Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30412
(876 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 100 3e-21
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 92 5e-19
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 92 5e-19
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 91 9e-19
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 88 8e-18
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 88 8e-18
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 84 1e-16
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 84 1e-16
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 64 1e-10
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 62 6e-10
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 60 1e-09
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 57 1e-08
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 50 2e-06
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 49 4e-06
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 49 5e-06
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 49 5e-06
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 49 5e-06
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 48 6e-06
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 48 6e-06
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 48 1e-05
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 46 3e-05
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 44 1e-04
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 43 2e-04
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 41 0.001
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 41 0.001
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 41 0.001
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 40 0.002
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 39 0.004
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 39 0.004
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 39 0.004
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 39 0.004
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 38 0.007
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 37 0.020
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 36 0.047
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 35 0.062
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 35 0.062
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 35 0.062
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 33 0.19
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 33 0.19
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 33 0.25
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 33 0.33
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 33 0.33
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 31 0.76
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 31 1.0
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 31 1.0
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 31 1.0
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 31 1.0
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 31 1.0
At4g21120.1 68417.m03054 amino acid permease family protein simi... 31 1.3
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 31 1.3
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 30 1.8
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 30 1.8
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 30 1.8
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 30 1.8
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 30 2.3
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 29 4.1
At4g31240.2 68417.m04435 expressed protein 29 5.4
At4g31240.1 68417.m04434 expressed protein 29 5.4
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 29 5.4
At5g18740.1 68418.m02224 expressed protein predicted proteins - ... 28 7.1
At3g49800.1 68416.m05445 BSD domain-containing protein contains ... 28 9.4
At3g30300.1 68416.m03826 expressed protein contains Pfam PF03138... 28 9.4
