Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30395
(348 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 172 1e-42
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 159 9e-39
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 157 6e-38
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 152 2e-36
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 136 1e-31
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 132 2e-30
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 117 6e-26
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 111 4e-24
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 84 6e-16
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 79 2e-14
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 75 4e-13
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 74 6e-13
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 73 1e-12
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 73 1e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 1e-12
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 73 2e-12
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 72 3e-12
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 71 7e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 70 1e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 69 2e-11
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 67 9e-11
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 2e-10
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 65 3e-10
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 65 4e-10
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 64 8e-10
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 63 1e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 62 3e-09
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 62 3e-09
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 61 4e-09
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 61 6e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 58 4e-08
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 54 9e-07
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 53 2e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 52 3e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 51 5e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 51 5e-06
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 3e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 3e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 48 6e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 48 6e-05
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 6e-05
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 6e-05
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 47 8e-05
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 8e-05
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 47 1e-04
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 47 1e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 2e-04
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 46 2e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 2e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 46 2e-04
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 45 4e-04
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 5e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 44 0.001
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 43 0.002
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 43 0.002
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.002
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.005
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.007
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.016
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 39 0.021
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 38 0.036
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.083
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 37 0.083
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.083
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 37 0.11
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.11
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.11
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.19
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 35 0.34
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 35 0.34
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 35 0.44
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 34 0.59
UniRef50_Q47E23 Cluster: Rhs element Vgr protein; n=1; Dechlorom... 34 0.77
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 34 0.77
UniRef50_Q00SN4 Cluster: Chromosome 18 contig 1, DNA sequence; n... 33 1.0
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 1.4
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 1.4
UniRef50_Q9FH58 Cluster: Kinesin heavy chain DNA binding protein... 33 1.8
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 2.4
UniRef50_A2DC83 Cluster: Glycosyl hydrolases family 31 protein; ... 32 2.4
UniRef50_A4CA95 Cluster: Sensor protein; n=1; Pseudoalteromonas ... 32 3.1
UniRef50_Q9AVK4 Cluster: SCARECROW; n=4; core eudicotyledons|Rep... 32 3.1
UniRef50_Q01PS5 Cluster: Glycosyl transferase, family 2 precurso... 31 4.1
UniRef50_UPI0000E81DA0 Cluster: PREDICTED: hypothetical protein;... 31 5.5
UniRef50_Q69MS7 Cluster: CLAVATA1 receptor kinase( CLV1)-like pr... 31 5.5
UniRef50_Q4UAL7 Cluster: Putative uncharacterized protein; n=1; ... 31 5.5
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_A0Z6X2 Cluster: Sensor protein; n=1; marine gamma prote... 31 7.2
UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces cere... 31 7.2
UniRef50_Q4PI38 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_Q4P0S5 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_UPI0000DB6D49 Cluster: PREDICTED: similar to Rho-GTPase... 30 9.5
UniRef50_Q9RYY7 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_Q60BX5 Cluster: Cytochrome c5530 family protein; n=1; M... 30 9.5
UniRef50_Q125N6 Cluster: Transcriptional regulator, IclR family;... 30 9.5
UniRef50_A6X2A1 Cluster: Lytic transglycosylase catalytic precur... 30 9.5
UniRef50_A4A2A7 Cluster: Glucuronyl hydrolase, putative; n=1; Bl... 30 9.5
UniRef50_A2WJ06 Cluster: Ribose/xylose/arabinose/galactoside ABC... 30 9.5
UniRef50_A0KR56 Cluster: Protoporphyrinogen oxidase; n=17; Shewa... 30 9.5
