Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30407
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 90 7e-18
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 90 7e-18
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 90 7e-18
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 90 7e-18
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 90 7e-18
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 90 7e-18
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 90 7e-18
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 90 7e-18
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 90 7e-18
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 90 7e-18
Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor, arginine... 88 3e-17
L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor ... 88 3e-17
BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor, argini... 88 3e-17
BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor, argini... 88 3e-17
BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor, argini... 88 3e-17
AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing facto... 88 3e-17
AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens ... 87 6e-17
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 54 4e-07
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 54 4e-07
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 54 4e-07
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 54 4e-07
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 54 4e-07
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 54 4e-07
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 54 4e-07
U30884-1|AAA93074.1| 107|Homo sapiens SRp40-2 protein. 50 9e-06
U30827-1|AAB60405.1| 107|Homo sapiens SRp40-3 protein. 50 9e-06
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 50 9e-06
CR542182-1|CAG46979.1| 107|Homo sapiens SFRS5 protein. 50 9e-06
CR542167-1|CAG46964.1| 107|Homo sapiens SFRS5 protein. 50 9e-06
BX640605-1|CAE45711.1| 107|Homo sapiens hypothetical protein pr... 50 9e-06
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 50 9e-06
BC095420-1|AAH95420.1| 107|Homo sapiens SFRS5 protein protein. 50 9e-06
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 50 9e-06
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 50 9e-06
AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant pr... 50 9e-06
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 48 3e-05
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 48 3e-05
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 48 3e-05
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 48 3e-05
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 48 3e-05
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 41 0.005
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 41 0.005
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 41 0.005
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 41 0.005
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 41 0.005
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 41 0.005
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 41 0.005
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 41 0.005
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 40 0.007
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 40 0.009
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 40 0.009
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 40 0.009
U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein. 40 0.009
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 40 0.009
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 40 0.009
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 40 0.009
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 40 0.009
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 40 0.009
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 40 0.009
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 40 0.009
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 40 0.009
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 40 0.009
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 40 0.009
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 40 0.009
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 40 0.009
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 40 0.009
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 40 0.012
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 40 0.012
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 40 0.012
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 40 0.012
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 40 0.012
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 40 0.012
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 40 0.012
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 39 0.016
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 39 0.016
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 39 0.016
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 39 0.016
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 39 0.016
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 39 0.016
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 39 0.016
L38696-1|AAC28898.1| 291|Homo sapiens autoantigen p542 protein. 39 0.021
BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein, au... 39 0.021
BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein, au... 39 0.021
BC002696-1|AAH02696.1| 207|Homo sapiens HNRPCL1 protein protein. 39 0.021
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 39 0.021
AL031668-6|CAB43742.1| 290|Homo sapiens RNA binding protein, au... 39 0.021
AL031668-5|CAI22150.1| 306|Homo sapiens RNA binding protein, au... 39 0.021
AL031668-4|CAI22149.1| 237|Homo sapiens RNA binding protein, au... 39 0.021
AL031668-2|CAI22147.1| 181|Homo sapiens RNA binding protein, au... 39 0.021
AL031668-1|CAI22146.1| 89|Homo sapiens RNA binding protein, au... 39 0.021
AL022101-6|CAA17879.1| 293|Homo sapiens heterogeneous nuclear r... 39 0.021
AK222915-1|BAD96635.1| 307|Homo sapiens RNA binding protein (au... 39 0.021
AF148457-1|AAF04487.1| 306|Homo sapiens heterogeneous nuclear r... 39 0.021
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 38 0.028
M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2 ... 38 0.028
M16342-1|AAA52680.1| 290|Homo sapiens SNRPC protein. 38 0.028
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 38 0.028
BC108658-1|AAI08659.1| 293|Homo sapiens heterogeneous nuclear r... 38 0.028
BC103758-1|AAI03759.1| 293|Homo sapiens heterogeneous nuclear r... 38 0.028
BC089438-1|AAH89438.1| 250|Homo sapiens HNRPC protein protein. 38 0.028
BC066932-1|AAH66932.1| 293|Homo sapiens heterogeneous nuclear r... 38 0.028
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 38 0.028
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 38 0.028
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 38 0.028
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 38 0.028
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 38 0.028
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 38 0.028
BC008423-1|AAH08423.1| 306|Homo sapiens heterogeneous nuclear r... 38 0.028
BC008364-1|AAH08364.1| 293|Homo sapiens heterogeneous nuclear r... 38 0.028
BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear r... 38 0.028
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 38 0.028
BC003394-1|AAH03394.1| 293|Homo sapiens heterogeneous nuclear r... 38 0.028
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 38 0.028
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 38 0.028
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 38 0.028
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 38 0.028
AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear r... 38 0.028
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 38 0.037
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 38 0.037
BC031090-1|AAH31090.1| 291|Homo sapiens RALYL protein protein. 38 0.037
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 38 0.037
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 38 0.037
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 38 0.037
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 38 0.037
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 38 0.037
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 38 0.037
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 38 0.037
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 38 0.037
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 38 0.037
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 38 0.037
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 38 0.037
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 38 0.037
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 38 0.037
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 38 0.037
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 38 0.037
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 38 0.037
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 38 0.037
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 38 0.037
AF495530-1|AAO85517.1| 291|Homo sapiens RALY-like protein isofo... 38 0.037
AF495529-1|AAO85516.1| 291|Homo sapiens RALY-like protein isofo... 38 0.037
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 38 0.037
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 38 0.037
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 38 0.037
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 38 0.037
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 38 0.037
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 38 0.037
AF020307-1|AAC39543.1| 189|Homo sapiens HRS protein. 38 0.037
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 38 0.037
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 38 0.049
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 38 0.049
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 38 0.049
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 38 0.049
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 38 0.049
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 38 0.049
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 38 0.049
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 38 0.049
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 38 0.049
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 38 0.049
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 38 0.049
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 38 0.049
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 38 0.049
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 38 0.049
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 38 0.049
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 38 0.049
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 38 0.049
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 38 0.049
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 37 0.065
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 37 0.065
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 37 0.065
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 37 0.065
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 37 0.065
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 37 0.065
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 37 0.065
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 37 0.065
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 37 0.065
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 37 0.065
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 37 0.065
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 37 0.065
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 37 0.065
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 36 0.11
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 36 0.11
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 36 0.11
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 36 0.11
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 36 0.11
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 36 0.15
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 36 0.15
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 36 0.15
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 36 0.15
BX537372-1|CAD97614.1| 119|Homo sapiens hypothetical protein pr... 36 0.15
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 36 0.15
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 36 0.15
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 36 0.15
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 36 0.15
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 36 0.15
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 36 0.15
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 36 0.15