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 28 9.4
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 99.5 bits (237), Expect = 3e-21
Identities = 43/79 (54%), Positives = 61/79 (77%)
Frame = +2
Query: 263 HLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEH 442
H S+ +PA+ +PVKV+VA + D++VF + K VL+EFYAPWCGHC++L PI D++
Sbjct: 360 HKKSQPIPAE-NNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVALS 418
Query: 443 FENDDDVIIAKIDATANEL 499
F+ND VIIAK+DATAN++
Sbjct: 419 FQNDPSVIIAKLDATANDI 437
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDK-LGEHFENDDDVIIAKIDA 484
V L +NF E + ++VEFYAPWCGHC++L P Y+K E ++ + +AKIDA
Sbjct: 31 VLTLDHSNFTETI-SKHDFIVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDA 89
Query: 485 T 487
+
Sbjct: 90 S 90
Score = 31.9 bits (69), Expect = 0.58
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Frame = +1
Query: 502 THQITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGE------GAEPVPSVTEFEEE 663
T + FPTI S V Y G+RT FVE + E G E S E ++
Sbjct: 441 TFDVKGFPTIYFRSASGNVVVYEGDRTKEDFINFVEKNSEKKPTSHGEESTKS-EEPKKT 499
Query: 664 EDVPARDE 687
E+ A+DE
Sbjct: 500 EETAAKDE 507
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +3
Query: 30 KPVAKTYRDRIMTVAIDADEDEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELS 209
+ VA + +D+ + + D + Q ++FG+++ +VP +I D KY + E+
Sbjct: 287 REVATSNKDQSLAFLV-GDAESSQGAFQYFGLEESQVP--LIIIQTPDNKKYLKVNVEV- 342
Query: 210 PNAIEEFVQSFFDG 251
+ IE + + F DG
Sbjct: 343 -DQIESWFKDFQDG 355
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/78 (48%), Positives = 60/78 (76%)
Frame = +2
Query: 263 HLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEH 442
H S+ +PA+ +PVKV+V+ + D++V ++ K VL+EFYAPWCGHC++L PI D++
Sbjct: 362 HKKSQPIPAE-NNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVS 420
Query: 443 FENDDDVIIAKIDATANE 496
+++D V+IAK+DATAN+
Sbjct: 421 YQSDSSVVIAKLDATAND 438
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDAT 487
++VEFYAPWCGHCKQL P Y+K N V++AKIDA+
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDAS 91
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 84 DEDEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDG 251
D + Q ++FG+++ +VP +I D KY ++ E+ + IE +V+ F DG
Sbjct: 306 DAENSQGAFQYFGLEESQVP--LIIIQTADDKKYLKTNVEV--DQIESWVKDFKDG 357
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 91.9 bits (218), Expect = 5e-19
Identities = 38/78 (48%), Positives = 60/78 (76%)
Frame = +2
Query: 263 HLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEH 442
H S+ +PA+ +PVKV+V+ + D++V ++ K VL+EFYAPWCGHC++L PI D++
Sbjct: 362 HKKSQPIPAE-NNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVS 420
Query: 443 FENDDDVIIAKIDATANE 496
+++D V+IAK+DATAN+
Sbjct: 421 YQSDSSVVIAKLDATAND 438
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHF-ENDDDVIIAKIDAT 487
++VEFYAPWCGHCKQL P Y+K N V++AKIDA+
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDAS 91
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 502 THQITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEG-AEPVPSVTEFEEEED 669
T + FPTI S V Y G+RT FV+ + + EP EE +D
Sbjct: 443 TFDVKGFPTIYFKSASGNVVVYEGDRTKEDFISFVDKNKDTVGEPKKEEETTEEVKD 499
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 84 DEDEHQRILEFFGMKKDEVPSARLIALEQDMAKYKPSSNELSPNAIEEFVQSFFDG 251
D + Q ++FG+++ +VP +I D KY ++ E+ + IE +V+ F DG
Sbjct: 306 DAENSQGAFQYFGLEESQVP--LIIIQTADDKKYLKTNVEV--DQIESWVKDFKDG 357
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 91.1 bits (216), Expect = 9e-19
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +2
Query: 254 LKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKL 433
LK S+ LP + VKV+V NFDE+V D +K VL+E YAPWCGHC+ PIY+KL
Sbjct: 422 LKPFYKSDPLPENNDGD-VKVIVGNNFDEIVLDESKDVLLEIYAPWCGHCQSFEPIYNKL 480
Query: 434 GEHFENDDDVIIAKIDATANELEHTRSR 517
G++ + D +++AK+D T+N EH R++
Sbjct: 481 GKYLKGIDSLVVAKMDGTSN--EHPRAK 506
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/62 (43%), Positives = 33/62 (53%)
Frame = +2