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 30 9.5
UniRef50_A7RCT7 Cluster: Erythrocyte membrane protein; n=1; Plas... 30 9.5
UniRef50_A4RF20 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_A3LRX8 Cluster: Predicted protein; n=6; Saccharomycetal... 30 9.5
UniRef50_A2QJC3 Cluster: Similarity to EST an_2064 -Aspergillus ... 30 9.5
UniRef50_P18751 Cluster: Oocyte zinc finger protein XlCOF7.1; n=... 30 9.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 172 bits (419), Expect = 1e-42
Identities = 79/83 (95%), Positives = 82/83 (98%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++
Sbjct: 104 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIV 163
Query: 185 PVRRGYWGNKIGKPHTVPCKVTG 253
PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 164 PVRRGYWGNKIGKPHTVPCKVTG 186
Score = 60.9 bits (141), Expect = 6e-09
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+CGSV VRLIPAPRGTGIV APVPKKLL MAG
Sbjct: 187 RCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAG 218
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 159 bits (387), Expect = 9e-39
Identities = 74/83 (89%), Positives = 77/83 (92%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++
Sbjct: 44 DEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIV 103
Query: 185 PVRRGYWGNKIGKPHTVPCKVTG 253
PV RGYWGNKIGKPHTVPCKVTG
Sbjct: 104 PVCRGYWGNKIGKPHTVPCKVTG 126
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 157 bits (380), Expect = 6e-38
Identities = 73/83 (87%), Positives = 78/83 (93%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 185 PVRRGYWGNKIGKPHTVPCKVTG 253
P+R+GYWGNKIGKP+TVPCKVTG
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTG 130
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +1
Query: 244 GHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
GH CGSV V LIPAPRGTG+V APVPKKLL MAG
Sbjct: 130 GH--CGSVLVCLIPAPRGTGMVSAPVPKKLLMMAG 162
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 152 bits (368), Expect = 2e-36
Identities = 64/84 (76%), Positives = 78/84 (92%)
Frame = +2
Query: 2 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 181
NDEV+K++PVQKQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS+
Sbjct: 76 NDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSI 135
Query: 182 LPVRRGYWGNKIGKPHTVPCKVTG 253
+P+RRGYWG +G PHTVP KV+G
Sbjct: 136 MPIRRGYWGTALGDPHTVPVKVSG 159
Score = 56.0 bits (129), Expect = 2e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 235 PLQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
P++ +CGSVTVRL+PAPRG G+V APV K+ LQ+AG
Sbjct: 154 PVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAG 191
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 136 bits (328), Expect = 1e-31
Identities = 60/83 (72%), Positives = 73/83 (87%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEV+KI PVQKQT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++
Sbjct: 94 DEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIV 153
Query: 185 PVRRGYWGNKIGKPHTVPCKVTG 253
PVRRGYWG+K+G+PHT+P KV G
Sbjct: 154 PVRRGYWGSKLGEPHTIPTKVHG 176
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +1
Query: 235 PLQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
P + H +CGSV VRLIPAPRG GIV + KK+L MAG
Sbjct: 171 PTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAG 208
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 132 bits (319), Expect = 2e-30
Identities = 57/83 (68%), Positives = 70/83 (84%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+
Sbjct: 78 DEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVI 137
Query: 185 PVRRGYWGNKIGKPHTVPCKVTG 253
P+RRGYWG +G+PH++ K TG
Sbjct: 138 PIRRGYWGTNLGQPHSLATKTTG 160
Score = 56.0 bits (129), Expect = 2e-07
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+CGSVTVRLIPAPRG+GIV +P KKLLQ+AG
Sbjct: 161 KCGSVTVRLIPAPRGSGIVASPAVKKLLQLAG 192
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 117 bits (281), Expect = 6e-26
Identities = 53/66 (80%), Positives = 59/66 (89%)
Frame = +2
Query: 56 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 235
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 236 PCKVTG 253
P KVTG
Sbjct: 121 PGKVTG 126
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+CGSV VRLIPAPRGTG V APVPKKLL MAG
Sbjct: 127 RCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAG 158
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 111 bits (266), Expect = 4e-24
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++
Sbjct: 65 EEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIR 124
Query: 185 PVRRGYWGNKIGKPHTVPCKVTG 253
PVR G W GKPHTV CK +G
Sbjct: 125 PVRLGLWDGAQGKPHTVSCKGSG 147
Score = 44.8 bits (101), Expect = 4e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 241 QGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+G +CG+ V++IPAPRGTGI+ V KK+ ++AG
Sbjct: 144 KGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAG 179
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 84.2 bits (199), Expect = 6e-16
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +2
Query: 14 LKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR 193
++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGAIIL + S+
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAW 66
Query: 194 RGYWGNKIGKPHTVPCKVT 250
G+ GNKI KPHTV C+VT
Sbjct: 67 GGWSGNKIAKPHTVSCRVT 85
Score = 40.3 bits (90), Expect = 0.009
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1
Query: 262 SVTVRLIPAPRGTGIVFAPVPKKLLQMA 345
SV V I APRGT I+ APVPKKLL+MA
Sbjct: 90 SVLVHHISAPRGTDILSAPVPKKLLRMA 117
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 79.4 bits (187), Expect = 2e-14
Identities = 46/83 (55%), Positives = 54/83 (65%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+ IIL KL ++
Sbjct: 92 DEVLKSLPEQKGTRVGQY--YKA----GDYNGHVITGLD---EVANTIQRVIILTKLPIV 142
Query: 185 PVRRGYWGNKIGKPHTVPCKVTG 253
PV RGY G+K KPHTV CKVTG
Sbjct: 143 PVWRGYCGSKTSKPHTVLCKVTG 165
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 259 GSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
GSV++ LIPAPR T I AP+PKKLL MAG
Sbjct: 167 GSVSLHLIPAPRDTVISSAPMPKKLLMMAG 196
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 74.5 bits (175), Expect = 4e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 112
DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 79 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 74.1 bits (174), Expect = 6e-13
