Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30394
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 34 0.13
SB_32459| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_38309| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 33 0.22
SB_52027| Best HMM Match : DUF701 (HMM E-Value=1) 31 0.68
SB_41234| Best HMM Match : CASP_C (HMM E-Value=0.79) 31 0.68
SB_24373| Best HMM Match : Skb1 (HMM E-Value=1.6e-05) 31 0.68
SB_22414| Best HMM Match : Taeniidae_ag (HMM E-Value=5.1) 31 0.68
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 31 0.90
SB_30818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_11533| Best HMM Match : Baculo_PEP_C (HMM E-Value=3.6) 30 1.6
SB_4012| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12) 30 2.1
SB_14107| Best HMM Match : Herpes_UL3 (HMM E-Value=4.8) 30 2.1
SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3) 29 2.7
SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_23713| Best HMM Match : Disintegrin (HMM E-Value=6.6e-05) 29 2.7
SB_17095| Best HMM Match : GRP (HMM E-Value=1.6) 29 2.7
SB_6396| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_36427| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-25) 29 3.6
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056) 29 3.6
SB_15136| Best HMM Match : Peptidase_S13 (HMM E-Value=0.27) 29 3.6
SB_35503| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.3
SB_43284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_33965| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_55650| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_49696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077) 28 6.3
SB_22788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_59382| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_25673| Best HMM Match : MFS_1 (HMM E-Value=0.18) 28 6.3
SB_57501| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 28 8.4
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 8.4
SB_32284| Best HMM Match : FGGY_N (HMM E-Value=2.6e-07) 28 8.4
SB_26281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_45628| Best HMM Match : DUF1639 (HMM E-Value=0.19) 28 8.4
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_3182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_2028| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 246 FPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYG 425
+ +G +G ++ S +GAA G +G I V P + K++I V+ +AIYG
Sbjct: 9 YVAFFGVMGATAAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 68
Query: 426 LITAIVLSGMLEK 464
L+ A+++ + K
Sbjct: 69 LVVAVLIGSSISK 81
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
LG SV LS + A I G + V G + PR+ ++ +IF E + +YGLI A++L
Sbjct: 92 LGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 151
Query: 447 S 449
+
Sbjct: 152 T 152
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -2
Query: 440 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
+ D +GDG +D+GD D D + GC DNG+G+G GD +G
Sbjct: 581 NGGDGGCDGDGFGDDNGDGF-------GDGDGDGCDDGDGEGEGC-DNGEGDGDGDGDG 631
>SB_32459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2011
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 628 VWQHPLEQHQSPTIPNSKFPQNRFHQANSESSAEHHVSRHQ 506
+W HPL P +K P R + S +E +SRHQ
Sbjct: 1768 LWMHPLRSTHEPAAGLNKIPHTRRNSQGLASQSERSLSRHQ 1808
>SB_38309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -2
Query: 446 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVD---AHGCSDNGQGNGKG 276
++DS +T +GD ++DG + D Y D D +HG +DN +G
Sbjct: 105 KYDSHGETDDGDEYDDEDGYDKYDSHGKT-DDDDEYDDEDGYDEYDSHGETDNDDDDGDD 163
Query: 275 DSEGTPHYGEVFSKN 231
D G G+ F +N
Sbjct: 164 DGSGGKDDGDNFREN 178
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 419 NGDGLA-EDDGDQILSLDSRCFDTSSHYADT--SSVDAHGCSDNGQGNGKGDSEGT 261
+GDG +DDG S D D S Y D S D GC D+G N GD +G+
Sbjct: 393 DGDGGGCDDDGGDDSSCDDDGGDDSGCYDDGNGSVFDDEGCDDSGCVNDGGDGDGS 448
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -2
