Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30404
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41014-3|AAK32948.1|  519|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81540-3|CAB04404.1|  281|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF078792-2|AAC26946.1|  512|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z29094-7|CAA82342.2|  453|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AC024826-12|AAF60792.1|  323|Caenorhabditis elegans Hypothetical...    29   4.5  
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z92777-7|CAI79120.1|  294|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z70309-5|CAB54290.2|  402|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z70309-4|CAA94359.2|  388|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.      28   7.8  

>U41014-3|AAK32948.1|  519|Caenorhabditis elegans Hypothetical
           protein C06G1.1 protein.
          Length = 519

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +3

Query: 258 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINSLKNFGNRYAIYKP--SL 431
           +++ VL N + +  +S   F++YF+NY L+    V    +  +LK+ GN + I +   + 
Sbjct: 207 ELVPVLSNRIMNTPLSASLFEQYFINYALLG--PVEFSSQAITLKHRGNSFGILRQGRTR 264

Query: 432 LEEFR 446
           L +FR
Sbjct: 265 LNDFR 269


>Z81540-3|CAB04404.1|  281|Caenorhabditis elegans Hypothetical
           protein F46B3.3 protein.
          Length = 281

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 264 LLCNNFIGIFEPTNLFAVSSNLILHIFNIHRIE 166
           ++C N + +F P N F    +L  H+FN+H  E
Sbjct: 225 VVCGNSVKVFLP-NQFITEGHLPQHVFNLHETE 256


>AF078792-2|AAC26946.1|  512|Caenorhabditis elegans Hypothetical
           protein Y40D12A.2 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 7   YPSFALEFRKYLDDNSPYPKPYEFISSSVKSDENNMAIKHLMSDLKLAEPTFMFNP 174
           Y  + L F  YL+ N PYP P+E I    K+   N   K ++ +  + +  + + P
Sbjct: 264 YDPYFLYFACYLNPNLPYP-PHEEIRKLQKNVLRNNLYKKIIGESPVLKNKYFYPP 318


>Z29094-7|CAA82342.2|  453|Caenorhabditis elegans Hypothetical
           protein C07A9.8 protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +3

Query: 270 VLPNELTDLNMSCENFKKYFMNYN-LIDMLNVIVYEK 377
           +LP+EL   N     ++KY++++N  +++LNV   EK
Sbjct: 206 MLPHELEKFNSIKSRYQKYWVSFNWALELLNVAKTEK 242


>AC024826-12|AAF60792.1|  323|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.11 protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -2

Query: 722 FCPAPLRVAFQAVWTASGTISIPWKCP-TSAFGNIFFNHSTVFVIPARDFQENQYVIFG 549
           FCP  +R+    V      +  PWKCP  S   ++  N+   F    +   +N+ +++G
Sbjct: 125 FCPEKVRIG--TVGDGGKWVCNPWKCPNNSVMFSLGLNNWITFEEEWQKLTDNRNILYG 181


>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical
           protein F54F2.1 protein.
          Length = 1226

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 25  EFRKYLDDNSPYPKPYEFISSSVKSDEN 108
           + R  LDD+SP P+ Y F+   VKSD +
Sbjct: 530 DLRFNLDDHSPEPRAY-FLQKDVKSDRS 556


>Z92777-7|CAI79120.1|  294|Caenorhabditis elegans Hypothetical
           protein C17H1.10 protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 195 VSNSNLLQTNWLARKFR*NCCKVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIVY 371
           +SN    Q +    K   +C K + V+ + L DL + CE+  KY  +Y+  DM  +I Y
Sbjct: 128 LSNIESGQASLAVIKHMESCIKSVNVISDLLKDLKILCED--KYNYDYSPTDM-KIIKY 183


>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
            C35C5.1 protein.
          Length = 2962

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 55   PYPKPYEFISSSVKSDENNMAIKHLMSDL-KLAEPTFMFNPVDVEN 189
            P  +   + +SS++S+EN MA+   ++ L +     F FN  D EN
Sbjct: 1347 PIEQTCRYFTSSIESNENRMAVNEQLNKLFENMANCFTFNIQDGEN 1392


>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
            protein C35C5.1 protein.
          Length = 2962

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 55   PYPKPYEFISSSVKSDENNMAIKHLMSDL-KLAEPTFMFNPVDVEN 189
            P  +   + +SS++S+EN MA+   ++ L +     F FN  D EN
Sbjct: 1347 PIEQTCRYFTSSIESNENRMAVNEQLNKLFENMANCFTFNIQDGEN 1392


>Z70309-5|CAB54290.2|  402|Caenorhabditis elegans Hypothetical
           protein R102.5b protein.
          Length = 402

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 19/82 (23%), Positives = 41/82 (50%)
 Frame = +1

Query: 43  DDNSPYPKPYEFISSSVKSDENNMAIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQ 222
           +D +P   P   + +S +S E  +    ++S+ + +  + + N  DVE+ +  +RT    
Sbjct: 91  EDRTPMSTPLASLVNSSQSPEFTLQNMSIVSESECSNNSSLVNVADVESTEIALRTSLLL 150

Query: 223 IGWLENSDEIVAK**QSYLMNS 288
           +  L++  +  AK  +S L+ S
Sbjct: 151 VSELKSQLQ-AAKMSESTLLKS 171


>Z70309-4|CAA94359.2|  388|Caenorhabditis elegans Hypothetical
           protein R102.5a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 19/82 (23%), Positives = 41/82 (50%)
 Frame = +1

Query: 43  DDNSPYPKPYEFISSSVKSDENNMAIKHLMSDLKLAEPTFMFNPVDVENMQYQIRTYCKQ 222
           +D +P   P   + +S +S E  +    ++S+ + +  + + N  DVE+ +  +RT    
Sbjct: 91  EDRTPMSTPLASLVNSSQSPEFTLQNMSIVSESECSNNSSLVNVADVESTEIALRTSLLL 150

Query: 223 IGWLENSDEIVAK**QSYLMNS 288
           +  L++  +  AK  +S L+ S
Sbjct: 151 VSELKSQLQ-AAKMSESTLLKS 171


>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
          Length = 2962

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 55   PYPKPYEFISSSVKSDENNMAIKHLMSDL-KLAEPTFMFNPVDVEN 189
            P  +   + +SS++S+EN MA+   ++ L +     F FN  D EN
Sbjct: 1347 PIEQTCRYFTSSIESNENRMAVNEQLNKLFENMANCFTFNIQDGEN 1392


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,815,072
Number of Sequences: 27780
Number of extensions: 317430
Number of successful extensions: 825
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)