Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30412
(876 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 124 9e-29
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 102 4e-22
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 1e-17
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 79 5e-15
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 58 7e-09
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 53 4e-07
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 52 5e-07
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 52 6e-07
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 51 1e-06
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 50 2e-06
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 50 3e-06
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 47 2e-05
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 41 0.002
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 39 0.005
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 38 0.011
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 32 0.70
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 30 2.8
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30) 29 4.9
SB_2584| Best HMM Match : SPRY (HMM E-Value=0.014) 29 4.9
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 28 8.6
SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 8.6
SB_41762| Best HMM Match : Tom22 (HMM E-Value=5.3) 28 8.6
SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 8.6
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 8.6
SB_20221| Best HMM Match : RVT_1 (HMM E-Value=0.00045) 28 8.6
SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5) 28 8.6
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 8.6
SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8) 28 8.6
SB_32624| Best HMM Match : rve (HMM E-Value=0.00042) 28 8.6
SB_23778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18) 28 8.6
SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068) 28 8.6
SB_1704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 124 bits (299), Expect = 9e-29
Identities = 52/87 (59%), Positives = 68/87 (78%)
Frame = +2
Query: 242 LRRHLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPI 421
L + LK HLLS ++P DW +KPVKVL NFDEV + K V VEFYAPWCGHCKQL PI
Sbjct: 364 LDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPI 423
Query: 422 YDKLGEHFENDDDVIIAKIDATANELE 502
+D+LGE +++ D+++AK+D+TANE+E
Sbjct: 424 WDQLGEKYKDHADIVVAKMDSTANEVE 450
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/71 (40%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 AKTYRDRIMTVAIDADEDEHQRILEFFGMKKDEVPSARLIAL-EQDMAKYKPSSNELSPN 215
AK ++ +++ V ++ + +++QRI+EFFG++ E+P+ RLI L + DM KYKP++ E++
Sbjct: 295 AKDFKGKVLFVYVNTEVEDNQRIVEFFGIQSSELPTIRLINLADDDMTKYKPTAAEITSE 354
Query: 216 AIEEFVQSFFD 248
++EFVQ+F D
Sbjct: 355 NVKEFVQAFLD 365
Score = 67.3 bits (157), Expect = 2e-11
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEND-DDVIIAKIDA 484
V VL NFDE V K VLVEFYAPWCGHCK L P Y K +++ ++ +AK+DA
Sbjct: 26 VLVLTEKNFDEAVA-ANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDA 84
Query: 485 TA 490
TA
Sbjct: 85 TA 86
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = +1
Query: 508 QITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGE-GAEPVPSVTEFEEE---EDVP 675
++ SFPTIK + K+ + DYNG RTL KF+E+ G+ G EP E E +D+P
Sbjct: 453 KVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGKAGNEPAAEGEEPPPEGEGDDLP 512
Query: 676 ARD 684
+
Sbjct: 513 PEE 515
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 102 bits (244), Expect = 4e-22
Identities = 47/81 (58%), Positives = 59/81 (72%)
Frame = +2
Query: 254 LKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKL 433
LK H+ SE LP PVKV+V NF E+V D TK VL+EFYAPWCGHCK L P Y++L
Sbjct: 847 LKPHIKSEPLPESNDG-PVKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNEL 905
Query: 434 GEHFENDDDVIIAKIDATANE 496
GE ++ D++IAK+DATAN+
Sbjct: 906 GEKLQDVKDIVIAKMDATAND 926
Score = 55.2 bits (127), Expect = 7e-08
Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDAT 487
+LVEF+APWCGHCK+L P Y+ E +ND V +AK+D T
Sbjct: 558 MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCT 599
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 511 ITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETD-GEGAEPVPSVTEFEEEED 669
++ +PT+K++ DY+G R +G+ ++++ G + + SV E++ D
Sbjct: 611 VSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPSSVEIKSVDHLEKKLD 664
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 87.8 bits (208), Expect = 1e-17
Identities = 43/86 (50%), Positives = 58/86 (67%)
Frame = +2
Query: 251 HLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDK 430
+LK + S+ +P +PV V+V FDE+V D K VL+EFYAPWCG L P + K
Sbjct: 509 NLKPIIKSQPVPKS-NKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCGIA--LEPTFKK 565
Query: 431 LGEHFENDDDVIIAKIDATANELEHT 508
LG+HF ND +++IAKIDATAN++ T
Sbjct: 566 LGKHFRNDKNIVIAKIDATANDVPST 591
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE-NDDDVIIAKIDA 484
V VL + NFD V+ + +LVEFYAPWCGHCK L P Y K + + ND V AK+DA
Sbjct: 63 VSVLNSKNFDRVI-EENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDA 121
Query: 485 T 487
T
Sbjct: 122 T 122
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +2
Query: 290 DWAAKPVKVLVAA--NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDV 463
+W PV L NF EVV + +LVEF+APWCGHCKQL P Y+K + + D
Sbjct: 170 NWKPPPVAALTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPP 228
Query: 464 I-IAKIDAT 487
I +A +DAT
Sbjct: 229 IPLAIVDAT 237
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 79.0 bits (186), Expect = 5e-15
