Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30411
(576 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 184 6e-49
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 111 4e-27
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 111 4e-27
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 0.81
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 23 1.4
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 2.5
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 23 2.5
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 21 9.9
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 184 bits (447), Expect = 6e-49
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 3 FLYWIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWREKCSVEGNPACWVPHSC 182
FLYW+DEIL +HNDVYFVTMTQVIQW+QNPRT+TE+KNFEPWREKC VEGNP CWVPHSC
Sbjct: 439 FLYWVDEILANHNDVYFVTMTQVIQWIQNPRTITESKNFEPWREKCVVEGNPHCWVPHSC 498
Query: 183 KLTSKEVPGETINLQTCLRCPVNYP 257
KLTSKEVPGETINLQTC+RCP NYP
Sbjct: 499 KLTSKEVPGETINLQTCVRCPNNYP 523
Score = 32.3 bits (70), Expect = 0.003
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 242 PSQLPWLNDPTGDGHY 289
P+ PW+NDPTGDG +
Sbjct: 519 PNNYPWVNDPTGDGFF 534
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 111 bits (267), Expect = 4e-27
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 12 WIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWREKCSVEGNPACWVPHSCKLT 191
+I+E+LQ NDVYFVT QVIQW+QNP + ++F+ W+EKC ++G P C +P+SC LT
Sbjct: 434 FIEEMLQ-RNDVYFVTNLQVIQWMQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALT 492
Query: 192 SKEVPGETINLQTCLRCPVNYP 257
++E+PGET+ L TC+ CP NYP
Sbjct: 493 TRELPGETLRLFTCMECPNNYP 514
Score = 29.9 bits (64), Expect = 0.016
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 236 EMPSQLPWLNDPTGDG 283
E P+ PW+ DPTGDG
Sbjct: 508 ECPNNYPWILDPTGDG 523
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 111 bits (267), Expect = 4e-27
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 12 WIDEILQSHNDVYFVTMTQVIQWVQNPRTVTEAKNFEPWREKCSVEGNPACWVPHSCKLT 191
+I+E+LQ NDVYFVT QVIQW+QNP + ++F+ W+EKC ++G P C +P+SC LT
Sbjct: 441 FIEEMLQ-RNDVYFVTNLQVIQWMQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALT 499
Query: 192 SKEVPGETINLQTCLRCPVNYP 257
++E+PGET+ L TC+ CP NYP
Sbjct: 500 TRELPGETLRLFTCMECPNNYP 521
Score = 28.3 bits (60), Expect = 0.050
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 236 EMPSQLPWLNDPTGDG 283
E P+ PW+ +PTGDG
Sbjct: 515 ECPNNYPWILEPTGDG 530
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 24.2 bits (50), Expect = 0.81
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 106 KPRTSSRGEKSAPSKETLHAGYLIPASS 189
KP+ +PSK + AGY +PA S
Sbjct: 2475 KPKNLLLSAAVSPSKAVMDAGYDVPALS 2502
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 106 KPRTSSRGEKSAPSKETLHAGYLIP 180
KP+ +PSK + AGY +P
Sbjct: 1552 KPKGYLLSAAVSPSKTVIDAGYDVP 1576
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 23.4 bits (48), Expect = 1.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 511 CFILYVIFYCKSV 549
C+I+YV YCK +
Sbjct: 58 CWIIYVRIYCKEI 70
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 439 HNPARSLSTYPIVCNIGSHEYLIVCFILYVIF 534
HN +++ + P++ I S I C + + IF
Sbjct: 231 HNEIQTIFSVPLLMKIASQFVGIFCSLYFCIF 262
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 439 HNPARSLSTYPIVCNIGSHEYLIVCFILYVIF 534
HN +++ + P++ I S I C + + IF
Sbjct: 56 HNEIQTIFSVPLLMKIASQFVGIFCSLYFCIF 87
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -2
Query: 305 RSWLLNSGHRPWGRL 261
R W HRPW +L
Sbjct: 526 RPWQTVYNHRPWQQL 540
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,109
Number of Sequences: 336
Number of extensions: 2842
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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