Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30404
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein. 35 0.34
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein. 33 1.0
BC113617-1|AAI13618.1| 757|Homo sapiens relaxin/insulin-like fa... 31 3.2
BC112142-1|AAI12143.1| 757|Homo sapiens leucine-rich repeat-con... 31 3.2
AY899850-1|AAX85198.1| 724|Homo sapiens LGR7.10 protein. 31 3.2
AY899849-1|AAX85197.1| 709|Homo sapiens LGR7.2 protein. 31 3.2
AF190500-1|AAG17167.1| 757|Homo sapiens leucine-rich repeat-con... 31 3.2
AC108017-1|AAY41039.1| 260|Homo sapiens unknown protein. 31 3.2
BX537746-1|CAD97823.1| 1624|Homo sapiens hypothetical protein pr... 30 7.3
BC063594-1|AAH63594.1| 632|Homo sapiens ZNF292 protein protein. 30 7.3
AY684300-1|AAV86070.1| 618|Homo sapiens zinc finger protein 292... 30 7.3
AL139274-3|CAH73308.1| 2578|Homo sapiens protein ( Human DNA seq... 30 7.3
AK131497-1|BAD18641.1| 930|Homo sapiens protein ( Homo sapiens ... 30 7.3
AK023712-1|BAB14654.1| 627|Homo sapiens protein ( Homo sapiens ... 30 7.3
AB011102-1|BAA25456.1| 1563|Homo sapiens KIAA0530 protein protein. 30 7.3
>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
Length = 6885
Score = 34.7 bits (76), Expect = 0.34
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 285 LTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINSLKNFGNRYAIYKPSL 431
+TDLN + +NF K F++++ + ++V EK+ L+ NR ++ +L
Sbjct: 2258 VTDLNTTLDNFSKEFVSFSDKPVDQIVVEEKLQKLQELENRLSLQDGTL 2306
>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
Length = 6884
Score = 33.1 bits (72), Expect = 1.0
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 285 LTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINSLKNFGNRYAIYKPSL 431
+TDLN + +NF K F++++ + + V EK+ L+ NR ++ +L
Sbjct: 2257 VTDLNTTLDNFSKEFVSFSDKPVDQIAVEEKLQKLQELENRLSLQDGTL 2305
>BC113617-1|AAI13618.1| 757|Homo sapiens relaxin/insulin-like
family peptide receptor 1 protein.
Length = 757
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 312 NFKKYFMNYNLIDMLNVIVYEKINSLKNF---GNRYAIYKPSLLEEFRTLNWLL 464
+ +K ++ N I +++ + +NSL NR KP + E+ L WL+
Sbjct: 151 DLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
>BC112142-1|AAI12143.1| 757|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 protein.
Length = 757
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 312 NFKKYFMNYNLIDMLNVIVYEKINSLKNF---GNRYAIYKPSLLEEFRTLNWLL 464
+ +K ++ N I +++ + +NSL NR KP + E+ L WL+
Sbjct: 151 DLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
>AY899850-1|AAX85198.1| 724|Homo sapiens LGR7.10 protein.
Length = 724
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 312 NFKKYFMNYNLIDMLNVIVYEKINSLKNF---GNRYAIYKPSLLEEFRTLNWLL 464
+ +K ++ N I +++ + +NSL NR KP + E+ L WL+
Sbjct: 118 DLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 171
>AY899849-1|AAX85197.1| 709|Homo sapiens LGR7.2 protein.
Length = 709
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 312 NFKKYFMNYNLIDMLNVIVYEKINSLKNF---GNRYAIYKPSLLEEFRTLNWLL 464
+ +K ++ N I +++ + +NSL NR KP + E+ L WL+
Sbjct: 151 DLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
>AF190500-1|AAG17167.1| 757|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 protein.
Length = 757
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 312 NFKKYFMNYNLIDMLNVIVYEKINSLKNF---GNRYAIYKPSLLEEFRTLNWLL 464
+ +K ++ N I +++ + +NSL NR KP + E+ L WL+
Sbjct: 151 DLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 204
>AC108017-1|AAY41039.1| 260|Homo sapiens unknown protein.
Length = 260
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 312 NFKKYFMNYNLIDMLNVIVYEKINSLKNF---GNRYAIYKPSLLEEFRTLNWLL 464
+ +K ++ N I +++ + +NSL NR KP + E+ L WL+
Sbjct: 88 DLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLI 141
>BX537746-1|CAD97823.1| 1624|Homo sapiens hypothetical protein
protein.
Length = 1624
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 222 LFAVSSNLILHIFNIHRIEHKSWL 151
++A SNL+ HIFN H +HK+ L
Sbjct: 1550 IYATRSNLLRHIFNKHNDKHKAHL 1573
>BC063594-1|AAH63594.1| 632|Homo sapiens ZNF292 protein protein.
Length = 632
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 222 LFAVSSNLILHIFNIHRIEHKSWL 151
++A SNL+ HIFN H +HK+ L
Sbjct: 175 IYATRSNLLRHIFNKHNDKHKAHL 198
>AY684300-1|AAV86070.1| 618|Homo sapiens zinc finger protein 292
protein.
Length = 618
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 222 LFAVSSNLILHIFNIHRIEHKSWL 151
++A SNL+ HIFN H +HK+ L
Sbjct: 161 IYATRSNLLRHIFNKHNDKHKAHL 184
>AL139274-3|CAH73308.1| 2578|Homo sapiens protein ( Human DNA sequence
from clone RP11-393I2 on chromosome 6 Contains a
reticulocalbin 1, EF-hand calcium binding domain (RCN1)
pseudogene, nase. ).
Length = 2578
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 222 LFAVSSNLILHIFNIHRIEHKSWL 151
++A SNL+ HIFN H +HK+ L
Sbjct: 2121 IYATRSNLLRHIFNKHNDKHKAHL 2144
>AK131497-1|BAD18641.1| 930|Homo sapiens protein ( Homo sapiens
cDNA FLJ16696 fis, clone TRACH3003832, weakly similar
to Mus musculus PHD finger protein 2 (Phf2). ).
Length = 930
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 258 KVITVLP-NELTDLNMSCENFKKYFMNYNLIDMLNVIVYE 374
KVI V+ D M+ N+ KYFMN N +LNVI E
Sbjct: 190 KVIDVIDVARQADSKMTLHNYVKYFMNPNRPKVLNVISLE 229
>AK023712-1|BAB14654.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ13650 fis, clone PLACE1011433, weakly similar to
TRANSCRIPTION FACTOR IIIA. ).
Length = 627
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 222 LFAVSSNLILHIFNIHRIEHKSWL 151
++A SNL+ HIFN H +HK+ L
Sbjct: 353 IYATRSNLLRHIFNKHNDKHKAHL 376
>AB011102-1|BAA25456.1| 1563|Homo sapiens KIAA0530 protein protein.
Length = 1563
Score = 30.3 bits (65), Expect = 7.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 222 LFAVSSNLILHIFNIHRIEHKSWL 151
++A SNL+ HIFN H +HK+ L
Sbjct: 1106 IYATRSNLLRHIFNKHNDKHKAHL 1129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,717,815
Number of Sequences: 237096
Number of extensions: 1788117
Number of successful extensions: 3258
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3258
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -