Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30404
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    24   1.7  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    24   1.7  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    24   1.7  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    24   1.7  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    24   1.7  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    24   1.7  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    24   1.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   1.7  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   2.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.9  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 258 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 368
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 258 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 368
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 258 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 368
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 258 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 368
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 258 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 368
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINYIEQIPVPV 116


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 306 CENFKKYFMNYNLIDMLNVIV 368
           C N+KK + N N I+ + + V
Sbjct: 101 CNNYKKLYYNINYIEQIPIPV 121


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 306 CENFKKYFMNYNLIDMLNVIV 368
           C N+KK + N N I+ + + V
Sbjct: 101 CNNYKKLYYNINYIEQIPIPV 121


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 273 LPNELTDLNMSCENFKKYFMNYNLIDMLNVIVYEKINSLKNFGN 404
           L +E TDL M   +F K F  + ++D    +V   +  ++ FG+
Sbjct: 277 LSSEATDLRMGVASFCKAFPWHFVVDRQLELVQLGVGFMRIFGH 320


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 258 KVITVLPNELTDLNMSCENFKKYFMNYNLIDMLNVIV 368
           K+I+ L N     N +  N+K+   N N I+ + V V
Sbjct: 80  KIISSLSNNYNYSNYNNNNYKQLCYNINHIEQIPVPV 116


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 638 SAFGNIFFNHSTVFVIPARDFQENQYV 558
           +A GN +F H ++  +   DFQE  ++
Sbjct: 98  TALGNFYFVHESLKNVLLWDFQECTFI 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,835
Number of Sequences: 438
Number of extensions: 4047
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)