Query: 419 NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
+GDG + DDG D D D + D GC D+G + D +G
Sbjct: 364 DGDGSSCDDGGDSSGCDDDGGDDGG--CDDNDGDGGGCDDDGGDDSSCDDDG 413
>SB_52027| Best HMM Match : DUF701 (HMM E-Value=1)
Length = 270
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 LQSRYFRCTTSSMERVSR*VWDGSWRTL-PRNVGYPRNRLFRCPVRCRSSHGH 319
L+ + RCTT ++ + + + +W+ + PR++ NRLFR + R +H H
Sbjct: 152 LKRKTERCTTFAVYKDKNSLLEPTWKQVEPRSLELGENRLFRQDLFAREAHFH 204
>SB_41234| Best HMM Match : CASP_C (HMM E-Value=0.79)
Length = 296
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 422 VNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
VNGDG + DGD D D D G D+G G+G GD +G
Sbjct: 208 VNGDGNGDGDGDGNGDGDGDDGDDDGDGGGDDDGDGDGV-DDGDGDGDGDCDG 259
>SB_24373| Best HMM Match : Skb1 (HMM E-Value=1.6e-05)
Length = 494
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 446 EHDSSDQTVNGDGLAEDDGDQILSLDS-RCFDTSSHYADTSSVDAHGCSDNGQGNGKGDS 270
++++ D+ + DG DD D+ +D+ CF + D S D GC N N KG+
Sbjct: 272 DYNNDDEENDDDGNDSDDDDERNDVDNEECF-VAEICKDKSMQDVSGCIVNNSPNVKGNK 330
Query: 269 E 267
+
Sbjct: 331 Q 331
>SB_22414| Best HMM Match : Taeniidae_ag (HMM E-Value=5.1)
Length = 249
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = -2
Query: 425 TVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHYGE 246
TV DG + DGD D AD + DA GC +G G+G GD +G G+
Sbjct: 24 TVGCDGDGDGDGDG----DGDGDGDGDADADADA-DADGCDGDGDGDGDGDGDGDGDGGD 78
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -2
Query: 446 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 267
++D+ D+ +N D A DD D ++ D+ + AD ++ G D+ G+ D E
Sbjct: 219 DNDADDENINSDDDAADDADYYVNSDADDDINGDYDADDEDING-GDDDDINGDNDADDE 277
>SB_30818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Frame = -2
Query: 440 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTS------SHYADTSSVDAHGCSDNGQGNGK 279
D S + GD +DD D + D C D S +Y+ D + D+ GN
Sbjct: 21 DDSGEDDCGDNSGDDDSDDDIGDDDSCDDNSRDDDSGDYYSVDDDSDDNSIDDDSGGNSS 80
Query: 278 GDSEGTPHYGE 246
D G G+
Sbjct: 81 DDYSGEDDSGD 91
>SB_11533| Best HMM Match : Baculo_PEP_C (HMM E-Value=3.6)
Length = 491
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -2
Query: 440 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGT 261
D D +G+G +DD D D D D D +G D+ G+G GD +G
Sbjct: 393 DDDDDDGDGNG-GDDDDDDDGDGDGDDGDGDDGDNDDDDGDGNGDDDDDDGDGDGDGDGD 451
Query: 260 PHYGE 246
G+
Sbjct: 452 GDDGD 456
>SB_4012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -2
Query: 422 VNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGC----SDNGQGNGKGDSEG 264
VN DG + DGD + D D D + GC D+G G+G GD G
Sbjct: 81 VNDDGDGDGDGDGDIRGDGCVVDDDD---DDDDIQGDGCVVDDDDDGDGDGDGDIRG 134
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -2
Query: 443 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
H+ D +GDG + DGD + D C D + GC N G+G GD +G
Sbjct: 42 HEDDD---DGDGNDDCDGDDDIRGDG-CVVVD----DDDDIRGDGCVVNDDGDGDGDGDG 93
>SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12)
Length = 540
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 428 QTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
+T+N E G QI +S+ + + Y D + D G +D G G G G G
Sbjct: 37 ETINNIHSVEVSGAQIPIQNSKATNPPNLYVDNDNDDGGGDTDGGGGCGGGGGGG 91
>SB_14107| Best HMM Match : Herpes_UL3 (HMM E-Value=4.8)
Length = 314
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 413 DGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
DG +DDGD D C D GC +G G+G GD +G
Sbjct: 19 DGDGDDDGDDDGGGD--CGGDGDGDGDGDGDGDGGCDGDGDGDGDGDDDG 66
>SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 99
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -2
Query: 440 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 267
D D +GDG DDGD +D D D G D+G G GD +
Sbjct: 14 DDGDDGDDGDGDNGDDGDD-GDVDDNVCDGDGDDGDDGDNVCDGDGDDGDGGDDGDDD 70
>SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 401 EDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
++DGD +D C D D GC +G+GNG GD +G
Sbjct: 9 DNDGDDDNDVDGDC---GGDGGDGVGGDG-GCCGDGEGNGDGDGDG 50
