Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30405
         (764 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-P...    33   0.57 
BT030114-1|ABN49253.1|  342|Drosophila melanogaster IP08073p pro...    29   9.2  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   9.2  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   9.2  

>AE013599-2734|AAF57660.2| 1271|Drosophila melanogaster CG30122-PB
           protein.
          Length = 1271

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = +3

Query: 69  YPVLHSFTQLTVTNKRKPDTQEEIPAKIPKTDVNDDCKTNSEE---LIVETTAKDATVEK 239
           Y V  S T+  + N  +P  +   P K    D +DD   N  E   ++ E TA D  VEK
Sbjct: 471 YLVNFSDTEQLLVNAERPTRKRRKPRKDEDKDKDDDKDDNDGEKWKVLDEATADDDEVEK 530

Query: 240 AAEEPKKWKLKNLLQYQQMTRQKQRE 317
             E+ K    K+  + +   + K+ E
Sbjct: 531 KDEDGKASSEKDEEEAEDPEKAKEDE 556



 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +3

Query: 72  PVLHSFTQLTVTNKRKPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAKDATVEKAAEE 251
           P    F + + T+ ++   +E +PA +P+ +V D+      +   E      T E   E+
Sbjct: 142 PEPEEFDEKSETDDKQETIEEAVPAVVPQNEVADEPMEEDHDAAPEEQEPTQTEEPVEEK 201

Query: 252 P 254
           P
Sbjct: 202 P 202


>BT030114-1|ABN49253.1|  342|Drosophila melanogaster IP08073p
           protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = +3

Query: 120 PDTQEEIPAKIPKTD--VNDDC--KTNSEELIVETTAKDATVEKAAEEPKKWKLKNLLQY 287
           P+++E I  KIP+TD  +N+D   K  S ++ +  T K   +E   + PK  K+  L++ 
Sbjct: 265 PESKEPILPKIPETDHLINEDLIRKPQSPKIHIPETPK--IIEPKIQIPKDPKMPKLIRP 322

Query: 288 QQM 296
           + +
Sbjct: 323 EDL 325


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +3

Query: 96   LTVTNKRKPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAKDATVE 236
            L V++ +  ++ +E+P+KIPK+         S  L+VE    +  +E
Sbjct: 7768 LNVSHAKTAESSKELPSKIPKSVKAQRKMKESRSLVVEAPNAEEAIE 7814


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
            isoform C protein.
          Length = 18074

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +3

Query: 96   LTVTNKRKPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAKDATVE 236
            L V++ +  ++ +E+P+KIPK+         S  L+VE    +  +E
Sbjct: 7768 LNVSHAKTAESSKELPSKIPKSVKAQRKMKESRSLVVEAPNAEEAIE 7814


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,800,315
Number of Sequences: 53049
Number of extensions: 413637
Number of successful extensions: 1734
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)