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 181
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 182 LPVRR--GYWGNKIGKPHTVPCKVTG 253
+ ++R G W + +PH+VP V G
Sbjct: 122 IEIKRGCGSWECRCRRPHSVPFAVEG 147
Score = 42.7 bits (96), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 259 GSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
GSV VRLIP PRG G+V V KK+L++AG
Sbjct: 150 GSVRVRLIPGPRGLGLVIGDVGKKILRLAG 179
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 73.3 bits (172), Expect = 1e-12
Identities = 32/82 (39%), Positives = 55/82 (67%)
Frame = +2
Query: 8 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 187
+V++ + V + T++G++ + K V +GD +GH+GLGVK S + I+ A+ AKL++
Sbjct: 111 KVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGIKAALRKAKLAITK 170
Query: 188 VRRGYWGNKIGKPHTVPCKVTG 253
+RRGYW + GKP+T+ K +G
Sbjct: 171 IRRGYWEIEEGKPNTIKYKTSG 192
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+ GSV V + PAP+GTGIV + +L+++G
Sbjct: 193 KAGSVVVCIKPAPKGTGIVASKFQLNVLKISG 224
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 187
EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++P
Sbjct: 57 EVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIP 116
Query: 188 VRR--GYWGNKIGKPHTVPCKVTG 253
VRR G W G+PH++P KV G
Sbjct: 117 VRRGCGSWQCTCGEPHSLPFKVVG 140
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+ GSV V L+PAP+GTG+V V K LL AG
Sbjct: 141 KAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAG 172
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++
Sbjct: 59 EQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLI 118
Query: 185 PVR--RGYWGNKIGKPHTVPCKVTGS 256
VR G W G PH++P G+
Sbjct: 119 KVRVGCGSWECGCGSPHSIPFTAKGA 144
Score = 41.5 bits (93), Expect = 0.004
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 235 PLQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
P CGSV V L+PAPRG G+V V K +L +AG
Sbjct: 138 PFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAG 175
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 72.5 bits (170), Expect = 2e-12
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = -3
Query: 247 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 68
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 67 ETCALSGTCLFLYRHDL*NLII 2
E L+GT L L HDL + ++
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVL 99
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 71.7 bits (168), Expect = 3e-12
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 181
+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA+ IR AI AKL++
Sbjct: 34 DDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNM 93
Query: 182 LPVRR--GYWGNKIGKPHTVPCKVTG 253
+PV R G W + G +VP K+TG
Sbjct: 94 IPVMRGNGSWESGGGPGTSVPLKITG 119
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 226 THRPLQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
T PL+ + GS V L+PAP G G+V + +++L +AG
Sbjct: 111 TSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAG 151
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 70.5 bits (165), Expect = 7e-12
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +2
Query: 26 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 205
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 206 GNKIGKPHTVPCKVTG 253
G ++ +PH VPC+VTG
Sbjct: 148 GKRL-EPHMVPCRVTG 162
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+CGS+ V LIPAPRGTG V APVP KLL MAG
Sbjct: 163 RCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAG 193
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 69.7 bits (163), Expect = 1e-11
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = -3
Query: 244 LARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLE 65
L GV L+ + TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE
Sbjct: 100 LGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLE 159
Query: 64 TCALSGTCLFLYRHDL*NLII 2
+ +L+ + L L R D+ N I+
Sbjct: 160 SGSLTSSGLLLDRLDVHNFIL 180
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 69.3 bits (162), Expect = 2e-11
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI+ AI AKL+++
Sbjct: 48 DEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNII 107
Query: 185 PVRR--GYWGNKIGKPHTVPCKVTG 253
++R G W GKPHT+P V G
Sbjct: 108 EIKRGCGSWECGCGKPHTLPFLVNG 132
Score = 35.5 bits (78), Expect = 0.25
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 235 PLQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
P + + GSV+V L PAP+G G+ V K +L+MAG
Sbjct: 127 PFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAG 164
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 66.9 bits (156), Expect = 9e-11
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 187
EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P
Sbjct: 90 EVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNP 149
Query: 188 VRR--GYWGNKIGKPHTVPCKVTG 253
++ G W + + H+VP KV G
Sbjct: 150 IKMGCGSWECRCDQKHSVPFKVKG 173
Score = 39.5 bits (88), Expect = 0.016
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 259 GSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
GSVT+ +IPAPRG G+V K+LL++AG
Sbjct: 176 GSVTIEIIPAPRGLGLVAGGKIKRLLELAG 205
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 2e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 32 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 175
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 44.0 bits (99), Expect = 7e-04
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +1
Query: 259 GSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
GSV V LIPAPRGTGIV APV K L AG
Sbjct: 68 GSVLVHLIPAPRGTGIVSAPVLTKFLMNAG 97
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 65.3 bits (152), Expect = 3e-10
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++
Sbjct: 50 DEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNII 109
Query: 185 PVRR--GYWGNKIGKPHTVPCKVTG 253
V R G W G+PHTV + G
Sbjct: 110 DVSRGCGSWECGCGRPHTVALRTEG 134
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 238 LQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
L+ + GSV V L PAPRG G+ +K+L++AG
Sbjct: 130 LRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAG 166
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 64.9 bits (151), Expect = 4e-10
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 151
+E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 107 EEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 184 TSSKRLLG*QDRKATHRPLQGHRQ 255
+S KR+LG QDR TH P+Q R+