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 484
L NFDEVV + K LVEFYAPWCGHCKQL P Y++LGE + DVIIAK+DA
Sbjct: 27 LTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDA 81
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 58.4 bits (135), Expect = 7e-09
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +2
Query: 350 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 487
+ T+ VLV FYAPWCGHCK P Y+K E F++ + + AK+D T
Sbjct: 162 NNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCT 207
Score = 48.4 bits (110), Expect = 8e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +2
Query: 287 ADWAAKPVKV--LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDD- 457
+DW+ KV L + DE + + + VLV ++APWCGHC ++ P Y K + ++D
Sbjct: 43 SDWSKDDSKVVFLTDESHDEFI-KSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDA 101
Query: 458 DVIIAKIDATANE 496
+ +A +D T ++
Sbjct: 102 NCNLAAVDCTKHK 114
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +1
Query: 508 QITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEGAEPVPSVTEFEEEED 669
++ +PT++ Y V +Y+G+R L F+E E P+ + + ++E++
Sbjct: 217 EVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFME---EPPLPLSDIPKDQQEKN 267
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 52.8 bits (121), Expect = 4e-07
Identities = 21/52 (40%), Positives = 36/52 (69%)
Frame = +2
Query: 329 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 484
N DE V D +K V + FYAPW HC++++ I+D++ + F + DD+++ K +A
Sbjct: 35 NVDEYV-DGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNA 85
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 227 IRSIVLRRHLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCK 406
IR I R +LK + DLP + L +NF+ VV + K VLV +Y C C
Sbjct: 126 IRFIAARSYLKLNKAMFDLP-------LIELEKSNFERVVKNRAKDVLVFYYNGNCKLCD 178
Query: 407 QLV-PIY 424
Q+ P Y
Sbjct: 179 QMAYPYY 185
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 52.4 bits (120), Expect = 5e-07
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 329 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANEL 499
+FD++V + + VL+ FY PWCG C P+ + F++ V + +IDA N+L
Sbjct: 526 SFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQNDL 582
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 52.0 bits (119), Expect = 6e-07
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = +2
Query: 371 VEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
V+FYAPWC HC +L PI+++L E F+++ D+ I+KI+
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFKDNADITISKIN 147
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 508 QITSFPTIKLYSKDNQVHDYNGERTLAGLTKFV 606
+I +PT+ L+ Q +Y+G R L L +F+
Sbjct: 145 KINGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 51.6 bits (118), Expect = 8e-07
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 326 ANFDEVVFDTTKK-VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELE 502
A F+ V+ +T K V+++FYA WCG C+Q+ P + K+ E DV AKID ELE
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA--LEEFKDVFFAKIDVDELELE 76
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +2
Query: 326 ANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEH--FENDDDVIIAKIDATANEL 499
+NF+ V K VLV+FYAPWC HCK++ P Y + + + + V +AK+D +AN +
Sbjct: 142 SNFEPAV-QKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNM 200
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 290 DWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVI 466
D A+ V L NF+E + + VLV+FYAPWC C++L P++D +N+ +
Sbjct: 47 DPASPAVLNLNDQNFNETI-KKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLR 105
Query: 467 IAKIDATANE 496
AK+ + +E
Sbjct: 106 FAKVIYSIDE 115
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 496
L NF++ V ++ LVEF+APWCGHC++L P + K + V + +DAT +
Sbjct: 84 LTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKG--KVKVGALDATVHT 141
Query: 497 LEHTR 511
+ +R
Sbjct: 142 VTASR 146
Score = 35.5 bits (78), Expect = 0.057
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 499 GTHQITSFPTIKLYSKD-NQVHDYNGERTLAGL 594
G + I FPTIK++ + N DYNG+RT G+
Sbjct: 9 GPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGI 41
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAK 475
+LVEF+APWCGHCK+L P Y+ E +ND V +AK
Sbjct: 33 MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 293 WAAKPVKVLVAAN--FDEVVFDTTKKVLVEFYAPWCGHCKQLVPIY-DKLGEHFENDDDV 463
W+ P +V+ + FD+ V VLV FYAPWCGHCK + P Y D E +
Sbjct: 77 WSDTPSEVVHLRDDMFDDFVAKNPS-VLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPG 135
Query: 464 IIAKIDAT 487
++A +DAT
Sbjct: 136 VLAAVDAT 143
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 DWAAKPVKVLVAANFDEVVFDTTKK-VLVEFYAPWCGHCKQLVPIYDKLGEHFEN 451
+W+ P +V ++ F KK VLV FYAPWCGHCK+ P +H ++
Sbjct: 189 EWSEIPSEVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAAKHHKD 243
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 305 PVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 484
P+ L +FD + D + +LV+FYAPWC C L P Y+K + ++AK
Sbjct: 23 PIFELTDQDFDNFLKDK-EVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALM 81
Query: 485 TANELEHT 508
N + T
Sbjct: 82 NTNSTQTT 89
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 44.0 bits (99), Expect = 2e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 487
L A NFD+++ + +LV+FYAPWC HC++L+P + AK+D T
Sbjct: 25 LNAQNFDQMIREKDI-MLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCT 80
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 508 QITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVET 612
+I +P++KL+ DY G+RT A L ++E+
Sbjct: 92 KIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMES 126
