Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30405
         (764 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033066-1|AAH33066.1|  539|Homo sapiens F-box and leucine-rich ...    31   6.0  
AK223088-1|BAD96808.1|  533|Homo sapiens F-box and leucine-rich ...    31   6.0  
AK026541-1|BAB15499.1|  533|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AF174592-1|AAF04513.1|  283|Homo sapiens F-box protein Fbl6 prot...    31   6.0  

>BC033066-1|AAH33066.1|  539|Homo sapiens F-box and leucine-rich
           repeat protein 6 protein.
          Length = 539

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 25  AAKGTLRWPREQRQPTLYYTASLSSPLL 108
           AA+   RW     QP L++T +LSSPL+
Sbjct: 140 AARVCRRWQEAASQPALWHTVTLSSPLV 167


>AK223088-1|BAD96808.1|  533|Homo sapiens F-box and leucine-rich
           repeat protein 6 isoform 2 variant protein.
          Length = 533

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 25  AAKGTLRWPREQRQPTLYYTASLSSPLL 108
           AA+   RW     QP L++T +LSSPL+
Sbjct: 140 AARVCRRWQEAASQPALWHTVTLSSPLV 167


>AK026541-1|BAB15499.1|  533|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22888 fis, clone KAT03934. ).
          Length = 533

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 25  AAKGTLRWPREQRQPTLYYTASLSSPLL 108
           AA+   RW     QP L++T +LSSPL+
Sbjct: 140 AARVCRRWQEAASQPALWHTVTLSSPLV 167


>AF174592-1|AAF04513.1|  283|Homo sapiens F-box protein Fbl6
           protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 25  AAKGTLRWPREQRQPTLYYTASLSSPLL 108
           AA+   RW     QP L++T +LSSPL+
Sbjct: 51  AARVCRRWQEAASQPALWHTVTLSSPLV 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,559,026
Number of Sequences: 237096
Number of extensions: 1347348
Number of successful extensions: 3782
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3782
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)