Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30405
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr...    32   0.39 
U41015-6|AAA82314.1|  145|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AC024200-14|AAF36005.1|  557|Caenorhabditis elegans Hypothetical...    30   2.1  
CU457744-3|CAM36369.1|  247|Caenorhabditis elegans Hypothetical ...    29   3.6  
U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AC006692-8|AAF39973.1|  431|Caenorhabditis elegans Hypothetical ...    29   4.8  
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AL031630-21|CAA20997.2|  736|Caenorhabditis elegans Hypothetical...    28   6.3  
U80442-3|AAB37665.1|  333|Caenorhabditis elegans Hypothetical pr...    28   8.4  
AL117204-6|CAB55149.2|  833|Caenorhabditis elegans Hypothetical ...    28   8.4  
AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...    28   8.4  
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...    28   8.4  

>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
            C38D4.3 protein.
          Length = 1784

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 150  IPKTDVNDDCKTNSEELIVETTAKDATVEKAAEEPKK 260
            +P  DV DD ++ SEE+  E   +   V++ A+EP+K
Sbjct: 1250 VPTIDVADDLESKSEEVNEEEVVESEEVQQDAKEPEK 1286


>U41015-6|AAA82314.1|  145|Caenorhabditis elegans Hypothetical
           protein F20B6.6 protein.
          Length = 145

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +3

Query: 108 NKRKPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAKDATVEKAAEEPKKWKLKNLLQY 287
           N  KP    E  AK+ K D +DD    SE+  +E   K    E+ AE  KKW    ++  
Sbjct: 14  NNGKPKPSHEKDAKVKKNDDDDD--LGSEKKDLEPKEK----EQRAEMIKKWASAVMMST 67

Query: 288 -QQMTRQ 305
            QQ+T++
Sbjct: 68  PQQLTKE 74


>AC024200-14|AAF36005.1|  557|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.4 protein.
          Length = 557

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +3

Query: 108 NKRKPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAKDATVEKAAEEPKKWKLKNLLQY 287
           N  KP    E  AK+ K D +DD    SE+  +E   K    E+ AE  KKW    ++  
Sbjct: 118 NNGKPKPSHEKDAKVKKNDDDDD--LGSEKKDLEPKEK----EQRAEMIKKWASAVMMST 171

Query: 288 -QQMTRQ 305
            QQ+T++
Sbjct: 172 PQQLTKE 178


>CU457744-3|CAM36369.1|  247|Caenorhabditis elegans Hypothetical
           protein T06A10.4 protein.
          Length = 247

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 165 VNDDCKTNSEELIVETTAKDATVEKAAEEPKKWKLKNLLQYQQMTRQKQ 311
           +N +    +++ IVE    D   +K  E  KK K++    Y++MT +++
Sbjct: 17  INREVPEKAKKAIVEIERLDILAKKEMEVAKKHKIEFFANYEEMTAEQK 65


>U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical
           protein ZC239.6 protein.
          Length = 258

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 114 RKPDTQEEIP-AKIPKTDVNDDCKTNSEELIVETTAKDATVEKAAEEPKKWKLKNLLQYQ 290
           + P+ + ++  A +P+ D N +   NSE++++E       +EK    PK  K++N   Y 
Sbjct: 132 KPPNKENDLSIASVPEYDANQNIVKNSEKMMLE-------IEKIPSPPKDAKIENYDDYL 184

Query: 291 QM 296
           ++
Sbjct: 185 KL 186


>AC006692-8|AAF39973.1|  431|Caenorhabditis elegans Hypothetical
           protein T28F12.1 protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 117 KPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAKDATVEKAAEEPKKWKLK 272
           +P T +   +    TD +   KT  +E+ VET  KD  + KA+ + KK  +K
Sbjct: 335 EPSTMQGSDSGGDPTDKSIADKTPKKEVKVETPKKDGNMAKASPKVKKTPVK 386


>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
           protein H03E18.1 protein.
          Length = 1147

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 111 KRKPDTQEEIPAKIPKTDV 167
           K+KPDT++E P K PK ++
Sbjct: 343 KKKPDTKKETPTKKPKVEL 361


>AL031630-21|CAA20997.2|  736|Caenorhabditis elegans Hypothetical
           protein Y38H6C.20 protein.
          Length = 736

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 618 PQ*HQLLQLSLVYHLNLFDFSNSCRCS 538
           PQ  +LL + L+  + LFD S +C CS
Sbjct: 5   PQFSKLLVICLLILITLFDLSEACSCS 31


>U80442-3|AAB37665.1|  333|Caenorhabditis elegans Hypothetical
           protein T20F5.4 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/48 (22%), Positives = 25/48 (52%)
 Frame = +3

Query: 84  SFTQLTVTNKRKPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAKDA 227
           +FT L  ++KR    +  +P+ + +  +ND+ KT  +  ++    + A
Sbjct: 195 AFTVLNQSSKRHSSIEPSLPSTLSQLSLNDEAKTPQKAEVIRWNKQKA 242


>AL117204-6|CAB55149.2|  833|Caenorhabditis elegans Hypothetical
           protein Y116A8C.13 protein.
          Length = 833

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 147 KIPKTDVNDDCKTNSEELIVETTAKDATVEKAAEEPKKWK 266
           KI K D +DD + + EEL  + T  D  VE + E P+  K
Sbjct: 737 KIDKIDSDDDEEADDEELEADVT--DEVVEDSQEPPEATK 774


>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 102 VTNKRKPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAK 221
           +TN  +  T EE+   I + D++ D + N EE +   T K
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 102 VTNKRKPDTQEEIPAKIPKTDVNDDCKTNSEELIVETTAK 221
           +TN  +  T EE+   I + D++ D + N EE +   T K
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,865,381
Number of Sequences: 27780
Number of extensions: 218795
Number of successful extensions: 828
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)