Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30401
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 108 4e-24
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 108 4e-24
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 97 8e-21
U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical pr... 33 0.26
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 32 0.46
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 30 1.4
Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical p... 28 5.6
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 108 bits (259), Expect = 4e-24
Identities = 42/84 (50%), Positives = 63/84 (75%)
Frame = +1
Query: 1 LTAKGRKMVVIVDPHIKREPGYFLHEDATELGYYVKDRDGKDYEGWCWPGSSSYPDFFNP 180
+ AKGRKMV IVDPHIK++ GY++++DA + G +VK DG D+EG CWPGSS Y DF++P
Sbjct: 416 VAAKGRKMVTIVDPHIKKDDGYYVYKDAKDKGLFVKRVDGSDFEGHCWPGSSEYLDFWHP 475
Query: 181 VVSRYYSDRYRFENFPGTSKDVHL 252
Y+ D++ F+ + G+S ++H+
Sbjct: 476 DTRSYWKDQFAFDRYTGSSSNLHI 499
Score = 61.7 bits (143), Expect = 5e-10
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Frame = +3
Query: 255 NDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLD 434
NDMNEPSVF+GPE+TM K+ HY G+ EHR +HN YG+ AT G++
Sbjct: 501 NDMNEPSVFSGPEITMDKESIHY----GGI-------EHREIHNMYGMMYTSATFDGMIA 549
Query: 435 RADGSTDP-SCSRGPCSQAPRDT---LR*DR*QYGGVVVPCGFRADVLVTGNXXXXXXXX 602
R G P SR R + +G + + + + G
Sbjct: 550 RTGGKERPFLLSRAGFIGTQRTAAIWTGDNTADWGHLEIAAPMTLSLSIAG----VPFVG 605
Query: 603 XXXXXXXXXPEAELMTRWYQAAAFQ 677
P+ +L++RWYQ AAFQ
Sbjct: 606 ADVGGFFGNPDEQLLSRWYQTAAFQ 630
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 511 TGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFF 621
TGDNTA+W L + PM LSL+IAG F G+DVGGFF
Sbjct: 576 TGDNTADWGHLEIAAPMTLSLSIAGVPFVGADVGGFF 612
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 452 RPFLLTRAVFAGTQRYSAV 508
RPFLL+RA F GTQR +A+
Sbjct: 556 RPFLLSRAGFIGTQRTAAI 574
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 108 bits (259), Expect = 4e-24
Identities = 42/84 (50%), Positives = 63/84 (75%)
Frame = +1
Query: 1 LTAKGRKMVVIVDPHIKREPGYFLHEDATELGYYVKDRDGKDYEGWCWPGSSSYPDFFNP 180
+ AKGRKMV IVDPHIK++ GY++++DA + G +VK DG D+EG CWPGSS Y DF++P
Sbjct: 430 VAAKGRKMVTIVDPHIKKDDGYYVYKDAKDKGLFVKRVDGSDFEGHCWPGSSEYLDFWHP 489
Query: 181 VVSRYYSDRYRFENFPGTSKDVHL 252
Y+ D++ F+ + G+S ++H+
Sbjct: 490 DTRSYWKDQFAFDRYTGSSSNLHI 513
Score = 61.7 bits (143), Expect = 5e-10
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Frame = +3
Query: 255 NDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLD 434
NDMNEPSVF+GPE+TM K+ HY G+ EHR +HN YG+ AT G++
Sbjct: 515 NDMNEPSVFSGPEITMDKESIHY----GGI-------EHREIHNMYGMMYTSATFDGMIA 563
Query: 435 RADGSTDP-SCSRGPCSQAPRDT---LR*DR*QYGGVVVPCGFRADVLVTGNXXXXXXXX 602
R G P SR R + +G + + + + G
Sbjct: 564 RTGGKERPFLLSRAGFIGTQRTAAIWTGDNTADWGHLEIAAPMTLSLSIAG----VPFVG 619
Query: 603 XXXXXXXXXPEAELMTRWYQAAAFQ 677
P+ +L++RWYQ AAFQ
Sbjct: 620 ADVGGFFGNPDEQLLSRWYQTAAFQ 644
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 511 TGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFF 621
TGDNTA+W L + PM LSL+IAG F G+DVGGFF
Sbjct: 590 TGDNTADWGHLEIAAPMTLSLSIAGVPFVGADVGGFF 626
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 452 RPFLLTRAVFAGTQRYSAV 508