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRK 192
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 63.7 bits (148), Expect = 8e-10
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 187
EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P
Sbjct: 71 EVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGP 130
Query: 188 VRR--GYWGNKIGKPHTVPCKVTG 253
++ G W + + H+VP KV G
Sbjct: 131 IKLGCGSWECRCDQKHSVPFKVRG 154
Score = 35.9 bits (79), Expect = 0.19
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 235 PLQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
P + + GSV + ++PAPRG G+V ++LL++AG
Sbjct: 149 PFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAG 186
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 62.9 bits (146), Expect = 1e-09
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 109
DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 32 DEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 44.4 bits (100), Expect = 5e-04
Identities = 27/70 (38%), Positives = 34/70 (48%)
Frame = +1
Query: 88 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQCGSV 267
R Y EV QG H R ++P + ++RLLG QDR+A HRPLQG R
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
Query: 268 TVRLIPAPRG 297
L P +G
Sbjct: 119 AGALHPRAQG 128
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 62.1 bits (144), Expect = 3e-09
Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SV 181
D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V TA+ + + L S
Sbjct: 36 DKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSC 93
Query: 182 LPVRRGYWGNKIGKPHTVPCKVTG 253
LP R Y GN I KP T PCK TG
Sbjct: 94 LP--RDYCGNNIRKP-TYPCKRTG 114
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 62.1 bits (144), Expect = 3e-09
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +2
Query: 32 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYW 205
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V R G W
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 206 GNKIGKPHTVPCKVTG 253
G PH++P +V G
Sbjct: 132 ECACGAPHSIPYQVEG 147
Score = 34.7 bits (76), Expect = 0.44
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 235 PLQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
P Q + GSV V L PAP+G GIV KK+ ++AG
Sbjct: 142 PYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAG 179
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 61.3 bits (142), Expect = 4e-09
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEVL+ M Q Q RTR K F + + L V CSKEV TA + AI L +
Sbjct: 63 DEVLRTMLAQNQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LF 115
Query: 185 PVRRGYWGNKIGKPHTVPCKVTGS 256
+ GY GNKIG PHT+PC VT +
Sbjct: 116 STQTGYKGNKIGNPHTIPCDVTAT 139
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1
Query: 265 VTVRLIPAPRGTGIVFAPVPKKLLQMA 345
V V L APRGTG V A VPKKL +A
Sbjct: 144 VLVCLTTAPRGTGTVSASVPKKLPLLA 170
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 60.9 bits (141), Expect = 6e-09
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+CGSV VRLIPAPRGTGIV APVPKKLL MAG
Sbjct: 129 RCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAG 160
Score = 48.4 bits (110), Expect = 3e-05
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFK 70
DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 104 DEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 58.0 bits (134), Expect = 4e-08
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++
Sbjct: 101 DEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNII 160
Query: 185 PVRR--GYWGNKIGKPHTVPCKVTG 253
V R G W ++ G +++ K G
Sbjct: 161 EVDRGSGSWEDQPGGTNSLTRKAEG 185
Score = 34.7 bits (76), Expect = 0.44
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
+ GSVTV + PAP+G G+ A + +L++AG
Sbjct: 186 KAGSVTVEIQPAPQGLGLAAAETVRNILELAG 217
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 53.6 bits (123), Expect = 9e-07
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMA 345
+CGSV VRL APRGTGIV APVPKKLL MA
Sbjct: 129 RCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA 159
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFK 70
+EVLK MPVQKQTRAGQ TRFK
Sbjct: 104 NEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 52.8 bits (121), Expect = 2e-06
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 181
D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 165 DKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 52.0 bits (119), Expect = 3e-06
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + AK + +
Sbjct: 73 EKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEAKKTAI 132
Query: 185 --PVRRGY 202
P+ + Y
Sbjct: 133 TVPITKDY 140
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.2 bits (117), Expect = 5e-06
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+ V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A +++
Sbjct: 51 ERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLI 110
Query: 185 PVRR 196
V++
Sbjct: 111 KVKQ 114
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 259 GSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
G+ V L+PAP GTGI+ + ++++AG
Sbjct: 129 GAAKVMLLPAPEGTGIIAGGPVRAVVELAG 158
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 51.2 bits (117), Expect = 5e-06
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+ V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +++
Sbjct: 14 ERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKNLI 73
Query: 185 PV 190
V
Sbjct: 74 SV 75
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 235 PLQGHRQCGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
P + H Q GS V + PA GTG++ + +L++AG
Sbjct: 83 PHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAG 120
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 3e-05
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 185 PV 190
+
Sbjct: 71 KI 72
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 185 PV 190
V
Sbjct: 77 EV 78
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+ ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A++ AK SV+
Sbjct: 515 ERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRALVDAKKSVV 574
Query: 185 PV 190
V
Sbjct: 575 RV 576
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 47.6 bits (108), Expect = 6e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK ++
Sbjct: 80 EKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNNMY 139
Query: 185 PVR 193
V+
Sbjct: 140 KVK 142
