRPYPPQYPP 483
>SB_18557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 246 LTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT 401
L+SP Q+ D + P+T+ E+ + T T +SS T N +T T
Sbjct: 85 LSSPLTQTWDNSSSPLTQTRENSSSLLTQTRDNSSSPLTQTQDNSSSPLTQT 136
>SB_15358| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.03)
Length = 435
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -1
Query: 212 PGLLTLGIEPGTGAILPCLKPPCLTGPPTGMAPGI 108
PGL G+ PG +LPCL P L G P G+ PG+
Sbjct: 189 PGLP--GVLPGLPGVLPCL-PGVLPGLP-GVLPGL 219
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = +2
Query: 392 HHHFSAKTTHNL*PVPTIFS*PCQARSHPSHAIQTVFTHPFNPIRNEPINKPQPARIQPL 571
H H A+ TH P + P R H T +TH + P P + P
Sbjct: 742 HPHLHAQYTHAYTPSTHTLTRPVNPRLH------TQYTHTYTPGTPTPTQREYTHAYTPS 795
Query: 572 SNRPQRPI 595
+ P RP+
Sbjct: 796 TPTPTRPV 803
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 240 GCLTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSG 353
GC + P L+ D P P+T +P + T +SG
Sbjct: 1005 GCASDPVLRPADLPTPPITAKPPGGPDTTTDPNMGASG 1042
>SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12)
Length = 1093
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 270 LDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDF 383
+DEP KP ++E +++Y +N P SS +N F
Sbjct: 589 IDEPVKPKSKEKKNKY-LNVPELGSSKSEKVMMEENTF 625
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 303 PEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV 461
PED+ E+++ +A +SS ST P N + S + P ++P P+
Sbjct: 30 PEDDLEVSSVSASASS--STSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPL 80
>SB_47096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 130 GGPVRQGGFRQGRIAP-VPGSIPRVRRPGFARPSFKS--VDASPRQIF 264
GGP + ++ + P GS+PR RRPG P K V P++I+
Sbjct: 239 GGPDSKAPSKKATVRPSTAGSVPRRRRPG-GNPRHKRDVVGVFPKRIY 285
>SB_36903| Best HMM Match : p450 (HMM E-Value=0)
Length = 644
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 333 TAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS 446
T F S+ T P + F+++T PKPP++ P P+S
Sbjct: 534 TLFGSTCAKTFNP-DIFWNVTFPKTPKPPVVPIPQPKS 570
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,610,223
Number of Sequences: 59808
Number of extensions: 580565
Number of successful extensions: 2076
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2057
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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