Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30413
(764 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 38 0.010
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 35 0.052
At3g22070.1 68416.m02785 proline-rich family protein contains pr... 33 0.16
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 33 0.16
At4g34440.1 68417.m04894 protein kinase family protein contains ... 33 0.28
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 31 0.64
At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-contain... 31 0.64
At4g24150.1 68417.m03465 expressed protein ; expression supporte... 31 0.84
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 31 1.1
At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At3g20680.1 68416.m02617 expressed protein 30 1.5
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 30 1.5
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 30 1.5
At5g52740.1 68418.m06546 heavy-metal-associated domain-containin... 30 1.9
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.9
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 1.9
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.9
At5g43820.1 68418.m05358 pentatricopeptide (PPR) repeat-containi... 29 2.6
At5g38560.1 68418.m04662 protein kinase family protein contains ... 29 2.6
At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein lo... 29 2.6
At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein lo... 29 2.6
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 2.6
At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family... 29 2.6
At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat... 29 2.6
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 2.6
At5g12440.1 68418.m01462 zinc finger (CCCH-type) family protein ... 29 3.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 3.4
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 29 4.5
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 4.5
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 4.5
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 29 4.5
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 4.5
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 4.5
At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family... 29 4.5
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 4.5
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 28 5.9
At5g37060.1 68418.m04448 cation/hydrogen exchanger, putative (CH... 28 5.9
At5g18440.1 68418.m02172 hypothetical protein 28 5.9
At5g22760.1 68418.m02658 PHD finger family protein contains Pfam... 28 7.8
At3g30230.1 68416.m03820 myosin heavy chain-related similar to M... 28 7.8
At3g18890.1 68416.m02399 expressed protein similar to UV-B and o... 28 7.8
At2g24060.1 68415.m02874 translation initiation factor 3 (IF-3) ... 28 7.8
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +3
Query: 252 SPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 431
+P +QS P PV P + P + +P P +Y T S P PP+ +
Sbjct: 655 TPVIQS--PPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPPVYYL 712
Query: 432 PFPQS--SPSPVKLDPI 476
P QS PSPV P+
Sbjct: 713 PVTQSPPPPSPVYYPPV 729
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P PV P + P +S S P P +Y T S P P+ + P QS P P
Sbjct: 648 PPPPVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPP 707
Score = 34.3 bits (75), Expect = 0.090
Identities = 20/68 (29%), Positives = 26/68 (38%)
Frame = +3
Query: 255 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNP 434
P Q P P + PT ++ S P P +Y T S P PP+ + P
Sbjct: 599 PYYQYTSSPPPPTYYATQSPPPPPPPTYYAVQ--SPPPPPPVYYPPVTASPPPPPVYYTP 656
Query: 435 FPQSSPSP 458
QS P P