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 47.6 bits (108), Expect = 6e-05
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+ AK +++
Sbjct: 45 EKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLI 104
Query: 185 PV 190
V
Sbjct: 105 RV 106
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 6e-05
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 185 --PVRRG 199
PV G
Sbjct: 79 TVPVENG 85
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 47.2 bits (107), Expect = 8e-05
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1
Query: 256 CGSVTVRLIPAPRGTGIVFAPVPKKLLQMAG 348
CGSV V LIPA RGTGI APVP K L MAG
Sbjct: 24 CGSVLVHLIPAHRGTGISSAPVPTKPLMMAG 54
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 206 GNKIGKPHTVPCKVTG 253
GNKIGK H V CKVTG
Sbjct: 7 GNKIGKTHIVLCKVTG 22
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 8e-05
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 185 PV 190
V
Sbjct: 209 QV 210
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 46.8 bits (106), Expect = 1e-04
Identities = 37/82 (45%), Positives = 45/82 (54%)
Frame = +2
Query: 17 KIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 196
+IMPVQ QT R FK FV+I D + H+ L KCSK+ ATAI VL V +
Sbjct: 104 EIMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWK 151
Query: 197 GYWGNKIGKPHTVPCKVTGSVV 262
G ++G TV CKVTG V
Sbjct: 152 GTRETRLGS-LTVSCKVTGQCV 172
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 253 QCGSVTVRLIPAPRGTGIVFAPVPKKLLQMA 345
QC SV + LIP R I+ APVPKKLL +A
Sbjct: 170 QCVSVLICLIPPTRN--IISAPVPKKLLLLA 198
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 46.8 bits (106), Expect = 1e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK ++
Sbjct: 17 EKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAKKQLV 76
Query: 185 PV 190
+
Sbjct: 77 RI 78
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 157
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 166
D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+ A+ IIL
Sbjct: 31 DKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 185 PV 190
V
Sbjct: 246 TV 247
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 45.6 bits (103), Expect = 2e-04
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +2
Query: 2 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 181
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 182 LPVRRGYWGNKIGKPHTVPCKVTG 253
+ + K HT+P +V G
Sbjct: 91 VKIN--------FKGHTIPHEVIG 106
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 44.8 bits (101), Expect = 4e-04
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 283 PAPRGTGIVFAPVPKKLLQMAG 348
PAPRGTGIV APVPKKLL MAG
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAG 22
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 5e-04
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 178
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 179 VLPVRRG 199
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 43.6 bits (98), Expect = 0.001
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 112
+EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 77 EEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.001
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 185 PV 190
V
Sbjct: 128 RV 129
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++++ I V K + G+R F A V +GD G +G G ++EV AI A AK +++
Sbjct: 61 EKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAAKKTMI 120
Query: 185 --PVRRG 199
P+R G
Sbjct: 121 RVPLREG 127
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 185 PV 190
V
Sbjct: 104 RV 105
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + AK +
Sbjct: 47 DRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMF 106
Query: 185 PVRR 196
V R
Sbjct: 107 SVPR 110
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 41 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 190
T+ G+R F V +GD GH+G G +KEV AI I AK +V+ V
Sbjct: 42 TKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRV 91
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 185 PV 190
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 40.7 bits (91), Expect = 0.007
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 172
++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 18 EKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 39.5 bits (88), Expect = 0.016
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +2
Query: 29 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 208
V QTR G+ + +G+ NG IGLG S + A+ A ++A +++P+RR
Sbjct: 260 VTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKNMVPIRRYEDR 319
Query: 209 NKIGKPHTVPCKVTGSVV 262
GK V K+ G+VV
Sbjct: 320 TIYGK---VKVKIAGTVV 334
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 39.1 bits (87), Expect = 0.021
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 29 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 205
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR Y
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR-YE 407
Query: 206 GNKIGKPHTVPCKVTGSVV 262
I V K++G+VV
Sbjct: 408 NRTI--YGNVTSKISGTVV 424
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 38.3 bits (85), Expect = 0.036
Identities = 27/88 (30%), Positives = 42/88 (47%)
Frame = +2
Query: 2 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 181
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 182 LPVRRGYWGNKIGKPHTVPCKVTGSVVL 265
+ V G + PH V K G+ VL
Sbjct: 76 VTV--PMHGQTL--PHEVEVKFGGARVL 99
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.083
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 160 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 62
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.1 bits (82), Expect = 0.083
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 151
++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 73 EKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 37.1 bits (82), Expect = 0.083
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = +2
Query: 29 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 208
V QTR G+ + +G+ NG +G+G S E + A A +LA ++ P+RR Y
Sbjct: 253 VANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIRNMRPIRR-YED 311
Query: 209 NKIGKPHTVPCKVTGSVV 262
I +V KV+G+VV
Sbjct: 312 RTI--YGSVTAKVSGTVV 327
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 36.7 bits (81), Expect = 0.11
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +2