Query: 302 KPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
K V VL NF E V + + +VEFYAPWCG C+ L P Y + +AKID
Sbjct: 99 KDVAVLTKDNFTEFVGNNSF-AMVEFYAPWCGACQALTPEYAAAATELKG--LAALAKID 155
Query: 482 AT 487
AT
Sbjct: 156 AT 157
Score = 35.5 bits (78), Expect = 0.047
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 9 EKYLEDLKPVAKTYRDRIMTVAIDAD-EDEHQRILEFFGMKKDEVPSARLIALEQDMAKY 185
EK+L L+ VAK+++ + + V + D ED + + FFG+ P + +DM K+
Sbjct: 341 EKHLPTLREVAKSFKGKFVFVYVQMDNEDYGEAVSGFFGV-TGAAPKVLVYTGNEDMRKF 399
Query: 186 KPSSNELSPNAIEEFVQSF 242
EL+ N I+ + F
Sbjct: 400 -ILDGELTVNNIKTLAEDF 417
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 505 HQITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEGAEPVPSVTEFEEEEDV 672
++I FPT+ L+ Y GERT G+ +++ + + + ++T EE E V
Sbjct: 166 YEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLKK--KASPSIHNITTKEEAERV 219
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +2
Query: 242 LRRHLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPI 421
L LK S+ +P + + VK++V NFDE+V D +K VL+E YAPWCGHC+ L P+
Sbjct: 422 LNDKLKPFYKSDPIP-EKNDEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPM 480
Query: 422 YDKLGEHFENDDDVIIAKIDATANE 496
Y+KL +H + D ++I K+D T NE
Sbjct: 481 YNKLAKHLRSIDSLVITKMDGTTNE 505
Score = 64.9 bits (151), Expect = 7e-11
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 272 SEDLPA-DWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 448
S+ LP + K V V+ NF +V+ + + VLVEFYAPWCGHC+ L P Y +
Sbjct: 92 SDPLPTPEIDEKDVVVIKERNFTDVI-ENNQYVLVEFYAPWCGHCQSLAPEYAAAATELK 150
Query: 449 NDDDVIIAKIDAT-ANEL 499
+D V++AKIDAT NEL
Sbjct: 151 -EDGVVLAKIDATEENEL 167
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +2
Query: 242 LRRHLKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPI 421
L LK S+ +P + + VK++V NFDE+V D +K VL+E YAPWCGHC+ L P+
Sbjct: 422 LNDKLKPFYKSDPIP-EKNDEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPM 480
Query: 422 YDKLGEHFENDDDVIIAKIDATANE 496
Y+KL +H + D ++I K+D T NE
Sbjct: 481 YNKLAKHLRSIDSLVITKMDGTTNE 505
Score = 64.9 bits (151), Expect = 7e-11
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 272 SEDLPA-DWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 448
S+ LP + K V V+ NF +V+ + + VLVEFYAPWCGHC+ L P Y +
Sbjct: 92 SDPLPTPEIDEKDVVVIKERNFTDVI-ENNQYVLVEFYAPWCGHCQSLAPEYAAAATELK 150
Query: 449 NDDDVIIAKIDAT-ANEL 499
+D V++AKIDAT NEL
Sbjct: 151 -EDGVVLAKIDATEENEL 167
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 487
V VL NFDE+V D K VLVEFYAPWCGHCK L P Y+K+ F+ ++ V+IA +DA
Sbjct: 143 VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDAD 202
Query: 488 ANE 496
A++
Sbjct: 203 AHK 205
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = +2
Query: 299 AKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKI 478
A V VL +F++ V K LVEFYAPWCGHCK+L P Y+KLG F+ V+IAK+
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKV 80
Query: 479 D 481
D
Sbjct: 81 D 81
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 511 ITSFPTIKLYSKDNQV-HDYNGERTLAGLTKFV 606
++ FPT+K + KDN+ HDY+G R L F+
Sbjct: 213 VSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFI 245
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 487
V VL NFDE+V D K VLVEFYAPWCGHCK L P Y+K+ F+ ++ V+IA +DA
Sbjct: 143 VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDAD 202
Query: 488 ANE 496
A++
Sbjct: 203 AHK 205
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/61 (52%), Positives = 40/61 (65%)
Frame = +2
Query: 299 AKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKI 478
A V VL +F++ V K LVEFYAPWCGHCK+L P Y+KLG F+ V+IAK+
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKV 80
Query: 479 D 481
D
Sbjct: 81 D 81
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 511 ITSFPTIKLYSKDNQV-HDYNGERTLAGLTKFV 606
++ FPT+K + KDN+ HDY+G R L F+
Sbjct: 213 VSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFI 245
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +2
Query: 272 SEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEN 451
S+ +P + A V V V FDEVV +++ VL+E + PWC +C+ L +KL +HF+
