Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30398
(527 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p pro... 50 1e-06
AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-P... 50 1e-06
AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-P... 50 1e-06
DQ465527-1|ABF00987.1| 2501|Drosophila melanogaster mushroom bod... 30 1.7
AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein ... 30 1.7
AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-P... 30 1.7
AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-P... 30 1.7
AY089571-1|AAL90309.1| 241|Drosophila melanogaster RE07481p pro... 28 9.0
>AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p
protein.
Length = 262
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/71 (46%), Positives = 39/71 (54%)
Frame = +1
Query: 262 YPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHCQARGVVPCLEFLPRGLLFS 441
YPT+ ++ FS+H R R NL GTV ILLAGRH Q + VV L+ L GLL
Sbjct: 88 YPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRH-QGKRVV-LLKVLASGLLLV 145
Query: 442 *LGPFAFKFVP 474
GPFA P
Sbjct: 146 -TGPFALNSCP 155
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +2
Query: 62 PRNYDLGNGVLRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVP 241
P N L G+LR+SK++M+ ++A Y+ VK+IGG KNGG RTV
Sbjct: 21 PVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVF 80
Query: 242 LKRRSPSTPLR 274
LK+ S P +
Sbjct: 81 LKKSKASYPTK 91
>AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-PB,
isoform B protein.
Length = 262
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/71 (46%), Positives = 39/71 (54%)
Frame = +1
Query: 262 YPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHCQARGVVPCLEFLPRGLLFS 441
YPT+ ++ FS+H R R NL GTV ILLAGRH Q + VV L+ L GLL
Sbjct: 88 YPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRH-QGKRVV-LLKVLASGLLLV 145
Query: 442 *LGPFAFKFVP 474
GPFA P
Sbjct: 146 -TGPFALNSCP 155
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +2
Query: 62 PRNYDLGNGVLRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVP 241
P N L G+LR+SK++M+ ++A Y+ VK+IGG KNGG RTV
Sbjct: 21 PVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVF 80
Query: 242 LKRRSPSTPLR 274
LK+ S P +
Sbjct: 81 LKKSKASYPTK 91
>AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-PA,
isoform A protein.
Length = 243
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/71 (46%), Positives = 39/71 (54%)
Frame = +1
Query: 262 YPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHCQARGVVPCLEFLPRGLLFS 441
YPT+ ++ FS+H R R NL GTV ILLAGRH Q + VV L+ L GLL
Sbjct: 69 YPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRH-QGKRVV-LLKVLASGLLLV 126
Query: 442 *LGPFAFKFVP 474
GPFA P
Sbjct: 127 -TGPFALNSCP 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 62 PRNYDLGNGVLRFSKSKMFHKKAKYK 139
P N L G+LR+SK++M+ ++A Y+
Sbjct: 21 PVNSYLKGGILRYSKAQMYKRRALYR 46
>DQ465527-1|ABF00987.1| 2501|Drosophila melanogaster mushroom body
defect protein protein.
Length = 2501
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 217 EWGNQNSTPQT*ESFYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 351
E+G+ N+T +T F ++ S G P + RR RPNL G
Sbjct: 2056 EFGDHNNTSKTPARFKFLTQRFSVGSSGLPRDELPRRKRPNLLTG 2100
>AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein
protein.
Length = 2501
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 217 EWGNQNSTPQT*ESFYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 351
E+G+ N+T +T F ++ S G P + RR RPNL G
Sbjct: 2056 EFGDHNNTSKTPARFKFLTQRFSVGSSGLPRDELPRRKRPNLLTG 2100
>AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-PA,
isoform A protein.
Length = 2328
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 217 EWGNQNSTPQT*ESFYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 351
E+G+ N+T +T F ++ S G P + RR RPNL G
Sbjct: 1883 EFGDHNNTSKTPARFKFLTQRFSVGSSGLPRDELPRRKRPNLLTG 1927
>AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-PB,
isoform B protein.
Length = 2520
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 217 EWGNQNSTPQT*ESFYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 351
E+G+ N+T +T F ++ S G P + RR RPNL G
Sbjct: 2075 EFGDHNNTSKTPARFKFLTQRFSVGSSGLPRDELPRRKRPNLLTG 2119
>AY089571-1|AAL90309.1| 241|Drosophila melanogaster RE07481p
protein.
Length = 241
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -3
Query: 462 ESKRAQLTKKQTPWEEFQTRYNPSCLAMSTSEENANSSYLQVGSDPA 322
+ KR T++ PW R P MSTS A S + P+
Sbjct: 190 KKKRVTSTRRLCPWRSRIARVRPHSARMSTSRRAAPSRVYRSSGQPS 236
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,353,783
Number of Sequences: 53049
Number of extensions: 543643
Number of successful extensions: 1296
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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