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 36 0.15
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 36 0.15
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 36 0.15
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 36 0.15
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 36 0.20
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 35 0.26
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 35 0.26
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 35 0.26
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 35 0.26
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 35 0.26
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 35 0.26
AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens ... 35 0.26
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 35 0.26
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 35 0.26
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 35 0.35
BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein. 35 0.35
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 35 0.35
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 35 0.35
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 35 0.35
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 35 0.35
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 35 0.35
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 35 0.35
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 35 0.35
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 35 0.35
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 35 0.35
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 35 0.35
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 35 0.35
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 35 0.35
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 35 0.35
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 34 0.46
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 34 0.46
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 34 0.46
EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2 ... 34 0.46
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 34 0.46
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 34 0.46
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 34 0.46
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 34 0.46
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 34 0.46
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 34 0.46
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 34 0.46
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 34 0.46
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 34 0.60
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 34 0.60
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 34 0.60
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 34 0.60
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 34 0.60
BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein. 34 0.60
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 34 0.60
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 34 0.60
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.60
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 34 0.60
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.60
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 34 0.60
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 34 0.60
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.60
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 34 0.60
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 34 0.60
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 34 0.60
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 34 0.60
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 34 0.60
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 34 0.60
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 34 0.60
AK130003-1|BAC85272.1| 307|Homo sapiens protein ( Homo sapiens ... 34 0.60
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 34 0.60
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 34 0.60
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 34 0.60
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 33 0.80
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 33 0.80
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 33 0.80
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 33 0.80
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 33 0.80
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 33 0.80
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 33 0.80
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 33 0.80
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 33 0.80
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 33 0.80
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 33 0.80
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 33 0.80
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 33 0.80
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 33 0.80
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 33 0.80
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 33 0.80
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 33 1.1
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 33 1.1
BC033838-1|AAH33838.1| 368|Homo sapiens BRUNOL6 protein protein. 33 1.1
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 33 1.1
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 33 1.1
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 33 1.1
AK131098-1|BAC85148.1| 376|Homo sapiens FLJ00324 protein protein. 33 1.1
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 33 1.1
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 33 1.1
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 33 1.1
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 33 1.4
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 33 1.4
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 33 1.4
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 1.4
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 33 1.4
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 33 1.4
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 33 1.4
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 33 1.4
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 33 1.4
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 33 1.4
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 33 1.4
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 33 1.4
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 33 1.4
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 33 1.4
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 33 1.4
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 32 1.8
AF141345-1|AAG49448.1| 213|Homo sapiens LYST-interacting protei... 32 1.8
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 32 2.4
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 32 2.4
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 32 2.4
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 32 2.4
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 32 2.4
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 32 2.4
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 32 2.4
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 32 2.4
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 32 2.4
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 31 3.2
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 31 3.2
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 31 3.2
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 31 3.2
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 31 3.2
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 31 3.2
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 31 3.2
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 31 3.2
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 31 3.2
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 31 3.2
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 31 3.2
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 31 3.2
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 31 3.2
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 31 4.3
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 31 4.3
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 31 4.3
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 31 4.3
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 31 4.3
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 31 4.3
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 31 4.3
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 31 4.3
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 31 4.3
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 31 4.3
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 31 4.3
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 31 4.3
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 31 4.3
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 31 4.3
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 31 4.3
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 31 4.3
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 31 4.3
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 31 4.3
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 31 4.3
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 30 7.4
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 30 7.4
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 30 9.8
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 30 9.8
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 30 9.8
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 30 9.8
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 30 9.8
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 30 9.8
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 30 9.8
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 30 9.8
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 30 9.8
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 30 9.8
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 30 9.8
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 30 9.8
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 30 9.8
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 30 9.8
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 90.2 bits (214), Expect = 7e-18
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPPGFAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 88.2 bits (209), Expect = 3e-17
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 105 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVEFEDPR
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDRR 352
P A D+VR LDG CG R+RVE+SNG R R
Sbjct: 56 PRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNR 90
>L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 88.2 bits (209), Expect = 3e-17
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 105 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVEFEDPR
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDRR 352
P A D+VR LDG CG R+RVE+SNG R R
Sbjct: 56 PRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNR 90
>BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 88.2 bits (209), Expect = 3e-17
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 105 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVEFEDPR
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDRR 352
P A D+VR LDG CG R+RVE+SNG R R
Sbjct: 56 PRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNR 90
>BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 88.2 bits (209), Expect = 3e-17
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 105 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVEFEDPR
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDRR 352
P A D+VR LDG CG R+RVE+SNG R R
Sbjct: 56 PRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNR 90
>BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 88.2 bits (209), Expect = 3e-17
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 105 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVEFEDPR
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDRR 352
P A D+VR LDG CG R+RVE+SNG R R
Sbjct: 56 PRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNR 90
>AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 88.2 bits (209), Expect = 3e-17
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 105 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
L CKVYVGNLG N +K E+E+ F YG +R+VWVARNPPGFAFVEFEDPR
Sbjct: 8 LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 57
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDRR 352
P A D+VR LDG CG R+RVE+SNG R R
Sbjct: 56 PRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNR 90
>AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ34106 fis, clone FCBBF3008073, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 7. ).
