Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30407
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.5  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   7.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.8  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   7.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = +3

Query: 48  NFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF 227
           +F P  S+  + +  +  D + K+ V N G N        +  ++    N W+ RN    
Sbjct: 463 DFQPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDM 522

Query: 228 AFVEFE 245
            F+E +
Sbjct: 523 -FIELD 527


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -1

Query: 220 GGFRATHTLRMLPYLENIFSISYLD--ALVPKLPTYTLQ 110
           G F+A + L  L  L N+ S  Y D  AL P L    L+
Sbjct: 206 GAFKAENLLVTLTVLPNVNSTVYYDPRALSPNLEFVVLE 244


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 267 LFVDLMEHAAVAPGFV--SKCQMVAQGETAGHFFNK 368
           +FV L+EH      +V  SKC+  + G    HFF K
Sbjct: 152 IFVALLEHCFSMLNYVYSSKCENNSTG--VEHFFKK 185


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 372 PTHQRPHHIS 401
           PT+Q+P HIS
Sbjct: 14  PTYQQPQHIS 23


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 372 PTHQRPHHIS 401
           PT+Q+P HIS
Sbjct: 14  PTYQQPQHIS 23


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 282 SSPRTESSAYGGLRIL 235
           + PRTES+ Y  +RI+
Sbjct: 185 AGPRTESAVYEPVRIM 200


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 424 WLTSRSCEEM 395
           W+TS +CEE+
Sbjct: 343 WITSETCEEV 352


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 424 WLTSRSCEEM 395
           W+TS +CEE+
Sbjct: 343 WITSETCEEI 352


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 372 PTHQRPHHIS 401
           PT+Q+P HIS
Sbjct: 14  PTYQQPQHIS 23


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 372 PTHQRPHHIS 401
           PT+Q+P HIS
Sbjct: 14  PTYQQPQHIS 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,169
Number of Sequences: 336
Number of extensions: 3873
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)