Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30398
         (527 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    25   0.48 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   5.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.8  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 24  LQVAXLRKNLRKNLGTMIWATECCVS 101
           +QVA LR++LR + G   +A E C +
Sbjct: 48  VQVANLRRHLRVHTGERPYACELCAA 73


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 60  NLGTMIWATECCVSPN 107
           N+G + W  EC   PN
Sbjct: 365 NIGIISWGAECGKYPN 380


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 474 PLTPVFPQRYV 506
           PLT VFP +Y+
Sbjct: 146 PLTEVFPDKYM 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,805
Number of Sequences: 438
Number of extensions: 3196
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)