Length = 137
Score = 87.0 bits (206), Expect = 6e-17
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
MSRY + KVYVGNLGT A K E+E+ FS YG +R VW+ARNPP FAFVEFEDPR
Sbjct: 1 MSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPRFAFVEFEDPR 58
Score = 47.2 bits (107), Expect = 6e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P AED+VRGLDG CG+R+RVE+S G RR R
Sbjct: 57 PRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSR 90
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFEDPR 254
C++YVGNL + +IE +F KYG IR++ + R P FAFVEFEDPR
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFEDPR 254
C++YVGNL + +IE +F KYG IR++ + R P FAFVEFEDPR
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFEDPR 254
C++YVGNL + +IE +F KYG IR++ + R P FAFVEFEDPR
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFEDPR 254
C++YVGNL + +IE +F KYG IR++ + R P FAFVEFEDPR
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFEDPR 254
C++YVGNL + +IE +F KYG IR++ + R P FAFVEFEDPR
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFEDPR 254
C++YVGNL + +IE +F KYG IR++ + R P FAFVEFEDPR
Sbjct: 48 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 97
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFEDPR 254
C++YVGNL + +IE +F KYG IR++ + R P FAFVEFEDPR
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPR 65
>U30884-1|AAA93074.1| 107|Homo sapiens SRp40-2 protein.
Length = 107
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>U30827-1|AAB60405.1| 107|Homo sapiens SRp40-3 protein.
Length = 107
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>CR542182-1|CAG46979.1| 107|Homo sapiens SFRS5 protein.
Length = 107
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>CR542167-1|CAG46964.1| 107|Homo sapiens SFRS5 protein.
Length = 107
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>BX640605-1|CAE45711.1| 107|Homo sapiens hypothetical protein
protein.
Length = 107
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>BC095420-1|AAH95420.1| 107|Homo sapiens SFRS5 protein protein.
Length = 107
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 48
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 47 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 80
>AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant
protein.
Length = 326
Score = 50.0 bits (114), Expect = 9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
C+V++G L A + ++E+ F YG IR++ + R GF FVEFEDPR
Sbjct: 7 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPR 51
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 50 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 83
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 48.0 bits (109), Expect = 3e-05
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVEFEDPR 254
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV FEDPR
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 48.0 bits (109), Expect = 3e-05
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVEFEDPR 254
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV FEDPR
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 48.0 bits (109), Expect = 3e-05
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVEFEDPR 254
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV FEDPR
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 48.0 bits (109), Expect = 3e-05
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVEFEDPR 254
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV FEDPR
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 48.0 bits (109), Expect = 3e-05
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVEFEDPR 254
++YVGNL T+ + ++E +F KYG IR + + +N G FAFV FEDPR
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPR 63
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 40.3 bits (90), Expect = 0.007
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
S KV+VG + ++ E+ + FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 190 SRKVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 243
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L N + +I++ FS YG + V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L N + +I++ FS YG + V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
>U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein.
Length = 135
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L N + +I++ FS YG + V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L N + +I++ FS YG + V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 257 AEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
A+D+V L+G CG R+ VE + G RRDR
Sbjct: 48 ADDAVYELNGKELCGERVIVEHARG-PRRDR 77
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L N + +I++ FS YG + V + G+ FVEFED R
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 46
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 257 AEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
A+D+V L+G CG R+ VE + G RRDR
Sbjct: 48 ADDAVYELNGKELCGERVIVEHARG-PRRDR 77
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 39.9 bits (89), Expect = 0.009
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDP 251
S K+++G L S + FSK+G IR V R+P GF FV F DP
Sbjct: 16 SSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 68
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 39.9 bits (89), Expect = 0.009
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L T ++ +E +F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KDAARDM 69
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L N + +I++ FS YG + V + G+ FVEFED R
Sbjct: 37 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSR 80
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 257 AEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
A+D+V L+G CG R+ VE + G RRDR
Sbjct: 82 ADDAVYELNGKELCGERVIVEHARG-PRRDR 111
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.012
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVEFEDP 251
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.012
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVEFEDP 251
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.012
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVEFEDP 251
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.012
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVEFEDP 251
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 39.5 bits (88), Expect = 0.012
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVEFEDP 251
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VEFE+P
Sbjct: 139 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 190
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 39.5 bits (88), Expect = 0.012
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVEFEDP 251
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VEFE+P
Sbjct: 85 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 136
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.012
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIR--NVWVARNPP----GFAFVEFEDP 251
KV++G L N +K I +IFS YG I+ ++ V R P G+A+VEFE+P
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENP 213
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 39.1 bits (87), Expect = 0.016
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ E
Sbjct: 46 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLE 89
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 39.1 bits (87), Expect = 0.016
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ E
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLE 125
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 39.1 bits (87), Expect = 0.016
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ E
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLE 125
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 39.1 bits (87), Expect = 0.016
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ E
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLE 125
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 39.1 bits (87), Expect = 0.016
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ E
Sbjct: 46 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLE 89
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 39.1 bits (87), Expect = 0.016
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ E
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLE 125
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 39.1 bits (87), Expect = 0.016
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL T+ ++ + +++F +YG V++ R+ GF F+ E
Sbjct: 82 CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRD-RGFGFIRLE 125
>L38696-1|AAC28898.1| 291|Homo sapiens autoantigen p542 protein.
Length = 291
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 307
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>BC002696-1|AAH02696.1| 207|Homo sapiens HNRPCL1 protein protein.
