Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30398
         (527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    26   0.90 
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    26   0.90 
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   1.6  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   1.6  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    23   8.4  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   8.4  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 224 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 310
           GT +VPL   RRSP  P       HL A HS
Sbjct: 149 GTSSVPLTIHRRSPGVPHHVAEPQHLGATHS 179


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 224 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 310
           GT +VPL   RRSP  P       HL A HS
Sbjct: 149 GTSSVPLTIHRRSPGVPHHVAEPQHLGATHS 179


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 224 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 310
           GT +VPL   RRSP  P       H+ A HS
Sbjct: 125 GTSSVPLTIHRRSPGVPHHVPEPQHMGATHS 155


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 224 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 310
           GT +VPL   RRSP  P       H+ A HS
Sbjct: 125 GTSSVPLTIHRRSPGVPHHVPEPQHMGATHS 155


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 231 EQYPSNVGVLLPHSGENPCFIWWPSIQQACTQDPTQPE-DRNCL 359
           +++PS +  + P   E  CF+   +I+     D    + DR+C+
Sbjct: 76  QRFPSYLSGIFPEDPETKCFLRCVAIKLGVYCDEKGADLDRHCV 119


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -2

Query: 109 GFGETQHSVAQIIVPRFFRRFFLSXATCRCGSR 11
           G G+       +   +F R+F +    C CG +
Sbjct: 167 GRGDVPAKFKFVFADKFARKFMIWQGICSCGKK 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,364
Number of Sequences: 2352
Number of extensions: 12630
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)