Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30395
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   1.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   4.8  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    20   6.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   6.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   6.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   8.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   8.3  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 178 RQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNK 74
           ++  K NS +NGS D +      ++    + NG+K
Sbjct: 275 KEKDKPNSTTNGSPDVIKVEPELSDSEKTLCNGSK 309


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 214 LVTPVTSSNW*NRQLSKDNSASNGSGD 134
           L+   T+S+   R  +  NSASN SGD
Sbjct: 330 LLRHYTASSKNYRSATGGNSASNSSGD 356


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 287 PLVVLELCLRQFLRSFFR 340
           PL+V+E C R  L+++ R
Sbjct: 528 PLLVVEYCSRGDLQTYLR 545


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 27  LYRNKHVPDSAHVSRHL 77
           L + K  PD A + RHL
Sbjct: 51  LEKGKCTPDGAELKRHL 67


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 221 KPHTVPCKVT 250
           + HT+PCK T
Sbjct: 2   RTHTLPCKCT 11


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 252 AVWFCNSPADSCPSWYWNC 308
           A++  +  +DS   WYW C
Sbjct: 17  AIYVSSRKSDS-GIWYWQC 34


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +3

Query: 213 RSESHTPSLARSPAVWFCNSPADSCPSWY 299
           +  +H P L   P+      P D  PS Y
Sbjct: 373 KQRTHQPFLLNIPSEGIKVEPRDKAPSPY 401


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 4/8 (50%), Positives = 5/8 (62%)
 Frame = +3

Query: 288 PSWYWNCV 311
           P W W C+
Sbjct: 54  PQWTWQCI 61


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 301 GIVFAPVPKK 330
           GI+F P+P K
Sbjct: 768 GILFVPIPNK 777


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,480
Number of Sequences: 336
Number of extensions: 2045
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)