Sbjct: 657 VIQSPPPP 664
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS-SPS 455
P PV P P ++ S P P + +T + P PP+ + P QS PS
Sbjct: 634 PPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPS 693
Query: 456 PVKLDPI 476
PV P+
Sbjct: 694 PVYYPPV 700
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 252 SPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 431
SP QS P PV P + +P + S P P + +T + P P+ +
Sbjct: 669 SPVTQS-PPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYP 727
Query: 432 PFPQS--SPSPVKLDPI 476
P +S PSPV P+
Sbjct: 728 PVAKSPPPPSPVYYPPV 744
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/74 (24%), Positives = 27/74 (36%)
Frame = +3
Query: 255 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNP 434
P QS P T P + Y +P + Y++ P +Y + P PP +
Sbjct: 573 PTTQSPPPPKYEQTPSPREYYPSPSPPYYQ---YTSSPPPPTYYATQSPPPPPPPTYYAV 629
Query: 435 FPQSSPSPVKLDPI 476
P PV P+
Sbjct: 630 QSPPPPPPVYYPPV 643
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/57 (26%), Positives = 21/57 (36%)
Frame = +3
Query: 288 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P P +Y + P + S P P Y + P PP+ + P S P P
Sbjct: 594 PSPSPPYYQYTSSPPPPTYYATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTASPPPP 650
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/71 (26%), Positives = 25/71 (35%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P PV P + P + S P P +Y S P P ++ P SP P
Sbjct: 691 PPSPVYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYPPVAKSPPPPSPVYYPPVTQSPPP 750
Query: 459 VKLDPIRPTQY 491
P P +Y
Sbjct: 751 ----PSTPVEY 757
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +3
Query: 288 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP--PIIFNP--FPQSSPS 455
PVT+ P +P + S P P +Y T S P P P+ ++P P SP
Sbjct: 713 PVTQSPPPP----SPVYYPPVAKSPPPPSPVYYPPVTQSPPPPSTPVEYHPPASPNQSPP 768
Query: 456 PVKLDP 473
P P
Sbjct: 769 PEYQSP 774
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 35.1 bits (77), Expect = 0.052
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +3
Query: 288 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP-PIIFNPFPQS--SPSP 458
PVT P +P + YS P P +Y T S P P P+ + P S PSP
Sbjct: 577 PVTNSPPPP----SPVYYPPVTYSPPPPSPVYYPQVTPSPPPPSPLYYPPVTPSPPPPSP 632
Query: 459 VKLDPIRPT 485
V P+ P+
Sbjct: 633 VYYPPVTPS 641
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 288 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKL 467
PVT+ P + P +S P P +Y T S P P ++ +PQ +PSP
Sbjct: 562 PVTQSPPPPSPVYYPPVTNSP----PPPSPVYYPPVTYSPPPPSPVY--YPQVTPSPPPP 615
Query: 468 DPI 476
P+
Sbjct: 616 SPL 618
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 288 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP-PIIFNPFPQS--SPSP 458
PVT P +P + S P P +Y T S P P P+ + P S PSP
Sbjct: 592 PVTYSPPPP----SPVYYPQVTPSPPPPSPLYYPPVTPSPPPPSPVYYPPVTPSPPPPSP 647
Query: 459 VKLDPIRPT 485
V P+ P+
Sbjct: 648 VYYPPVTPS 656
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 288 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP-PIIFNPFPQS--SPSP 458
PVT+ P +P + S P P +Y T S P P P+ + P S PSP
Sbjct: 547 PVTQSPPPP----SPVYYPPVTQSPPPPSPVYYPPVTNSPPPPSPVYYPPVTYSPPPPSP 602
Query: 459 VKLDPIRPT 485
V + P+
Sbjct: 603 VYYPQVTPS 611
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Frame = +3
Query: 255 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQND-FYDITTTSQPKP-PIIF 428
P + S P P P E P + + +P P + +Y T S P P P+ +
Sbjct: 516 PYVYSSPPPPPPSPPPPCPESSPPPPVVYYAPVTQSPPPPSPVYYPPVTQSPPPPSPVYY 575
Query: 429 NPFPQS--SPSPVKLDPI 476
P S PSPV P+
Sbjct: 576 PPVTNSPPPPSPVYYPPV 593
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = +3
Query: 288 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVK 464