Sbjct: 407 SQPIPDNQNASVVAV-VGRTFDEVVLRSSENVLLEVHTPWCINCEALSKQVEKLSQHFKG 465
Query: 452 DDDVIIAKIDATANE 496
++++ A+IDA+ANE
Sbjct: 466 FENLVFARIDASANE 480
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 236 IVLRRHLKQHLLSEDLPADWAAKPVKVLVAANFDEV--VFDTTKKVLVEFYAPWCGHCKQ 409
+ + L++ + A+ +K +++V N D + D + V+V YAPWC +
Sbjct: 50 LAVDEQLQEERPEQQSEAETVSKAQRIVVELNGDNTKRLIDGNEYVMVLGYAPWCARSAE 109
Query: 410 LVPIYDKLGEHF-ENDDDVIIAKID 481
L+P + + E V++AKID
Sbjct: 110 LMPRFAEAATDLKEIGSSVLMAKID 134
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 61.7 bits (143), Expect = 6e-10
Identities = 31/86 (36%), Positives = 54/86 (62%)
Frame = +2
Query: 254 LKQHLLSEDLPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKL 433
+ ++ SE +P + A V V V FD +V ++ + VL+E + PWC +C+ L +KL
Sbjct: 402 VSRYYRSEPVPDNENASIVTV-VGKTFDGLVLNSRENVLLEVHTPWCVNCEALSKQIEKL 460
Query: 434 GEHFENDDDVIIAKIDATANELEHTR 511
+HF+ ++++ A+IDA+AN EHT+
Sbjct: 461 AKHFKGFENLVFARIDASAN--EHTK 484
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 DFEKYLEDLKPVAKTYRDRIMTVAID-ADEDEHQRILEFFGMKKDEVPSARLIALEQDM- 176
DF+K + L+ +A+ ++ ++M + +D +E+ L FG++ + A + ++
Sbjct: 319 DFQKLAQPLEDIARKFKSKLMFIYVDITNENLAMPFLILFGIEAGN--KTVVAAFDNNLN 376
Query: 177 AKYKPSSNELSPNAIEEFVQSFFDGT 254
+KY S+ SPN+IEEF GT
Sbjct: 377 SKYLLESDP-SPNSIEEFCSGLAHGT 401
Score = 35.5 bits (78), Expect = 0.047
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Frame = +2
Query: 269 LSEDLP-----ADWAAKPVKVLVAANFDEV--VFDTTKKVLVEFYAPWCGHCKQLVPIYD 427
L ED P A+ +K ++++ N D V D + V+V YAPWC +L+P +
Sbjct: 58 LQEDRPEQQSEAETVSKAQRIVLELNGDYTKRVIDGNEFVMVLGYAPWCARSAELMPRFA 117
Query: 428 KLGEHF-ENDDDVIIAKID 481
+ E V++AKID
Sbjct: 118 EAATALKEIGSSVLMAKID 136
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +2
Query: 296 AAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAK 475
++ PV L A+NF V ++ VLVEF+APWCGHCK L P ++K+ + +A
Sbjct: 28 SSSPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANILKG--VATVAA 85
Query: 476 IDATANE 496
IDA A++
Sbjct: 86 IDADAHQ 92
Score = 54.0 bits (124), Expect = 1e-07
Identities = 19/44 (43%), Positives = 33/44 (75%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 448
L A+NFD++V ++ + +VEF+APWCGHCK+L P + + ++ +
Sbjct: 167 LNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQ 210
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 296 AAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAK 475
++ PV L +NF V ++ VLVEF+APWCGHC+ L P ++K+ + +A
Sbjct: 26 SSSPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTLKG--IATVAA 83
Query: 476 IDATANE 496
IDA A++
Sbjct: 84 IDADAHK 90
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 448
L ++NFDE+V ++ + +VEF+APWCGHCK+L P + K + +
Sbjct: 168 LNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLK 211
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +2
Query: 329 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
+FD+++ ++ K VLV+FYA WCG C+ +VPI +++ E + D + + KID
Sbjct: 67 SFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLK--DIIAVVKID 115
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT 487
+K + + F V ++ + VLVEF A WCG CK + P + L + E D + I KID
Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQ--EYGDKLTIVKIDHD 128
Query: 488 AN 493
AN
Sbjct: 129 AN 130
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 281 LPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDD 460
+P + V L F + + + V+F PWC HCK+L +++ LG+ E DD+
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 461 VIIAKID 481
+ + ++D
Sbjct: 78 IEVGEVD 84
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 508 QITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEGA 627
+I S+PT L+ +V Y G+R + L FV + E A
Sbjct: 96 EIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKA 135
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 281 LPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDD 460
+P + V L F + + + V+F PWC HCK+L +++ LG+ E DD+
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 461 VIIAKID 481