Length = 207
Score = 38.7 bits (86), Expect = 0.021
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
++ +V++GNL T K ++E IFSKYG I V + GFAFV+++
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHK---GFAFVQYD 58
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 38.7 bits (86), Expect = 0.021
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDP 251
K+++G L S + FSK+G IR V R+P GF FV F DP
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 72
>AL031668-6|CAB43742.1| 290|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 290
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>AL031668-5|CAI22150.1| 306|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>AL031668-4|CAI22149.1| 237|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 237
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>AL031668-2|CAI22147.1| 181|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 181
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>AL031668-1|CAI22146.1| 89|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 89
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>AL022101-6|CAA17879.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C-like 1 protein.
Length = 293
Score = 38.7 bits (86), Expect = 0.021
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
++ +V++GNL T K ++E IFSKYG I V + GFAFV+++
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHK---GFAFVQYD 58
>AK222915-1|BAD96635.1| 307|Homo sapiens RNA binding protein
(autoantigenic, hnRNP-associated with lethal yellow)
long i protein.
Length = 307
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>AF148457-1|AAF04487.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein, alternate transcript protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.021
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG + V + G+AFV++ + R
Sbjct: 19 INSRVFIGNLNTALVKKSDVETIFSKYGRVAGCSVHK---GYAFVQYSNER 66
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.028
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL + ++ E +++F+KYG V++ + GF F++ E
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 340
>M29063-1|AAA36576.1| 303|Homo sapiens protein ( Human hnRNP C2
protein mRNA. ).
Length = 303
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>M16342-1|AAA52680.1| 290|Homo sapiens SNRPC protein.
Length = 290
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 38.3 bits (85), Expect = 0.028
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3
Query: 39 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 203
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 103 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 162
Query: 204 --VARNPPGFAFVEFEDP 251
V GFAFVE+E P
Sbjct: 163 DSVTMKHKGFAFVEYEVP 180
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 227 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 275
>BC108658-1|AAI08659.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>BC103758-1|AAI03759.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>BC089438-1|AAH89438.1| 250|Homo sapiens HNRPC protein protein.
Length = 250
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>BC066932-1|AAH66932.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.028
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL + ++ E +++F+KYG V++ + GF F++ E
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 340
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 38.3 bits (85), Expect = 0.028
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL + ++ E +++F+KYG V++ + GF F++ E
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 340
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.028
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3
Query: 39 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 203
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 60 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 119
Query: 204 --VARNPPGFAFVEFEDP 251
V GFAFVE+E P
Sbjct: 120 DSVTMKHKGFAFVEYEVP 137
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 184 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 232
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.028
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3
Query: 39 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 203
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 60 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 119
Query: 204 --VARNPPGFAFVEFEDP 251
V GFAFVE+E P
Sbjct: 120 DSVTMKHKGFAFVEYEVP 137
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 184 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 232
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 66 SIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W--VARNPPGFA 230
+++ R R + C+VYVG++ + I + F+ +G I+++ W V GFA
Sbjct: 54 NLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFA 113
Query: 231 FVEFEDP 251
FVE+E P
Sbjct: 114 FVEYEVP 120
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 167 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 215
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 66 SIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W--VARNPPGFA 230
+++ R R + C+VYVG++ + I + F+ +G I+++ W V GFA
Sbjct: 97 NLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFA 156
Query: 231 FVEFEDP 251
FVE+E P
Sbjct: 157 FVEYEVP 163
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 210 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 258
>BC008423-1|AAH08423.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>BC008364-1|AAH08364.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>BC007052-1|AAH07052.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 306
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 38.3 bits (85), Expect = 0.028
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL + ++ E +++F+KYG V++ + GF F++ E
Sbjct: 224 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 267
>BC003394-1|AAH03394.1| 293|Homo sapiens heterogeneous nuclear
ribonucleoprotein C (C1/C2) protein.
Length = 293
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 61
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 38.3 bits (85), Expect = 0.028
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFE 245
C+++VGNL + ++ E +++F+KYG V++ + GF F++ E
Sbjct: 297 CRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKG-KGFGFIKLE 340
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 66 SIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W--VARNPPGFA 230
+++ R R + C+VYVG++ + I + F+ +G I+++ W V GFA
Sbjct: 97 NLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFA 156
Query: 231 FVEFEDP 251
FVE+E P
Sbjct: 157 FVEYEVP 163
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 210 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 258
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 38.3 bits (85), Expect = 0.028
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3
Query: 39 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 203
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 100 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 159
Query: 204 --VARNPPGFAFVEFEDP 251
V GFAFVE+E P
Sbjct: 160 DSVTMKHKGFAFVEYEVP 177
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 224 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 272
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 38.3 bits (85), Expect = 0.028
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3
Query: 39 IVNNFYPPFSIKTKMSRYREWDLS--CKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W 203
+ F P S M+ R+ L+ C+VYVG++ + I + F+ +G I+++ W
Sbjct: 103 VTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW 162
Query: 204 --VARNPPGFAFVEFEDP 251
V GFAFVE+E P
Sbjct: 163 DSVTMKHKGFAFVEYEVP 180
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 227 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 275
>AB209527-1|BAD92764.1| 313|Homo sapiens Heterogeneous nuclear
ribonucleoproteins C1/C2 variant protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.028
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K ++E IFSKYG I V + GFAFV++ + R
Sbjct: 21 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHK---GFAFVQYVNER 68
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.037
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFED 248
K++VG L + ++ +E++FSKYG I V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.037
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFED 248
K++VG L + ++ +E++FSKYG I V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>BC031090-1|AAH31090.1| 291|Homo sapiens RALYL protein protein.