PVT P + P S P P + Y + T P PP + P SP P K
Sbjct: 637 PVTPSPPPPSPVYYPPVTPS-----PPPPSPVYYPSETQSPPPPTEYYYSPSQSPPPTK 690
>At3g22070.1 68416.m02785 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 178
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 357 STPEPQNDFY----DITTTSQPKPPIIFNPFPQSSPSPVKLDP 473
STP P +F D+ TT+ P PP P P P+PV P
Sbjct: 114 STPNPPPEFSPPPPDLDTTTAPPPPSTDIPIPPPPPAPVSASP 156
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +3
Query: 249 TSPNLQSLDEP-AKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPII 425
TSP + P P P +PT SSS +P P + P PP
Sbjct: 60 TSPFITPFPNPNPNPNPNPPVLGSSPPSPTDSSSSTSISPNPPAPIVN----PNPPPPST 115
Query: 426 FNPFPQSSPSPVKLD 470
NP P+ SP P LD
Sbjct: 116 PNPPPEFSPPPPDLD 130
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 273 DEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT--SQPKPP 419
DEP + E EY + TP SSGY T N+ ++T + SQP+ P
Sbjct: 147 DEPQSQILLEESSEYSLQTP---ESSGYKTSLQPNEKLEMTASQDSQPEQP 194
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 32.7 bits (71), Expect = 0.28
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Frame = +3
Query: 249 TSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 428
TSP+ +S P P + P P S+S P P T+ PP++
Sbjct: 24 TSPSNES--SPPTPPSSPPPSSISAPPPD-ISASFSPPPAPPTQETSPPTSPSSSPPVVA 80
Query: 429 NPFPQ-----SSPSPVKLDPIRP 482
NP PQ S P+P P+ P
Sbjct: 81 NPSPQTPENPSPPAPEGSTPVTP 103
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 31.5 bits (68), Expect = 0.64
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +3
Query: 249 TSPNLQSLDEPAKP-VTEEPEDEYEINTPTAFSSS--GYSTPEPQNDFYDIT--TTSQPK 413
+SP + P P V + P Y P +S YS P P D Y S P
Sbjct: 351 SSPPPYAYSPPPSPYVYKSPPYVYSSPPPYTYSPPPYAYSPPPPCPDVYKPPPYVYSSP- 409
Query: 414 PPIIFNPFPQSSPSP 458
PP ++NP P SSP P
Sbjct: 410 PPYVYNP-PPSSPPP 423
>At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF00169: Pleckstring homology
(PH) domain, PF01852: Lipid-binding START domain
Length = 733
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +3
Query: 243 CLTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI 422
CL+ N L AK V E E++ PT+ +S + ++F+D+ +P
Sbjct: 391 CLSKINTMPLKTEAKEVDLETMHAEEMDKPTSARNSLMDLNDASDEFFDV---PEPNEST 447
Query: 423 IFNPFPQSSP 452
F+ F SSP
Sbjct: 448 EFDSFIDSSP 457
>At4g24150.1 68417.m03465 expressed protein ; expression supported
by MPSS
Length = 493
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 336 AFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLD 470
AFS + + E Q + Y S P PP + PFP++ S D
Sbjct: 149 AFSEAQWHELERQRNIYKYMMASVPVPPELLTPFPKNHQSNTNPD 193
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 613 LSFRPEYRSLRSIGKWLNSGRLRFVNWFVSD 521
L FRP ++ S+G NS L V WF SD
Sbjct: 191 LGFRPSQGTVSSVGVLPNSQSLETVGWFASD 221
>At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 717
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = +3
Query: 84 LSYSTETTNTRSHSCRRTSQARRLQARKDSTGAWFNS*SKKTRICQTVF*IRGCLTSPNL 263
+S S E CR + +RRL R+D +GA+ + ++ + +R N
Sbjct: 601 VSSSIERLRNLHSMCRAVADSRRLIEREDLSGAYQVLTTARSNASHSDDSLRSLEVELNE 660
Query: 264 QSLDEPAKPVTEEPEDEYEINTPTA 338
S +P + ED+ E TPT+
Sbjct: 661 LSRIKPRNSILNRTEDKPEQLTPTS 685
>At3g20680.1 68416.m02617 expressed protein
Length = 338
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 223 PSFKSVDASPRQIFSHLMNLRNLLLKNQKMNTKLTLLQLFRPAATLHPNLKMTSTTSPPL 402
PS S+ +IF HL ++L ++ K+N K T +LF P L +L S++SPPL
Sbjct: 19 PSPPSLSPPNSRIF-HLHFSKSLSQQHSKLNHKSTTTRLFAP---LCSSLPSPSSSSPPL 74
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 4/82 (4%)
Frame = +3
Query: 252 SPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 431
+P++ S P P P TP TP + + T P PP +