Query: 29 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 208
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R Y
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR-YEN 381
Query: 209 NKIGKPHTVPCKVTGSVV 262
I V KV+G++V
Sbjct: 382 RTI--YGEVTTKVSGTIV 397
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.11
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 185 PV 190
V
Sbjct: 151 RV 152
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 36.7 bits (81), Expect = 0.11
Identities = 23/87 (26%), Positives = 42/87 (48%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +++
Sbjct: 15 EKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKNLI 74
Query: 185 PVRRGYWGNKIGKPHTVPCKVTGSVVL 265
+ G+ I PH V G+ +L
Sbjct: 75 TI-ESLEGDSI--PHEVLVDQDGAQLL 98
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.19
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 11 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 190
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 35.1 bits (77), Expect = 0.34
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = -2
Query: 329 FLGTGANTIPVPRGAGISRTVTEPHCR*PCKGRCVA 222
FLGT A +PVP GAG+ T TEP G C A
Sbjct: 36 FLGTEAEVMPVPMGAGMKSTRTEPQWPITLCGLCGA 71
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 35.1 bits (77), Expect = 0.34
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+ ++
Sbjct: 23 EKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQRMV 82
Query: 185 PV 190
V
Sbjct: 83 RV 84
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 14 LKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV- 190
L I V QTR G+ G+ NG +G+G+ S E+ A + A A ++ PV
Sbjct: 260 LVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVKNMQPVP 319
Query: 191 ---RRGYWGNKIGKPHTVPCKV 247
+R +G+ GK V K+
Sbjct: 320 RYEKRTIFGDVEGKVGAVQLKL 341
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.3 bits (75), Expect = 0.59
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 29 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 148
V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 154 VSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q47E23 Cluster: Rhs element Vgr protein; n=1;
Dechloromonas aromatica RCB|Rep: Rhs element Vgr protein
- Dechloromonas aromatica (strain RCB)
Length = 933
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -3
Query: 346 QPSEEAS*ELAQTQFQYHEGQESAGLLQNHTAGD--LARD--GVWLSDLVTPVTSSNW 185
QP+ + QF + G +SAG ++ T D A D GVWL ++TPV +NW
Sbjct: 433 QPTHTDRDRRVRVQFPWQRGAQSAGRSEHPTGADNGPASDALGVWLR-VMTPVAGANW 489
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 33.9 bits (74), Expect = 0.77
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 5 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
+++++I + + G+ R+K + +G+ G IGLGV SK + I AII AK+ L
Sbjct: 100 EKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIISAKIKAL 155
>UniRef50_Q00SN4 Cluster: Chromosome 18 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 18 contig 1, DNA
sequence - Ostreococcus tauri
Length = 47
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 195 EVTGVTRSESHTP-SLARSPAVWFCNSPADSCP 290
E RS S TP LAR+PA+W C +PA P
Sbjct: 15 ETPRAPRSWSRTPPQLARTPALWTCRAPASRTP 47
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 68 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 220
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 11 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 157
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q9FH58 Cluster: Kinesin heavy chain DNA binding
protein-like; n=5; Brassicaceae|Rep: Kinesin heavy chain
DNA binding protein-like - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1037
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 207 VTRSESHTPSLARSPAVWFCNSPADSCPSWY 299
+TRS S PSL SP+ + AD+ PSWY
Sbjct: 715 LTRSRSCRPSLLSSPSSSWLEKDADTPPSWY 745
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 2.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 8 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 169
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
>UniRef50_A2DC83 Cluster: Glycosyl hydrolases family 31 protein;
n=1; Trichomonas vaginalis G3|Rep: Glycosyl hydrolases
family 31 protein - Trichomonas vaginalis G3
Length = 874
Score = 32.3 bits (70), Expect = 2.4
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -3
Query: 313 QTQFQYHEGQESAGLLQNHTAGDLARDGVWLS----DLVTPVT-SSNW*NRQLSKDNSAS 149
Q+++ Y E ++QN T ++ DG WL D TP+T SS W + N
Sbjct: 289 QSKWGYKNQTEVEEVMQNFTISNIPYDGFWLDIDHLDHQTPLTMSSEWFDNSSKLFNKFK 348
Query: 148 NGSGDFLAALHTQTNMTVVVANGNKCLE 65
N + + A N+C+E
Sbjct: 349 NTKRGLIRITDPHMKVDADYAPYNECVE 376
>UniRef50_A4CA95 Cluster: Sensor protein; n=1; Pseudoalteromonas
tunicata D2|Rep: Sensor protein - Pseudoalteromonas
tunicata D2
Length = 636
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 65 FKAFVAIGDNNGHIGLGVKCSKEVATAI-RGAIILAKLSVLP 187
F+ FV N+GH GLG+ K+ AT I +G++ + + LP
Sbjct: 577 FEPFVTSSRNHGHTGLGLSMVKQWATKILQGSVSIKQQEELP 618
>UniRef50_Q9AVK4 Cluster: SCARECROW; n=4; core eudicotyledons|Rep:
SCARECROW - Pisum sativum (Garden pea)
Length = 819
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 38/90 (42%)
Frame = -3
Query: 304 FQYHEGQESAGLLQNHTAGDLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLA 125
+ YH ++ + N+ L+RD V + + T ++N+ L S++ + A
Sbjct: 122 YHYHNNNNNSIINNNNNNVALSRDNVAIQNFPTVTVTTNYSTMLLPSSCSSNLNNSSTSA 181
Query: 124 ALHTQTNMTVVVANGNKCLETCALSGTCLF 35
A +T +V N E C SG LF
Sbjct: 182 ANYTHYQQP-LVEEQNTLPEICGFSGLPLF 210
>UniRef50_Q01PS5 Cluster: Glycosyl transferase, family 2 precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Glycosyl
transferase, family 2 precursor - Solibacter usitatus
(strain Ellin6076)
Length = 783
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -3
Query: 226 WLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVAN 83
++ +VT + SSN N L DN +++GS DFL A Q N+ + N
Sbjct: 69 YIPSIVTAL-SSNPANEILVVDNGSTDGSADFLRAAFPQVNVLALPEN 115
>UniRef50_UPI0000E81DA0 Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 646
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3
Query: 244 LARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMT 98
+ R GVW +L+TP+ S+ QL NS S SG +A L + + T
Sbjct: 226 MLRGGVWEEELLTPLKRSHSAESQLQATNSGSFDSG--VAGLSSSSQFT 272
>UniRef50_Q69MS7 Cluster: CLAVATA1 receptor kinase( CLV1)-like
protein; n=4; Oryza sativa|Rep: CLAVATA1 receptor
kinase( CLV1)-like protein - Oryza sativa subsp.