Length = 291
Score = 37.9 bits (84), Expect = 0.037
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K +IE IFSKYG I V + G+AFV++ R
Sbjct: 19 INSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHK---GYAFVQYMSER 66
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.037
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFED 248
K++VG L + ++ +E++FSKYG I V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.037
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFED 248
K++VG L + ++ +E++FSKYG I V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 37.9 bits (84), Expect = 0.037
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFED 248
K++VG L + ++ +E++FSKYG I V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AF495530-1|AAO85517.1| 291|Homo sapiens RALY-like protein isoform
2 protein.
Length = 291
Score = 37.9 bits (84), Expect = 0.037
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K +IE IFSKYG I V + G+AFV++ R
Sbjct: 19 INSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHK---GYAFVQYMSER 66
>AF495529-1|AAO85516.1| 291|Homo sapiens RALY-like protein isoform
1 protein.
Length = 291
Score = 37.9 bits (84), Expect = 0.037
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 LSCKVYVGNLGTN-ASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
++ +V++GNL T K +IE IFSKYG I V + G+AFV++ R
Sbjct: 19 INSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHK---GYAFVQYMSER 66
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 37.9 bits (84), Expect = 0.037
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + ++V N+ + ++ + F +YG I +V+V R P GFA+V+FE
Sbjct: 1 MSRYLR-PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.037
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFED 248
K++VG L + ++ +E++FSKYG I V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>AF020307-1|AAC39543.1| 189|Homo sapiens HRS protein.
Length = 189
Score = 37.9 bits (84), Expect = 0.037
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFED 248
C+V++G L A + ++E+ F YG IR++ + R GF FV+ D
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVDPRD 46
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 PPYAEDSVRGLDGTRCCGTRIRVEMSNGRTRRDR 349
P A+D+V LDG C R+ +E + R+R R
Sbjct: 44 PRDADDAVYELDGKELCSERVTIEHARARSRGGR 77
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.037
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFED 248
K++VG L + ++ +E++FSKYG I V V ++ GF FV FE+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 56
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 37.5 bits (83), Expect = 0.049
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQGETA-GHFFNKPPTHQR 386
AV G + QM G H + P +R
Sbjct: 77 -GAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 37.5 bits (83), Expect = 0.049
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQGETA-GHFFNKPPTHQR 386
AV G + QM G H + P +R
Sbjct: 77 -GAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 37.5 bits (83), Expect = 0.049
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQGETA-GHFFNKPPTHQR 386
AV G + QM G H + P +R
Sbjct: 77 -GAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 37.5 bits (83), Expect = 0.049
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQGETA-GHFFNKPPTHQR 386
AV G + QM G H + P +R
Sbjct: 77 -GAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTLFVDL 281
+++VGNL + ++ E+ K+F KYG V++ ++ GF F+ E + + V+L
Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD-KGFGFIRLETRTLAEIAKVEL 129
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 37.5 bits (83), Expect = 0.049
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQGETA-GHFFNKPPTHQR 386
AV G + QM G H + P +R
Sbjct: 77 -GAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 37.5 bits (83), Expect = 0.049
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQGETA-GHFFNKPPTHQR 386
AV G + QM G H + P +R
Sbjct: 77 -GAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 37.5 bits (83), Expect = 0.049
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQGETA-GHFFNKPPTHQR 386
AV G + QM G H + P +R
Sbjct: 77 -GAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 37.1 bits (82), Expect = 0.065
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRMLK 263
E D + K+++G L ++ ++ +F K+G I V + ++ GFAF+ FE+P K
Sbjct: 3 EADHAGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAK 62
Query: 264 TLFVDLMEHAAVAPGFVSKCQMVAQGETAGHFFNKPPTHQRPHHISSQLR 413
D+ + G K + + +PP R S LR
Sbjct: 63 NAAKDM--NGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLR 110
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L A + ++E+ F YG I V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L A + ++E+ F YG I V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 37.1 bits (82), Expect = 0.065
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPR 254
V NL S + ++F KYG + +V++ R P GFAFV F D R
Sbjct: 18 VDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFEDPRMLKT 266
+YVGN+ A+ E+E F G++ V + + +P GFA++EF D ++T
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L A + ++E+ F YG I V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L A + ++E+ F YG I V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L A + ++E+ F YG I V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L A + ++E+ F YG I V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 37.1 bits (82), Expect = 0.065
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPR 254
V NL S + ++F KYG + +V++ R P GFAFV F D R
Sbjct: 8 VDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 56
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 37.1 bits (82), Expect = 0.065
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPR 254
V NL S + ++F KYG + +V++ R P GFAFV F D R
Sbjct: 18 VDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFEDPRMLKT 266
+YVGN+ A+ E+E F G++ V + + +P GFA++EF D ++T
Sbjct: 174 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 37.1 bits (82), Expect = 0.065
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPR 254
+VY+G L A + ++E+ F YG I V + G+ FVEF+D R
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLR 46
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 36.3 bits (80), Expect = 0.11
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +3
Query: 105 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNV---W--VARNPPGFAFVEFEDP 251
+ C+VYVG++ + I + F+ +G I+++ W V GFAFVE+E P
Sbjct: 109 IMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP 162
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFE 245
++YV ++ + S +I+ +F +G I++ +AR+P G+ F+E+E
Sbjct: 209 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE 257
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.11
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRMLK 263
E D K+++G L ++ ++ +F K+G I V + ++ GFAF+ FE+P K
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAK 62
Query: 264 TLFVDLMEHAAVAPGFVSKCQMVAQGETAGHFFNKPPTHQRPHHISSQLR 413
D+ + G K + + +PP R S LR
Sbjct: 63 NAAKDM--NGTSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLR 110
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 36.3 bits (80), Expect = 0.11
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVW-----VARNPPGFAFVEFEDP 251
S +++V NL +++ ++EK+FSKYG + + + + P GFAF+ F P
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 453
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP--------GFAFVEFEDPRMLKT 266
C +++ NL + ++ +++++FSK G +++ +++ GF FVE+ P +
Sbjct: 730 CTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789
Query: 267 LFVDLMEH 290
L H
Sbjct: 790 ALKQLQGH 797
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 36.3 bits (80), Expect = 0.11
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVW-----VARNPPGFAFVEFEDP 251
S +++V NL +++ ++EK+FSKYG + + + + P GFAF+ F P
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 453
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP--------GFAFVEFEDPRMLKT 266
C +++ NL + ++ +++++FSK G +++ +++ GF FVE+ P +
Sbjct: 730 CTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQK 789
Query: 267 LFVDLMEH 290
L H
Sbjct: 790 ALKQLQGH 797
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 36.3 bits (80), Expect = 0.11
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVW-----VARNPPGFAFVEFEDP 251
S +++V NL +++ ++EK+FSKYG + + + + P GFAF+ F P
Sbjct: 414 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFP 466
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +3
Query: 111 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP--------GFAFVEFEDPRMLKT 266
C +++ NL + ++ +++++FSK G +++ +++ GF FVE+ P +
Sbjct: 743 CTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQK 802
Query: 267 LFVDLMEH 290
L H
Sbjct: 803 ALKQLQGH 810
>X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric cap
binding complex CBC protein.