+ + ++D
Sbjct: 78 IEVGEVD 84
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 508 QITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEGA 627
+I S+PT L+ +V Y G+R + L FV + E A
Sbjct: 96 EIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKA 135
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 281 LPADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDD 460
+P + V L F + + + V+F PWC HCK+L +++ LG+ E DD+
Sbjct: 18 IPIELVKAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDE 77
Query: 461 VIIAKID 481
+ + ++D
Sbjct: 78 IEVGEVD 84
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 508 QITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEGA 627
+I S+PT L+ +V Y G+R + L FV + E A
Sbjct: 96 EIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKA 135
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 48.4 bits (110), Expect = 6e-06
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 445
++V+ + +D +V T V+V+F+APWCG CK + P+ + L +H+
Sbjct: 82 IQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHY 127
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEN-DDDVIIAKIDA 484
L +NFD + T + V+FYAPWCGHCK+L P D ++IAK++A
Sbjct: 37 LTDSNFDSAI-STFDCIFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNA 92
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/51 (37%), Positives = 36/51 (70%)
Frame = +2
Query: 329 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
+F++++ ++ K VLV++YA WCG C+ +VPI +++ E + D + + KID
Sbjct: 72 SFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLK--DKIQVVKID 120
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +2
Query: 296 AAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 445
AA V L + + V ++ VLVEF+APWCG C+ + PI D+L + F
Sbjct: 84 AAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDF 133
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 299 AKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 445
A + V+ + +D +V + V V+F+APWCG CK + PI ++L + +
Sbjct: 73 ATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKY 121
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKK-VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDV 463
L NFD V+ DT K +VEF+A WC C+ P Y+K+ F D +
Sbjct: 40 LNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVARLFNGPDAI 89
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLV-EFYAPWCGHCKQLVPIYDKLGEHFENDDDV 463
L A NFD V D+ K V EF+A WC C+ P Y+K+ F D V
Sbjct: 46 LNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLFNGADAV 95
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLV-EFYAPWCGHCKQLVPIYDKLGEHFENDDDV 463
L A NFD V D+ K V EF+A WC C+ P Y+K+ F D V
Sbjct: 46 LNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLFNGADAV 95
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 359 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
K V+++ Y WCG CK + P Y L E + DDV+ K+D
Sbjct: 88 KLVVLDMYTQWCGPCKVIAPKYKALSEKY---DDVVFLKLD 125
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 338 EVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELE 502
E K +VEFYA WC C++L P K+ + +++ + ++ +D T E E
Sbjct: 132 EEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQE 186
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Frame = +2
Query: 317 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHF------ENDDDVIIAKI 478
L NFD V V FYAPWC C L P ++K + E D VI+AK+
Sbjct: 146 LTGRNFDTFTHQFPILV-VNFYAPWCYWCNLLKPSWEKAAKQIKERYDPEMDGRVILAKV 204
Query: 479 DAT 487
D T
Sbjct: 205 DCT 207
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 308 VKVLVAANFDEVVFDTTK-KVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 484
VK L A E+V K ++V+FYA WCG C + + L +E+ + II K+D
Sbjct: 77 VKKLSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYES--NAIIVKVD- 133
Query: 485 TANELEHTR 511
T +E E R
Sbjct: 134 TDDEYEFAR 142
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 350 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
DT K +++EF A WCG CK L P ++L + DV KID
Sbjct: 57 DTNKLLVIEFTAKWCGPCKTLEPKLEELAAKY---TDVEFVKID 97
