Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30410
         (460 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114493-1|AAI14494.1| 1514|Homo sapiens MAPKBP1 protein protein.      31   1.9  
U12535-1|AAA62280.1|  822|Homo sapiens epidermal growth factor r...    29   5.8  
AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein.       29   5.8  
BC030010-1|AAH30010.1|  822|Homo sapiens epidermal growth factor...    29   7.7  

>BC114493-1|AAI14494.1| 1514|Homo sapiens MAPKBP1 protein protein.
          Length = 1514

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +3

Query: 15   LSSANPGVVTSGDTVTLD----TPPAISRPNRPNSLQVPLSLTPAQIHNNKVLGNS 170
            L + +PG + S +    D     PPA  RP+RP+S Q P + + A+I  +  +G +
Sbjct: 1212 LQAPSPGALLSREIEAQDGLGSLPPADGRPSRPHSYQNPTTSSMAKISRSISVGEN 1267


>U12535-1|AAA62280.1|  822|Homo sapiens epidermal growth factor
           receptor kinase substrate protein.
          Length = 822

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 66  DTPPAISRPNRPNSLQVPL-SLTPAQIHNNKVLGN 167
           DTPPA S P  P  + VPL   TPA +  +KV  N
Sbjct: 619 DTPPAPSPPPTPAPVPVPLPPSTPAPVPVSKVPAN 653


>AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein.
          Length = 2849

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 54  TVTLDTPPAISRPNRPNSLQVPL 122
           TVT++TP  ++RP + +S +VPL
Sbjct: 212 TVTMETPTKVARPTQTSSQRVPL 234


>BC030010-1|AAH30010.1|  822|Homo sapiens epidermal growth factor
           receptor pathway substrate 8 protein.
          Length = 822

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 66  DTPPAISRPNRPNSLQVPL-SLTPAQIHNNKVLGN 167
           DTPPA S P  P  + VPL   TPA +  +KV  N
Sbjct: 619 DTPPAPSPPPTPVPVPVPLPPSTPAPVPVSKVPAN 653


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,520,862
Number of Sequences: 237096
Number of extensions: 1585536
Number of successful extensions: 8617
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8547
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)