Sbjct: 123 TPSVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVS 182
Query: 432 PFP----QSSPSPVKLDPIRPT 485
P P S PSP + P PT
Sbjct: 183 PPPPTPTPSVPSPPDVTPTPPT 204
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +3
Query: 249 TSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 428
+S N S P V PE N P + SS+ S P P ++S P PP+
Sbjct: 114 SSSNPNSNPNPPVTVPNPPESSSNPNPPDS-SSNPNSNPNPPE------SSSNPNPPVTV 166
Query: 429 NPFPQSSPSP 458
P+SS +P
Sbjct: 167 PNPPESSSNP 176
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQP-KPPIIFN 431
P S P + V PE Y TP YS P P I + S PPI++
Sbjct: 194 PPESSSPNPPEIVPSPPESGY---TPGPVLGPPYSEPGPSTPTGSIPSPSSGFLPPIVYP 250
Query: 432 PFPQSSPSP 458
P P + PSP
Sbjct: 251 P-PMAPPSP 258
>At5g52740.1 68418.m06546 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 118
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 201 KKTRICQTVF*IRGCLTSPNLQSLDEPAKPVTEEPEDEYEINTP 332
K +IC T F G + P + D+P KP T+ P+ Y P
Sbjct: 53 KLKKICHTEFISVGPVKEPEKKKPDDPKKPETKPPDVIYHYVPP 96
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 303 PEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRP 482
P Y ++P YS P P ++ I+ P P I +P PQS P ++ P P
Sbjct: 704 PPAPYYYSSPQPPPPPHYSLPPPTPTYHYISPPPPPTP--IHSPPPQSHPPCIEYSPPPP 761
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 360 TPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQY 491
+P PQ+ I + P P + +NP P SP+ P P Y
Sbjct: 744 SPPPQSHPPCIEYSPPPPPTVHYNPPPPPSPAHYSPPPSPPVYY 787
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P PV P P +S P P Y S P PP+ +P P SP+P
Sbjct: 475 PPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVY-----SPPPPPVYSSPPPPPSPAP 529
Query: 459 VKLDPIRP 482
+ RP
Sbjct: 530 TPVYCTRP 537
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 258 NLQSLDEPAKPVTEE-PEDEYEINTPTAFSS--SGYSTPEPQNDFYDITTTSQPKP 416
N +L+EP+KP EE P+ + P S S P+P++ + T QPKP
Sbjct: 425 NPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKP 480
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 273 DEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQ---PKPPIIFNPFPQ 443
+E KP +PE+ + P + +P+PQ + + P+PP P P+
Sbjct: 520 EESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPE 579
Query: 444 SSPSP 458
SP P
Sbjct: 580 ESPKP 584
>At5g43820.1 68418.m05358 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 680
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 206 LLTLGIEPGTGAILPCLKPPCLTGPP 129
+L+ G+ P TG + LKP C GPP
Sbjct: 386 MLSRGVLPTTGLVTSFLKPLCSYGPP 411
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 PNLQSLDEPAK--PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 428
P L L P+ T P + + TP+A PQ+ +S P PP++
Sbjct: 5 PPLPILSPPSSNSSTTAPPPLQTQPTTPSAPPPVTPPPSPPQSP--PPVVSSSPPPPVVS 62
Query: 429 NPFPQSSPSP 458
+P P SSP P
Sbjct: 63 SPPPSSSPPP 72
>At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 408
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 330 PTAFSSSGYSTPEPQNDFY----DITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYR 494
P +SS +S+ P +D + T+ + P PPI+ P SSPS + P P R
Sbjct: 7 PEWLNSSLWSSSPPIDDRHLRNPAATSITPPSPPIVERPPFSSSPSAISTAPAPPLPVR 65
>At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 449
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 330 PTAFSSSGYSTPEPQNDFY----DITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYR 494
P +SS +S+ P +D + T+ + P PPI+ P SSPS + P P R
Sbjct: 7 PEWLNSSLWSSSPPIDDRHLRNPAATSITPPSPPIVERPPFSSSPSAISTAPAPPLPVR 65
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = +2
Query: 437 PTIFS*PCQARSHPSHAIQTVFTHPFNPIRNEPINKPQPARIQPLSNRPQRPIFRPETKP 616
PT+ P P TV HP P P KP P + P P+ PI +P TKP
Sbjct: 68 PTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKP-PTKPHP---HPKPPIVKPPTKP 123