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 287 ADWAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEND 454
ADW+ + + E+ T V+V F A WCG C+ ++PI +K+ ++N+
Sbjct: 205 ADWSGLIAWLPLLLRITELN-SQTPHVMVMFTARWCGPCRDMIPILNKMDSEYKNE 259
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 359 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
K V+++ Y WCG CK + P Y +L E ++ D++ K+D
Sbjct: 98 KIVVLDMYTQWCGPCKVIAPKYKELSEKYQ---DMVFLKLD 135
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +2
Query: 329 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
+F+E+ ++ K ++V+F A WCG C+ + P + + F ND D + +D
Sbjct: 39 HFNEIK-ESNKLLVVDFSASWCGPCRMIEPAIHAMADKF-NDVDFVKLDVD 87
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 368 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTRSRPS 523
++ + A WCG C Q++P + KL F + + A ID H R P+
Sbjct: 47 VINYGASWCGVCSQILPAFRKLSNSF-SKLKFVYADIDECPETTRHIRYTPT 97
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 329 NFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKL 433
++++ V + VLVEFY WCG C+ + I D++
Sbjct: 75 SWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEI 109
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 350 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
++ K ++++F A WC C+ + P++ ++ + F N V+ KID
Sbjct: 25 ESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTN---VVFFKID 65
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 350 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
++ K ++++F A WC C+ + PI++ L + F + I K+D
Sbjct: 26 ESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMS--SAIFFKVD 67
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 496
V+VEFY WC C+ L P KL + D++ K++ N+
Sbjct: 126 VIVEFYGTWCASCRALFP---KLCKTAVEHPDIVFLKVNFDENK 166
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 496
V+VEFY WC C+ L P KL + D++ K++ N+
Sbjct: 126 VIVEFYGTWCASCRALFP---KLCKTAVEHPDIVFLKVNFDENK 166
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
V+V+F A WCG C+ + P + L + N V+ K+D
Sbjct: 31 VVVDFTASWCGPCRFIAPFFADLAKKLPN---VLFLKVD 66
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE 496
V+V+FY WCG C+ + P KL + + +++ K++ N+
Sbjct: 116 VIVDFYGTWCGSCRAMFP---KLCKTAKEHPNILFLKVNFDENK 156
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 368 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTR 511
+V YAPWC C+ + YD+L + + +AK A ++ E +
Sbjct: 377 IVVLYAPWCPFCQAMEASYDELADKLAG-SGIKVAKFRADGDQKEFAK 423
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.76
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 350 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEND 454
++ + +LV + +P CG C+ L PI +K+ + + +D
Sbjct: 440 ESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHD 474
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
V+++FY+P CG CK L P K+ + E + +V+ K++
Sbjct: 108 VVLDFYSPGCGGCKSLHP---KICQLAETNPNVMFLKVN 143
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 350 DTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
++ K ++++F A WC C+ + P++ L + DV+ K+D
Sbjct: 25 ESKKLIVIDFTATWCPPCRFIAPVFADLA---KKHLDVVFFKVD 65
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 356 TKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
++ +++ F A WCG C+ + P+Y L V+ K+D
Sbjct: 292 SRLLILYFTATWCGPCRYMSPLYSNLATQHSR---VVFLKVD 330
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 359 KKVLVEFYAPWCGHCKQLVPIYDKLGE 439
K V+ F A WCG CK + P + +L E
Sbjct: 46 KIVVANFSATWCGPCKIVAPFFIELSE 72
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 359 KKVLVEFYAPWCGHCKQLVPIYDKLGE 439
K V+V+F++P CG CK L P K+ E
Sbjct: 114 KLVVVDFFSPSCGGCKALHPKICKIAE 140
>At4g21120.1 68417.m03054 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 594
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 15 YLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGMKK 131
YL+ LK + DRIMT ++D+DE + MKK
Sbjct: 34 YLKALKETPSRFMDRIMTRSLDSDEINEMKARSGHEMKK 72
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 368 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTR 511
