Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30413
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.27 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.84 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.84 
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   3.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.4  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   5.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   7.8  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   7.8  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = +3

Query: 237 RGCLTSPNLQSLDEPAKPVTE--EPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQP 410
           +G +     Q ++ PA P+ E     D+ E+N      S+  + PEP ++          
Sbjct: 20  KGSVVVMQPQPIERPATPMMELCYSSDDDELN------STIIAMPEPASECEAAEAAMDL 73

Query: 411 KPPIIFNPFPQSSPSP 458
           +PP    P P +SP P
Sbjct: 74  EPPAAAQPTPTASPVP 89


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 22/80 (27%), Positives = 29/80 (36%)
 Frame = +2

Query: 473 HPSHAIQTVFTHPFNPIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVR 652
           HP+H       HP          +P P+  QP+  +PQR         F        P R
Sbjct: 180 HPAH--HPALLHPAYHTGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSP-R 236

Query: 653 QYTRLRSQSAPPLETHNRNT 712
             +   S SA PL  H  +T
Sbjct: 237 LCSSNGSSSATPLPLHPYHT 256


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 22/80 (27%), Positives = 29/80 (36%)
 Frame = +2

Query: 473 HPSHAIQTVFTHPFNPIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVR 652
           HP+H       HP          +P P+  QP+  +PQR         F        P R
Sbjct: 180 HPAH--HPALLHPAYHTGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSP-R 236

Query: 653 QYTRLRSQSAPPLETHNRNT 712
             +   S SA PL  H  +T
Sbjct: 237 LCSSNGSSSATPLPLHPYHT 256


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 476 PSHAIQTVFTHPFNPIRNEPINKPQP 553
           P+  I T +T  + P  NEP + P P
Sbjct: 259 PTTTITTDYTTAYPPTTNEPPSTPHP 284


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 667 QEPIRAPVRNTQQKYSPTNTRE 732
           Q P ++P   +QQ  SP NT E
Sbjct: 445 QSPTQSPSPGSQQSLSPANTDE 466



 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -3

Query: 237 GFKRRSGKSWSSYSRN*TRHRCYPSLPEAALPDWSSDRN 121
           G  R   + W+S SR   +H    + P++  PD   D +
Sbjct: 536 GGGREGSQEWNSRSRPPQQHSMLRTGPKSLAPDHEGDND 574


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 200 TLGIEPGTGAILPCLKPPCLTGPPTGMAP 114
           T  + PGT    P    P  T PPT  AP
Sbjct: 417 TSTVAPGTTTTTPTGANPGTTQPPTSDAP 445


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = -1

Query: 434 RVKDYGWFWLRSGGDVVEVILRFGCRVAAGRKSCRSVNFVFIFWFFSNR 288
           R   +G    RSG   + +  R G  +  G +   +  F+F+  +F+ +
Sbjct: 383 RASSFGPMRRRSGSPTLHIHCRRGLTIETGARCSTAAFFLFLARWFAQQ 431


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 728 EKRNQSLKLFV 760
           EKRN SLKLFV
Sbjct: 64  EKRNDSLKLFV 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 824,873
Number of Sequences: 2352
Number of extensions: 17914
Number of successful extensions: 78
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)