RPFLL+RA F GTQR +A+
Sbjct: 570 RPFLLSRAGFIGTQRTAAI 588
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 97.5 bits (232), Expect = 8e-21
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +1
Query: 1 LTAKGRKMVVIVDPHIKREPGYFLHEDATELGYYVKDRDGKDYEGWCWPGSSSYPDFFNP 180
L K RK+V IVDPHIK++ Y+++++A + Y VKD YEG CWPG S+Y DF NP
Sbjct: 408 LADKNRKLVTIVDPHIKKDSKYYIYKEAKKNKYLVKDAKDTIYEGNCWPGDSTYIDFINP 467
Query: 181 VVSRYYSDRYRFENFPGTSKDVHL 252
+++S+++ F+ + GT+KDVH+
Sbjct: 468 KARKWWSEQFAFDKYKGTTKDVHI 491
Score = 62.1 bits (144), Expect = 4e-10
Identities = 45/146 (30%), Positives = 59/146 (40%)
Frame = +3
Query: 255 NDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLD 434
NDMNEPSVFNGPE+TM KD +H+ +EHR VHN YG +T GL
Sbjct: 493 NDMNEPSVFNGPEITMHKDAKHH-----------GEFEHRDVHNVYGFHQHSSTFEGLKA 541
Query: 435 RADGSTDPSCSRGPCSQAPRDTLR*DR*QYGGVVVPCGFRADVLVTGNXXXXXXXXXXXX 614
R++ P + T +L++ +
Sbjct: 542 RSNNEVRPFVLSRSFFAGSQRTAAVWTGDNKADWAHLKQSIPMLLSLSTAGLPFVGADVG 601
Query: 615 XXXXXPEAELMTRWYQAAAFQAVLSG 692
P+ EL+ RWYQA AFQ G
Sbjct: 602 GFFGNPDEELLVRWYQAGAFQPFFRG 627
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 511 TGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFF 621
TGDN A+W+ L S+PM LSL+ AG F G+DVGGFF
Sbjct: 568 TGDNKADWAHLKQSIPMLLSLSTAGLPFVGADVGGFF 604
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +2
Query: 452 RPFLLTRAVFAGTQRYSAV 508
RPF+L+R+ FAG+QR +AV
Sbjct: 548 RPFVLSRSFFAGSQRTAAV 566
>U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical
protein D2096.3 protein.
Length = 936
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 514 GDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKVS 630
GDNTA W L SV + + G + GSD+ GF VS
Sbjct: 591 GDNTARWGDLQTSVIGVMEFNMFGVPYVGSDICGFNGVS 629
>Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical
protein F53F4.8 protein.
Length = 856
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 514 GDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKVS 630
GDNTA W L SV + G + GSDV GF S
Sbjct: 519 GDNTARWEDLRTSVIGAQEFNLFGIPYVGSDVCGFLGTS 557
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 514 GDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGF 618
GDNTA W L SV + G + GSDV GF
Sbjct: 586 GDNTARWEDLRTSVIGAQEFNLFGIPYVGSDVCGF 620
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 256 TI*TNPVSSTVQRSPCPRTVATTSHPRTV 342
T+ T P+ +TV + P TV TTS P TV
Sbjct: 103 TVTTTPIPTTVTSTHIPTTVTTTSIPTTV 131
>Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 532 TPPYCHLSYRRVSLGACEHGPREQEGSVDPSARSSSP 422
TPP C R +S+G ++G E+E S R ++P
Sbjct: 278 TPPSCGSMSRVISVGGEDNGGFEEEEKAPSSRRKTTP 314
>Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 532 TPPYCHLSYRRVSLGACEHGPREQEGSVDPSARSSSP 422
TPP C R +S+G ++G E+E S R ++P
Sbjct: 278 TPPSCGSMSRVISVGGEDNGGFEEEEKAPSSRRKTTP 314
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -3
Query: 520 CHLSYRRVSLGACEHGPREQEGSVDPSARSSSPVLVARRFHSPY 389
C + L +C+H + + PS +S SP+ R H+P+
Sbjct: 11 CKNEFEEPILLSCQHTTCRKCSTGSPSCKSCSPIPSTSRSHTPH 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,060,528
Number of Sequences: 27780
Number of extensions: 340929
Number of successful extensions: 1004
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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