Length = 156
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVEF 242
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE+
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEY 88
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 35.9 bits (79), Expect = 0.15
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRMLK 263
E D K+++G L ++ ++ +F K+G I V + ++ GFAF+ FE+P K
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAK 62
Query: 264 TLFVDLMEHAAVAPGFVSKCQMVAQGETAGHFFNKPPTHQRPHHISSQLR 413
D+ + G K + + +PP R S LR
Sbjct: 63 NAAKDM--NGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLR 110
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 35.9 bits (79), Expect = 0.15
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRMLK 263
E D K+++G L ++ ++ +F K+G I V + ++ GFAF+ FE+P K
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAK 62
Query: 264 TLFVDLMEHAAVAPGFVSKCQMVAQGETAGHFFNKPPTHQRPHHISSQLR 413
D+ + G K + + +PP R S LR
Sbjct: 63 NAAKDM--NGKSLHGKAIKVEQAQKPSFQSGGRRRPPASSRNRSPSGSLR 110
>D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein 1
protein.
Length = 156
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVEF 242
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE+
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEY 88
>BX537372-1|CAD97614.1| 119|Homo sapiens hypothetical protein
protein.
Length = 119
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVEF 242
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE+
Sbjct: 58 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEY 107
>BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVEF 242
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE+
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEY 88
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 35.9 bits (79), Expect = 0.15
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
K++VG + + +Y + F KYG I + V + GFAFV F+D + + V
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186
Query: 279 ----LMEHAAVAPGFVSKCQMVAQGETAG 353
+ H +SK +M + G G
Sbjct: 187 KYHTINGHNCEVKKALSKQEMQSAGSQRG 215
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 35.9 bits (79), Expect = 0.15
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
K++VG + + +Y + F KYG I + V + GFAFV F+D + + V
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186
Query: 279 ----LMEHAAVAPGFVSKCQMVAQGETAG 353
+ H +SK +M + G G
Sbjct: 187 KYHTINGHNCEVKKALSKQEMQSAGSQRG 215
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 35.9 bits (79), Expect = 0.15
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRMLK 263
E D K+++G L ++ ++ +F K+G I V + ++ GFAF+ FE+P K
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAK 62
Query: 264 TLFVDLMEHAAVAPGFVSKCQMVAQGETAGHFFNKPPTHQRPHHISSQLR 413
D+ + G K + + +PP R S LR
Sbjct: 63 NAAKDM--NGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLR 110
>BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor
protein (35 kDa) protein.
Length = 261
Score = 35.9 bits (79), Expect = 0.15
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + +++ N+ ++ + F +YG I +V++ R P GFA+V+FE
Sbjct: 1 MSRYTR-PPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVEF 242
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE+
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEY 88
>AY644767-1|AAV85455.1| 156|Homo sapiens cell
proliferation-inducing gene 55 protein.
Length = 156
Score = 35.9 bits (79), Expect = 0.15
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA-----RNPPGFAFVEF 242
SC +YVGNL ++ +I ++FSK G+I+ + + + GF FVE+
Sbjct: 39 SCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEY 88
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 35.9 bits (79), Expect = 0.15
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
K++VG + + +Y + F KYG I + V + GFAFV F+D + + V
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186
Query: 279 ----LMEHAAVAPGFVSKCQMVAQGETAG 353
+ H +SK +M + G G
Sbjct: 187 KYHTINGHNCEVKKALSKQEMQSAGSQRG 215
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 35.9 bits (79), Expect = 0.15
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQG 341
AV G + QM G
Sbjct: 77 -GAVLDGRELRVQMARCG 93
>AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein.
Length = 261
Score = 35.9 bits (79), Expect = 0.15
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +3
Query: 81 MSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFE 245
MSRY + +++ N+ ++ + F +YG I +V++ R P GFA+V+FE
Sbjct: 1 MSRYTR-PPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 246 DPR 254
D R
Sbjct: 60 DVR 62
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 35.9 bits (79), Expect = 0.15
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
K++VG + + +Y + F KYG I + V + GFAFV F+D + + V
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186
Query: 279 ----LMEHAAVAPGFVSKCQMVAQGETAG 353
+ H +SK +M + G G
Sbjct: 187 KYHTINGHNCEVKKALSKQEMQSAGSQRG 215
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 35.5 bits (78), Expect = 0.20
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFED 248
++ S K++VG + N + E+ + F K+G + V + + P GF F+ FED
Sbjct: 108 DYSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 163
Score = 33.5 bits (73), Expect = 0.80
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRMLKTL 269
K++VG L + ++ + FS+YG + + + ++ GF FV+F+DP + T+
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
>BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein.