LV YAPWC C+ + Y +L E V +AK A + E +
Sbjct: 366 LVVLYAPWCPFCQAMEASYIELAEKLAG-KGVKVAKFRADGEQKEFAK 412
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +2
Query: 368 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTR 511
+V YAPWC C+ + +D+L + V +AK A ++ + +
Sbjct: 370 IVVLYAPWCPFCQAMEASFDELADKL-GGSGVKVAKFRADGDQKDFAK 416
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 353 TTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
+ K ++++F A WCG CK + P ++ + + + A++D
Sbjct: 42 SNKLLVIDFTAVWCGPCKAMEPRVREIASKY---SEAVFARVD 81
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +2
Query: 365 VLVEFYAPWCGHCKQLVPIYDKLG----EHFE--NDDDVIIAKIDAT 487
++V FYAPWC +L P + K E + DD V++ +D T
Sbjct: 162 LVVNFYAPWCYWSNRLKPSWVKASQITRERYNPGTDDRVLLGSVDCT 208
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 359 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKID 481
K V+V+F++P CG CK L P K+ + E + DV +++
Sbjct: 118 KLVVVDFFSPGCGGCKALHP---KICQFAEMNPDVQFLQVN 155
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 377 FYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTRSR 517
F A WCG C+ + P+ +L + + DV K+D + +T S+
Sbjct: 113 FTAAWCGPCRFISPVIVELSKQY---PDVTTYKVDIDEGGISNTISK 156
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = +2
Query: 272 SEDLPADWAAKPVKVLVAANFDEVVFDTT--KKVLVEFYAPWCGHCK----QLVPIYDKL 433
++DL + ++ LV + ++V D+ KK+ + F A WCG C+ QLV +Y++L
Sbjct: 13 AQDLHSLLSSPARDFLVRNDGEQVKVDSLLGKKIGLYFSAAWCGPCQRFTPQLVEVYNEL 72
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 272 SEDLPADWAAKPVKVLVAANFD-EVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 448
S DL + AA+ ++ L++ + + + + K + + F A WC CK P KL E+ +
Sbjct: 14 SGDLYSILAAEGIEFLLSHSGEVPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQ 73
Query: 449 N 451
N
Sbjct: 74 N 74
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 272 SEDLPADWAAKPVKVLVAANFD-EVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 448
S DL + AA+ ++ L++ + + + + K + + F A WC CK P KL E+ +
Sbjct: 14 SGDLYSILAAEGIEFLLSHSGEVPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQ 73
Query: 449 N 451
N
Sbjct: 74 N 74
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains Pfam
PF00628: PHD-finger domain; contains TIGRFAMS TIGR01053:
zinc finger domain, LSD1 subclass; contains Pfam PF00271:
Helicase conserved C-terminal domain; similar to WSSV086
(GI:19481678)[shrimp white spot syndrome virus]; similar
to nuclear protein Np95 (GI:17939938) [Mus musculus]
Length = 1299
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 242 ERLNEFLNSVRRQLITAGLVFGHVLFKGDQTGRWN 138
E + EFL R L+ G+V VL G GR++
Sbjct: 988 ETVKEFLTKARAALVAVGIVRDSVLANGKDVGRFS 1022
>At5g18740.1 68418.m02224 expressed protein predicted proteins -
Arabidopsis thaliana; expression supported by MPSS
Length = 609
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 547 DNQVHDYNGERTLAGLTKFVETDGEGAEPVPSVTEFE 657
D+ D NG R T++ + EG+EP+ ++ + E
Sbjct: 534 DDDDDDENGNRLFRACTEYTYNEAEGSEPIFTIPKSE 570
>At3g49800.1 68416.m05445 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 428
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -3
Query: 379 EFDEDLLSCVEDDFVKVGG 323
E DEDL++ + +DFV++GG
Sbjct: 99 EGDEDLIAGIRNDFVEIGG 117
>At3g30300.1 68416.m03826 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 677
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = -2
Query: 254 GAVEERLNEFLNSVRRQ------LITAGLVFGHVLFKGDQTG 147
GAV ERL E+ N+ + + L ++GL FGH G+ G
Sbjct: 608 GAVSERLKEYKNAEKEEDLDEEDLSSSGLFFGHKESGGNNNG 649
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 359 KKVLVEFYAPWCGHCKQLVPIYDKLGEHF 445
K ++V F A WC K ++PIY +L +
Sbjct: 63 KILVVNFKASWCLPSKTILPIYQELASTY 91
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,517,263
Number of Sequences: 28952
Number of extensions: 293932
Number of successful extensions: 999
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2058178400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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