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 476 PSHAIQTVFTHPFNPIRNEPINKPQPARIQPLSNRPQRPIFRPETKP 616
PS A HP P + + P+P ++P + +P P +P KP
Sbjct: 32 PSPAPHKPPKHPVKPPKPPAVKPPKPPAVKPPTPKP--PTVKPHPKP 76
>At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family
protein similar to proline-rich cell wall protein
[Gossypium barbadense] gi|451544|gb|AAA79364; contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 124
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Frame = +3
Query: 390 ITTTSQPKPPIIFNPFPQSS--PSPVKLDPIRPTQYRXXXXXXXXXXETNQLTNLNLPEF 563
+TTT P P PFP S+ P P P+ +Q N +N+P F
Sbjct: 38 VTTTFPPLPTTTMPPFPPSTSLPQPTAFPPLPSSQIPSLPNPAQPINIPN-FPQINIPNF 96
Query: 564 -----NHFPIDL 584
N+FP +L
Sbjct: 97 PISIPNNFPFNL 108
>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 799
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 INTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPI-RPTQYR 494
+NT + + SG P P D + + PP +P P S PS + P+ RP+ R
Sbjct: 88 VNTDLS-ACSGSGAPPPPPDLFPPPSAQMLPPPPASSPAPPSPPSSSRPRPLPRPSMSR 145
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 252 SPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 431
SP + P P TE P +++P SS P P + T + P PP
Sbjct: 93 SPPPEPSPPPPLP-TEAPPPANPVSSPPPESSP---PPPPPTEAPPTTPITSPSPPTNPP 148
Query: 432 PFPQSSPSPVKLDP 473
P P+S PS DP
Sbjct: 149 PPPESPPSLPAPDP 162
>At5g12440.1 68418.m01462 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 552
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 258 NLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPF 437
NLQ L E VT + + +P FSS+G +P+ Q++ + +P+
Sbjct: 409 NLQ-LPEFKNSVTLNHHRSFSVGSPGYFSSAGNQSPDFQSELNGADALKVTDDTLELHPY 467
Query: 438 PQSSPSPV 461
P +P V
Sbjct: 468 PVVNPMSV 475
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT---SQPKPPIIFNPFPQSS 449
P++P P ++T T+FS S P P + TT+ SQP PP F
Sbjct: 501 PSQPPPPPPPPPLFMST-TSFSPSQPPPPPPPPPLFTSTTSFSPSQPPPPPPLPSFSNRD 559
Query: 450 PSPVKLDPIRPT 485
P PI T
Sbjct: 560 PLTTLHQPINKT 571
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 264 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT-----SQPKPPIIF 428
QS EP V ++ +N T SS S ++ F I+ + S+PKPP+I
Sbjct: 260 QSGREPLNRVGLPGQNPRSVNNDTISCSSSSSGSPGRSTFISISPSMSPKRSEPKPPVIS 319
Query: 429 NPFP 440
P P
Sbjct: 320 TPEP 323
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 330 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 485
P ++ +TP P + D P+P P P+S P +LD RPT
Sbjct: 242 PPRLDAARPTTPRPPSPLADAPRLDAPRPTTPKPPSPRSDPP--RLDAPRPT 291
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 330 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 485
P ++ +TP P + D P+P P P+S P +LD RPT
Sbjct: 241 PPRLDAARPTTPRPPSPLADAPRLDAPRPTTPKPPSPRSDPP--RLDAPRPT 290
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/71 (26%), Positives = 26/71 (36%)
Frame = +3
Query: 270 LDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 449
L +P P P + PT S P I + PP+ P P S
Sbjct: 408 LQKPPTPTYSPPIKLPPVKPPTPIYSPPVKPPPVHKPPTPIYSPPVKPPPVHKPPTPTYS 467
Query: 450 PSPVKLDPIRP 482
P P+K P++P
Sbjct: 468 P-PIKPPPVKP 477
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P P T P P A + S P P TT+ PP P P SSP P
Sbjct: 23 PTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTA---PPPANPPPPVSSPPP 79
Query: 459 VKLDPIRP 482
P P
Sbjct: 80 ASPPPATP 87
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P P T P P A + S P P TT+ PP P P SSP P
Sbjct: 23 PTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTA---PPPANPPPPVSSPPP 79
Query: 459 VKLDPIRP 482
P P
Sbjct: 80 ASPPPATP 87
>At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family
protein similar to proline-rich protein precursor