Length = 173
Score = 35.1 bits (77), Expect = 0.26
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 NIVNNFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 215
N +N + K+S + E+ S +++G L ++ +I +FS+YG I N+ + R+
Sbjct: 11 NELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRD 70
Query: 216 -----PPGFAFVEFEDPR 254
GF F+ +ED R
Sbjct: 71 KKTGKSKGFCFLCYEDQR 88
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 35.1 bits (77), Expect = 0.26
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVAR-----NPPGFAFVEFE 245
VYV L N + IE++F K GN+ + + +P GFAFVEFE
Sbjct: 127 VYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFE 174
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 35.1 bits (77), Expect = 0.26
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 NIVNNFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 215
N +N + K+S + E+ S +++G L ++ +I +FS+YG I N+ + R+
Sbjct: 11 NELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRD 70
Query: 216 -----PPGFAFVEFEDPR 254
GF F+ +ED R
Sbjct: 71 KKTGKSKGFCFLCYEDQR 88
>BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for
IMAGE:3686686) protein.
Length = 163
Score = 35.1 bits (77), Expect = 0.26
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 NIVNNFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 215
N +N + K+S + E+ S +++G L ++ +I +FS+YG I N+ + R+
Sbjct: 11 NELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRD 70
Query: 216 -----PPGFAFVEFEDPR 254
GF F+ +ED R
Sbjct: 71 KKTGKSKGFCFLCYEDQR 88
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 35.1 bits (77), Expect = 0.26
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 NIVNNFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 215
N +N + K+S + E+ S +++G L ++ +I +FS+YG I N+ + R+
Sbjct: 11 NELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRD 70
Query: 216 -----PPGFAFVEFEDPR 254
GF F+ +ED R
Sbjct: 71 KKTGKSKGFCFLCYEDQR 88
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 35.1 bits (77), Expect = 0.26
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 NIVNNFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 215
N +N + K+S + E+ S +++G L ++ +I +FS+YG I N+ + R+
Sbjct: 11 NELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRD 70
Query: 216 -----PPGFAFVEFEDPR 254
GF F+ +ED R
Sbjct: 71 KKTGKSKGFCFLCYEDQR 88
>AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens
cDNA FLJ36307 fis, clone THYMU2004906, moderately
similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 186
Score = 35.1 bits (77), Expect = 0.26
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQ--GETAGHFFNKPPTHQRPH 392
A PG + A+ G +PP+ PH
Sbjct: 77 GA--VPGLAADLATAARSLGPALVLDLGRPPSPD-PH 110
>AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein.
Length = 351
Score = 35.1 bits (77), Expect = 0.26
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 NIVNNFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN 215
N +N + K+S + E+ S +++G L ++ +I +FS+YG I N+ + R+
Sbjct: 11 NELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRD 70
Query: 216 -----PPGFAFVEFEDPR 254
GF F+ +ED R
Sbjct: 71 KKTGKSKGFCFLCYEDQR 88
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 35.1 bits (77), Expect = 0.26
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 96 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRML 260
E D K+++G L + +E F KYG I V + ++ GFAFV FE P
Sbjct: 3 EADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62
Query: 261 KTLFVDL 281
K D+
Sbjct: 63 KAAARDM 69
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 34.7 bits (76), Expect = 0.35
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFED 248
K+++GNL A++ EI +F +YG + + +N + FV ED
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIED 44
>BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein.
Length = 179
Score = 34.7 bits (76), Expect = 0.35
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KYG + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFV 314
A G V
Sbjct: 77 GADPGVGAV 85
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 34.7 bits (76), Expect = 0.35
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFED 248
K+++GNL A++ EI +F +YG + + +N + FV ED
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIED 44
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +3
Query: 60 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 227
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 80 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 137
Query: 228 AFVEFEDPRMLKTLFVDLMEHAAVAPG 308
AFV+F+ K ++ + + PG
Sbjct: 138 AFVKFQTHAEAKAA-INTLHSSRTLPG 163
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 34.7 bits (76), Expect = 0.35
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFED 248
K+++GNL A++ EI +F +YG + + +N + FV ED
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIED 44
>BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA binding
protein (Drosophila) protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 60 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 227
P +K S R D K++VG LG + ++ ++F +G+I V R+P G
Sbjct: 119 PIQVKPAASEGRGEDR--KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGC 176
Query: 228 AFVEF 242
AFV+F
Sbjct: 177 AFVKF 181
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 34.7 bits (76), Expect = 0.35
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFED 248
K+++GNL A++ EI +F +YG + + +N + FV ED
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIED 44
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFED 248
S K++VG + N + E+ + F K+G + V + + P GF F+ FED
Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 163
Score = 33.5 bits (73), Expect = 0.80
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRMLKTL 269
K++VG L + ++ + FS+YG + + + ++ GF FV+F+DP + T+
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.35
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFED 248
K+++GNL A++ EI +F +YG + + +N + FV ED
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIED 44
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.35
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFED 248
K+++GNL A++ EI +F +YG + + +N + FV ED
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIED 44
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 34.7 bits (76), Expect = 0.35
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFED 248
K+++GNL A++ EI +F +YG + + +N + FV ED
Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN---YGFVHIED 44
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGFAFVEFED 248
S K++VG + N + E+ + F K+G + V + + P GF F+ FED
Sbjct: 23 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFED 74
>AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CELF6
protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 60 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 227
P +K S R D K++VG LG + ++ ++F +G+I V R+P G
Sbjct: 119 PIQVKPAASEGRGEDR--KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGC 176
Query: 228 AFVEF 242
AFV+F
Sbjct: 177 AFVKF 181
>AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-binding
protein protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 60 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 227
P +K S R D K++VG LG + ++ ++F +G+I V R+P G
Sbjct: 119 PIQVKPAASEGRGEDR--KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGC 176
Query: 228 AFVEF 242
AFV+F
Sbjct: 177 AFVKF 181
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 34.7 bits (76), Expect = 0.35
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
K+++G L + +E F KYG I V + ++ GFAFV FE P K D
Sbjct: 3 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRD 62
Query: 279 L 281
+
Sbjct: 63 M 63
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 127
Query: 279 LMEH 290
EH
Sbjct: 128 QKEH 131
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 34.3 bits (75), Expect = 0.46
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +3
Query: 123 VGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVDLME 287
V NL S + ++F KY + +V++ R+ GFAFV F D R + +D M+
Sbjct: 18 VDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA-MDAMD 76
Query: 288 HAAVAPGFVSKCQMVAQGETA-GHFFNKPPTHQR 386
AV G + QM G H + P +R
Sbjct: 77 -GAVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 127
Query: 279 LMEH 290
EH
Sbjct: 128 QKEH 131
>EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2
protein.