japonica (Rice)
Length = 757
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/78 (34%), Positives = 36/78 (46%)
Frame = +3
Query: 54 SAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 233
+ HV LLPLAT T +A +PLP ALLSL S L + T + + +
Sbjct: 5 AVHVLLLLLPLATIT--------SASSAPLPLLALLSLRSSLGDPAGALRSWTYAAAASA 56
Query: 234 SLARSPAVWFCNSPADSC 287
RS A +C P +C
Sbjct: 57 GATRSLAPPWCAWPGVAC 74
>UniRef50_Q4UAL7 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 700
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 11 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 160
+L ++ T+ G+ + AIGD NG+ G+G+ +V +A I
Sbjct: 476 ILSKKRMRSMTKEGRVYFIRVITAIGDGNGYFGIGIGYGNDVNSAKNAGI 525
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 347 PAI*RSFLGTGANTIPVPRGAGISRTVTEPHCR*PCKGRCVAF 219
P + RS G GA T+P RG+G+ T T P R G A+
Sbjct: 143 PVLSRSLSGIGAVTMPNARGSGLLATFTAPMDRQKAHGVLTAW 185
>UniRef50_A0Z6X2 Cluster: Sensor protein; n=1; marine gamma
proteobacterium HTCC2080|Rep: Sensor protein - marine
gamma proteobacterium HTCC2080
Length = 276
Score = 30.7 bits (66), Expect = 7.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 65 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 172
F+ F+ ++ H GLG+ +A ++ GA+ LA+
Sbjct: 224 FQPFITTAEDGSHAGLGLTVCASIAASMGGAVTLAR 259
>UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces
cerevisiae YBR251w MRPS5 ribosomal protein S5; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P33759
Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein
S5 - Yarrowia lipolytica (Candida lipolytica)
Length = 312
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 2 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 115
N +L V+ QT G++ +F VA GD G +GLG
Sbjct: 148 NTRLLLNRIVKSQTGKGKKMQFCVLVATGDGKGMLGLG 185
>UniRef50_Q4PI38 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1014
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 315 RKHNSSTTRGRNQPDCYRTTLPVTLQGTVCGFPILLPQ*PLRTGKTDNLARIIAP 151
++H ST RGR++ R + V QG CG P+ P +RT T+ + + P
Sbjct: 732 QEHERSTCRGRDEGG--RESSDV--QGQPCGLPLASPSANIRTASTERPIKGVGP 782
>UniRef50_Q4P0S5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1700
Score = 30.7 bits (66), Expect = 7.2
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 247 HRQCGSVTVRLIPAPRGTGIVFAPV 321
+R+C ++ V ++ AP GT ++FAP+
Sbjct: 1176 NRRCTAIVVDIVRAPAGTNMIFAPM 1200
>UniRef50_UPI0000DB6D49 Cluster: PREDICTED: similar to
Rho-GTPase-activating protein 6 (Rho-type
GTPase-activating protein RhoGAPX-1); n=1; Apis
mellifera|Rep: PREDICTED: similar to
Rho-GTPase-activating protein 6 (Rho-type
GTPase-activating protein RhoGAPX-1) - Apis mellifera
Length = 744
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -1
Query: 318 WRKHNSSTTRGRNQPDCYRTTLPVTLQGTVCGFPILLPQ*PLRTGKTDNLARIIAPRMAV 139
WR + ST+R NQP + T GT G + L PLR+ + R + ++AV
Sbjct: 606 WRSRSKSTSRASNQPSVWTPQGKCTWAGTT-GRRVTLQDTPLRS--LSEIERKVLCKVAV 662
Query: 138 A 136
A
Sbjct: 663 A 663
>UniRef50_Q9RYY7 Cluster: Putative uncharacterized protein; n=1;
Deinococcus radiodurans|Rep: Putative uncharacterized
protein - Deinococcus radiodurans
Length = 1626
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 8 EVLKIMPVQKQTRAGQRTRFKAF-VAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 184
++L P Q R R A + GD L + V+ A R +LA L
Sbjct: 914 DLLPTSPAWMQAVNDARDRVLAVELERGDLETPATLPALALQSVSGAARTLRLLAGLGKQ 973
Query: 185 PVRRGYWGNKIGKPHT 232
P+RRGY G+ +GK T
Sbjct: 974 PLRRGYSGHSLGKDAT 989
>UniRef50_Q60BX5 Cluster: Cytochrome c5530 family protein; n=1;
Methylococcus capsulatus|Rep: Cytochrome c5530 family
protein - Methylococcus capsulatus
Length = 969
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 167 AKL-SVLPVRRGYWGNKIGKPHTVPCKV 247
AKL SV + G W N + KP VPC+V
Sbjct: 67 AKLASVTASKSGAWSNTLSKPAAVPCRV 94
>UniRef50_Q125N6 Cluster: Transcriptional regulator, IclR family;
n=1; Polaromonas sp. JS666|Rep: Transcriptional
regulator, IclR family - Polaromonas sp. (strain JS666 /
ATCC BAA-500)
Length = 278
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -3
Query: 148 NGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHD 20
NG +AA+ ++N+++ V GN+ L C+ G Y D
Sbjct: 114 NGEALVIAAVDNESNVSITVKPGNRPLPHCSAQGRIALAYATD 156