GB:AAC34889 [Glycine max]
Length = 388
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +3
Query: 240 GCLTSPNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPP 419
G + P + EP ++P+ ++ P + S+ + ++ T QP+ P
Sbjct: 64 GMVQPPQVTPKVEPQ--AVQQPQQSHQSIPPKPNVQAHMSSFQGGGSVHEPANTMQPQAP 121
Query: 420 IIFNPFPQSSPSP 458
I +P PQ P P
Sbjct: 122 IRKHPTPQPMPMP 134
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +3
Query: 249 TSPNLQSLDEPAKPVTEEPE-DEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPII 425
T+P + + PA PVT P P +TP PQ + PP +
Sbjct: 57 TTPPVSAAQPPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPV 116
Query: 426 FNPFPQSSPSPVKLDP 473
P +SP P P
Sbjct: 117 SPPPAPTSPPPTPASP 132
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 264 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQND---FYDITTTSQPKPPIIFNP 434
Q L P +P + E P + + +S P P + F IT P PP +P
Sbjct: 314 QKLPPPVQPPPLRGLESDEQELPYSQNKPKFSQPPPPPNRAAFQAITQEKSPVPPPRRSP 373
Query: 435 FP-QSSPSPVKLDPIRP 482
P Q+ P P P+ P
Sbjct: 374 PPLQTPPPPPPPPPLAP 390
>At5g37060.1 68418.m04448 cation/hydrogen exchanger, putative
(CHX24) similar to Na+/H+-exchanging protein NapA -
Enterococcus hirae, PIR:A42111; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 859
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 741 WFLFSGISWAVFLLCVSNGGADWLLS 664
WFL S + +A F+L V DW++S
Sbjct: 262 WFLVSVVIFAAFMLLVVRRAFDWIVS 287
>At5g18440.1 68418.m02172 hypothetical protein
Length = 451
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = +3
Query: 255 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNP 434
P L S + P P ++ P G+S P PQ D T S P N
Sbjct: 121 PQLNSFNSLPYPPVPNPHQNHQSGPP------GFSEPRPQGQSVDNTNGSGPNGNDFRNK 174
Query: 435 FPQ 443
FP+
Sbjct: 175 FPK 177
>At5g22760.1 68418.m02658 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1566
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 524 RNEPINKPQPARIQPLSNRPQRPIF 598
R P +P+P + +SNR +RP+F
Sbjct: 9 RGRPRKRPRPEDLNGVSNRGKRPVF 33
>At3g30230.1 68416.m03820 myosin heavy chain-related similar to
Myosin heavy chain, non-muscle (Zipper protein) (Myosin
II)(SP:Q99323) {Drosophila melanogaster}
Length = 527
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 682 APVRNTQQKYSPTNTREKEPVAQIIRK 762
+P RN+ +YSP N +PVA +IRK
Sbjct: 170 SPHRNSP-RYSPRNRLSSKPVADLIRK 195
>At3g18890.1 68416.m02399 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 641
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = +3
Query: 279 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 458
P KPVT+EP E P + P P + + P PI P +S SP
Sbjct: 349 PTKPVTQEPTAPKEDEAPPKEKN---VKPRPLSPYASYEDLKPPTSPI---PNSTTSVSP 402
Query: 459 VKLDPIRPTQ 488
K + TQ
Sbjct: 403 AKSKEVDATQ 412
>At2g24060.1 68415.m02874 translation initiation factor 3 (IF-3)
family protein similar to SP|P33319 Translation
initiation factor IF-3 {Proteus vulgaris}; contains Pfam
profiles PF00707: Translation initiation factor IF-3,
C-terminal domain, PF05198: Translation initiation
factor IF-3, N-terminal domain
Length = 312
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +3
Query: 255 PNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNP 434
PN + + +P +P T + + E N +A ++ + PEP+ + +P+P P
Sbjct: 250 PNKEMIRKPQEPPTRKKKKTAE-NEASASAAEITAEPEPEPE-----PEPEPEP----EP 299
Query: 435 FPQSSPSPVKLD 470
P+ P P+++D
Sbjct: 300 EPEPEPEPLQID 311
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,175,159
Number of Sequences: 28952
Number of extensions: 402133
Number of successful extensions: 1742
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1688
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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