Length = 260
Score = 34.3 bits (75), Expect = 0.46
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +3
Query: 156 EIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRMLKTL 269
E+ ++FS+YG++ +V++ + FAFV F D ++ ++L
Sbjct: 87 ELRELFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 124
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 279 LMEH 290
EH
Sbjct: 130 QKEH 133
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 279 LMEH 290
EH
Sbjct: 130 QKEH 133
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 279 LMEH 290
EH
Sbjct: 130 QKEH 133
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 279 LMEH 290
EH
Sbjct: 130 QKEH 133
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 279 LMEH 290
EH
Sbjct: 130 QKEH 133
>AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA
sequence from clone RP11-223F20 on chromosome 13
Contains a novel heterogeneous nuclear ribonucleoprotein
family A protein and).
Length = 276
Score = 34.3 bits (75), Expect = 0.46
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRMLKTLFVD 278
K++VG + + +Y + F K I + V + GFAFV F+D ++ + V
Sbjct: 24 KIFVGGIKEDTEEYNLRDYFEKCSKIETIEVMEDRQSGKKRGFAFVTFDDHDIIDKIVVQ 83
Query: 279 ----LMEHAAVAPGFVSKCQMVAQGETAGH 356
+ H +SK +M + G GH
Sbjct: 84 KYHTINGHNCEVKKALSKQEMQSAGSQRGH 113
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 279 LMEH 290
EH
Sbjct: 130 QKEH 133
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 34.3 bits (75), Expect = 0.46
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 114 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRMLKTLFVD 278
K++VG L + SK +++ F+K+G + + + +P GF F+ F+D ++ + +D
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV-LD 129
Query: 279 LMEH 290
EH
Sbjct: 130 QKEH 133
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 33.9 bits (74), Expect = 0.60
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
++V L + +++++FS+YG+IR + + R+ G+AF+E+++ R + + D
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRD 111
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 33.9 bits (74), Expect = 0.60
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
++V L + +++++FS+YG+IR + + R+ G+AF+E+++ R + + D
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRD 111
>U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein
protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.60
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFED 248
S ++++GNL K E++ F YGN+ + + P F FV F+D
Sbjct: 339 SHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDD 387
>CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.60
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFED 248
S ++++GNL K E++ F YGN+ + + P F FV F+D
Sbjct: 339 SHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDD 387
>BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.60
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 108 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPGFAFVEFED 248
S ++++GNL K E++ F YGN+ + + P F FV F+D
Sbjct: 339 SHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDD 387
>BC139836-1|AAI39837.1| 563|Homo sapiens RBM15B protein protein.
Length = 563
Score = 33.9 bits (74), Expect = 0.60
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG----FAFVEFED 248
+++GNL + S+ E+ + F KYG I V + R G +AF++F++
Sbjct: 12 LFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQN 59
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 33.9 bits (74), Expect = 0.60
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
++V L + +++++FS+YG+IR + + R+ G+AF+E+++ R + + D
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRD 116
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 33.9 bits (74), Expect = 0.60
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 60 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 227
P +K S R D K++VG LG + ++ K+F +G I V R P G
Sbjct: 80 PIQVKPADSESRGEDR--KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGC 137
Query: 228 AFVEFE 245
AFV+F+
Sbjct: 138 AFVKFQ 143
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 33.9 bits (74), Expect = 0.60
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
++V L + +++++FS+YG+IR + + R+ G+AF+E+++ R + + D
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRD 116
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 33.9 bits (74), Expect = 0.60
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
++V L + +++++FS+YG+IR + + R+ G+AF+E+++ R + + D
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRD 111
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 33.9 bits (74), Expect = 0.60
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRMLKTLFVD 278
++V L + +++++FS+YG+IR + + R+ G+AF+E+++ R + + D
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRD 116
>BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.60
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Frame = +3
Query: 60 PFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGF 227
P +K S R D K++VG L S+ ++ ++F +GNI + R P G
Sbjct: 127 PIQVKPADSESRGEDR--KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGC 184
Query: 228 AFVEFEDPRMLKTLFVDLMEHAAVAPGFVSKCQMVAQGETAGHFFNKPPTHQRPHHISSQ 407
AFV++ + ++ + + PG S +V +T +K T +R ++ Q
Sbjct: 185 AFVKYSSHAEAQAA-INALHGSQTMPG-ASSSLVVKFADT-----DKERTMRRMQQMAGQ 237
Query: 408 LRLVNQFDI 434
+ + N I
Sbjct: 238 MGMFNPMAI 246
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 33.9 bits (74), Expect = 0.60
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 117 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVA---RNPPGFAFVEFE 245
V++ NLG + IFS +GNI + VA + P G+ FV F+
Sbjct: 135 VFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQ 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,837,080
Number of Sequences: 237096
Number of extensions: 2286766
Number of successful extensions: 5588
Number of sequences better than 10.0: 371
Number of HSP's better than 10.0 without gapping: 5146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5500
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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