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 356 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
TK V+ +F A WCG CK + P+Y L E ++ + KID
Sbjct: 27 TKLVVADFTASWCGPCKSIAPVYSGLSEKYK---QAVFLKID 65
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 356 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANEL 499
++ V+++F A WCG CK + P++ L F DV+ K+D +L
Sbjct: 28 SRLVVIDFTATWCGPCKSIAPVFTNLSMKFM---DVVFLKVDVDQCQL 72
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 329 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGE 439
NF V + +V+FYAPWCG C + P Y++L +
Sbjct: 442 NFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAK 478
Score = 37.1 bits (82), Expect = 0.019
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 445
V L +F V ++ V+F+APWC C +L+P Y K F
Sbjct: 286 VHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSF 331
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.9 bits (84), Expect = 0.011
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +2
Query: 332 FDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTR 511
FD+ + D + ++F A WCG C+ + P ++++ + F+ V AK+D N +E R
Sbjct: 4 FDKFLKDN-EVAAIDFTATWCGPCRMIGPKFEEMAKEFKG---VKCAKVDVDVNSVEVLR 59
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 329 NFDEVVFDTTKKV-LVEFYAPWCGHCKQLVPIYDKLGE 439
+FD ++ ++ + +V F+APW HC Q+ + ++L +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAK 48
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 359 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDD-DVIIAKIDATANE 496
K + V F A WC C+Q PI E ++ D++I + + +E
Sbjct: 26 KVIAVYFSAHWCPPCRQFTPILKDFYEELGGEEGDLVIIFVSSDRDE 72
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 15 YLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGM---KKDEVP-SARLIALEQDMAK 182
Y+ + +A+ R+ + DAD +EHQ +E G+ +E P SA +I ++ D +
Sbjct: 659 YMVEAPEIAEM-ESRVASSVKDADTEEHQSPMELSGVDTNASEENPQSAEVIEIQPDQVQ 717
Query: 183 YKP 191
KP
Sbjct: 718 EKP 720
>SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30)
Length = 1152
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +2
Query: 233 SIVLRRHLKQHLLSEDLPADWAAKPVKVLVA-ANFDEVVFDTTKKVLVEFYAPWCGHCKQ 409
S+ RH+ + E L AK L A + F ++ +L F P+ C
Sbjct: 463 SVKRERHILPSV-DETLAQLGGAKVFSKLDANSGFHQIPLSKESTLLTTFITPFGRFCYN 521
Query: 410 LVPI-YDKLGEHFENDDDVIIAKIDATANELEHT 508
+P EHF+ ++A ++ TAN ++ T
Sbjct: 522 RLPFGITSAPEHFQKRMTSVLAGVEGTANMIDDT 555
>SB_2584| Best HMM Match : SPRY (HMM E-Value=0.014)
Length = 408
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 425 DKLGEHFENDDDVIIAKIDATANELEHTRSR 517
+K GEHF DD IAK+ EL +TR R
Sbjct: 97 EKFGEHFPGQDDANIAKV---YEELVNTRDR 124
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 704 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 736
>SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1017
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 391 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 423
>SB_41762| Best HMM Match : Tom22 (HMM E-Value=5.3)
Length = 568
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 151 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 183
>SB_35972| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 325
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 193 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 225
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 638 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 670
>SB_20221| Best HMM Match : RVT_1 (HMM E-Value=0.00045)
Length = 955
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 675 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 707
>SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 553 QVHDYNGERTLAGLTKFVETDGEGAEPVPSVTEF 654
+ DYNG++ G+ K + T EP+ S + F
Sbjct: 1338 KTEDYNGKKKAIGVNKQLRTSSHRREPLVSTSNF 1371
>SB_12746| Best HMM Match : DUF1379 (HMM E-Value=5.5)
Length = 398
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 131 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 163
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 52 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 84
>SB_54171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 10 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 42
>SB_48899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 168 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 200
>SB_36000| Best HMM Match : DUF1379 (HMM E-Value=4.8)
Length = 420
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 231 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 263
>SB_32624| Best HMM Match : rve (HMM E-Value=0.00042)
Length = 415
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 52 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 84
>SB_23778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 229 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 261
>SB_23421| Best HMM Match : rve (HMM E-Value=1.8e-18)
Length = 838
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 245 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 277
>SB_21695| Best HMM Match : RVT_1 (HMM E-Value=0.00068)
Length = 1502
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 958 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 990
>SB_1704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 93 EHQRILEFFGMKK-DEVPSARLIALEQDMAKYK 188
+H+ +L+ FG + DE+P++RL L++ +YK
Sbjct: 131 DHKPLLKVFGDRSLDEIPNSRLRNLKEKTLRYK 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,044,980
Number of Sequences: 59808
Number of extensions: 412049
Number of successful extensions: 1273
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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