>UniRef50_A6X2A1 Cluster: Lytic transglycosylase catalytic
precursor; n=1; Ochrobactrum anthropi ATCC 49188|Rep:
Lytic transglycosylase catalytic precursor -
Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168)
Length = 712
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -1
Query: 216 ILLPQ*PLRTGKTDNLARIIAPRMAVATSLLHFTPKPI*PLLSPMATNALKRVRCPARV 40
I L Q L +G LAR AP + + TPKP P+ T+A+ R+ PA +
Sbjct: 29 ISLAQSSLPSGVPTPLARPFAPTTTHQSPMNLVTPKPRPATPDPVVTSAVSRMENPAAI 87
>UniRef50_A4A2A7 Cluster: Glucuronyl hydrolase, putative; n=1;
Blastopirellula marina DSM 3645|Rep: Glucuronyl
hydrolase, putative - Blastopirellula marina DSM 3645
Length = 372
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 168 LSCLFYQFEEVTGVTRSESHTPSLARSPAVWFCNSPADSCPSW 296
L+ Y + +V +T+ E R+ W N PAD P W
Sbjct: 222 LAWSLYGYSKVYALTQMEEFLAIAERNADYWLANLPADGVPLW 264
>UniRef50_A2WJ06 Cluster: Ribose/xylose/arabinose/galactoside
ABC-type transport system permease component; n=2;
Burkholderia dolosa AUO158|Rep:
Ribose/xylose/arabinose/galactoside ABC-type transport
system permease component - Burkholderia dolosa AUO158
Length = 362
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Frame = +1
Query: 43 TCRTAHTFQGICCHWRQQRSYWFGCEVQ---QGSRHCH----SRRYYPC*VVCFTSSKR 198
TCR CC R R +W G + GSR C SRR+ P C SS+R
Sbjct: 190 TCRAWPATGSRCCCSRSSRCWWCGSAARGAATGSRSCRCGRTSRRWSPPARCCSRSSRR 248
>UniRef50_A0KR56 Cluster: Protoporphyrinogen oxidase; n=17;
Shewanella|Rep: Protoporphyrinogen oxidase - Shewanella
sp. (strain ANA-3)
Length = 184
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 33 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAAR-KSPLPFEALLSLLSCLFYQFEEVTGV 209
R H A+ L L V LV + SAA K P L++L +C+ Y + +
Sbjct: 11 RGGHTAKIANAIAQQLTLRGAKVDLVDINSAAATKINWPDYQLVALGACVLYGTYDKSVF 70
Query: 210 TRSESHTPSLARSPAVWFC 266
E H P+L+ P +FC
Sbjct: 71 QFIEQHAPALSALPNSFFC 89
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 30.3 bits (65), Expect = 9.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 70 LETCALSGTCLFLYRHDL 17
LE+CAL TC+ +Y HD+
Sbjct: 965 LESCALDDTCVIVYEHDM 982
>UniRef50_A7RCT7 Cluster: Erythrocyte membrane protein; n=1;
Plasmodium falciparum|Rep: Erythrocyte membrane protein
- Plasmodium falciparum
Length = 161
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 45 VPDSAHVSRHLLPLATTTV 101
+P SAH S HLLP+ TTV
Sbjct: 80 IPSSAHSSNHLLPIPRTTV 98
>UniRef50_A4RF20 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 820
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 307 QFQYHEGQESAGLLQNHTAGDLARDGVWLSDLVTPVTS 194
Q QYHE SAG T + R G SD+ PVT+
Sbjct: 492 QHQYHERSNSAGSTPEATPTAIYRFGTPFSDMDVPVTA 529
>UniRef50_A3LRX8 Cluster: Predicted protein; n=6;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 343
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 29 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE-VATAIRGAIILAKLSVLPVRR 196
V +T G F +GD NG IGLG+ S++ + TA A A ++ P+ R
Sbjct: 191 VSLKTSKGNIPNFFVLTVVGDRNGTIGLGIGKSRDGIRTAAVKAHWNAVKNLTPIPR 247
>UniRef50_A2QJC3 Cluster: Similarity to EST an_2064 -Aspergillus
niger; n=1; Aspergillus niger|Rep: Similarity to EST
an_2064 -Aspergillus niger - Aspergillus niger
Length = 162
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = -1
Query: 324 RNWRKHNSSTTRGRNQPDCYRTTLPVTLQGTVCGFPILLPQ*PLRTGKTDNLARIIAPRM 145
RN + HN + TRG+ QPD RT L ++ + G + Q +R + +N A + P++
Sbjct: 60 RNKKNHNKTRTRGKVQPD--RTVLS-GVKSAIAGMNNTVGQPLMRQTEGNNDASALLPQL 116
>UniRef50_P18751 Cluster: Oocyte zinc finger protein XlCOF7.1; n=82;
Xenopus|Rep: Oocyte zinc finger protein XlCOF7.1 -
Xenopus laevis (African clawed frog)
Length = 898
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 312 KHNSSTTRGRNQPDCYRTTLPVTLQGTVCGFPIL 211
K ++ +GRNQ DC T L +QGT PI+
Sbjct: 231 KEEETSCQGRNQSDCSITPLTEQIQGTDTPTPIM 264
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,806,317
Number of Sequences: 1657284
Number of extensions: 8548633
Number of successful extensions: 26109
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 25140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26086
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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