>SB_23713| Best HMM Match : Disintegrin (HMM E-Value=6.6e-05)
Length = 1154
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/66 (33%), Positives = 27/66 (40%)
Frame = -2
Query: 443 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
+D D +GDG + DGD D D Y D D G DNG G GDS+
Sbjct: 144 NDDGDGDGDGDGDGDGDGDGNDDGDGDGNDDGDGYGDGDG-DGDGDGDNG---GLGDSDC 199
Query: 263 TPHYGE 246
G+
Sbjct: 200 NDDCGD 205
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = -2
Query: 443 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDT--SSHYADTSSVDAHGCSDNGQGNGKGDS 270
+D D +GDG + DGD DS C D + D+ DN +G GD
Sbjct: 172 NDDGDGYGDGDGDGDGDGDNGGLGDSDCNDDCGDGDFGGNGDYDSSVVYDNDGDDGSGDD 231
Query: 269 EGTPHYGEVFSKNHPKLICSPFPLRT 192
GE + + ++ P RT
Sbjct: 232 HDG---GEYRTSSRTMILLLPSEYRT 254
>SB_17095| Best HMM Match : GRP (HMM E-Value=1.6)
Length = 203
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -2
Query: 413 DGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 264
DG DD D I D+ + D D DN G GKG+ +G
Sbjct: 75 DGADNDDDDDIDRTDNDGCGNDVDHDDNGDYDDCIDDDNNDGGGKGNGDG 124
>SB_6396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 356 DTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHYGEVFSK 234
D+ HY T S +G +D+ G DS+ PHYG S+
Sbjct: 311 DSQPHYGATDSQPHYGATDSQPHYGATDSQ--PHYGATDSQ 349
>SB_36427| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-25)
Length = 314
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 603 CCSNGCCQTLPWFVKILIG*KFLGSSIGSF 692
C +G C T P F+K L+ +++ S + F
Sbjct: 262 CTLSGSCSTSPAFIKFLVAGRYINSCVNFF 291
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 341 YADTSSVDAHGCSDNGQGNGKGDSEGTPHYG 249
YAD S +G D G GNG S G YG
Sbjct: 240 YADNSWSGGYGSYDGGYGNGGDYSNGYSSYG 270
>SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -2
Query: 446 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 267
+ D D +GDG + DGD D D + G +G G+G GD +
Sbjct: 761 DDDDDDDDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGAGAGDGGGDGDGDGDGDGDGD 820
Query: 266 G 264
G
Sbjct: 821 G 821
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -2
Query: 446 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 267
+ D D +GDG + DGD D D A +G G+G GD +
Sbjct: 759 DDDDDDDDDDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGAGAGDGGGDGDGDGDGDGD 818
Query: 266 G 264
G
Sbjct: 819 G 819
>SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056)
Length = 508
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = -2
Query: 440 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGT 261
+ D +GDG + DGD D D + D D+ G+G DS+GT
Sbjct: 422 NDDDSDGDGDGDYDSDGDGDYDSDGDGDDDDNGDGDVDGGGDGDDDDDSDGDGDDDSDGT 481
>SB_15136| Best HMM Match : Peptidase_S13 (HMM E-Value=0.27)
Length = 638
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 446 EHDSSDQTV-NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDS 270
+ DS D V +GDG E +GD + D A D G G G+G GDS
Sbjct: 525 DDDSCDDDVGDGDGGGEGNGDGYEDVG----DGDDDGAGDGGGDGDGDGYEGVGDGNGDS 580
Query: 269 EG 264
+G
Sbjct: 581 DG 582
>SB_35503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 26.2 bits (55), Expect(2) = 4.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 452 TREHDSSDQTVNGDGLAEDDGD 387
+R+H D +NGDG + DGD
Sbjct: 50 SRDHVDCDCDLNGDGHGDGDGD 71
Score = 21.4 bits (43), Expect(2) = 4.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -2
Query: 299 NGQGNGKGDSEGTPHYGEVF 240
+G G+G GD + + G +F
Sbjct: 65 HGDGDGDGDDDDNNNDGNIF 84
>SB_43284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/67 (28%), Positives = 24/67 (35%)
Frame = -2
Query: 446 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 267
+ D D +GDG + DGD D D D G D+G G G S
Sbjct: 117 DDDDDDDDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGGGSDDGGDDDDGDGGGSNGSG 176
Query: 266 GTPHYGE 246
G G+
Sbjct: 177 GGDDGGD 183
>SB_33965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 356 DTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHY 252
D S +T +GC+D+G +G DS G ++
Sbjct: 107 DHSDQRDNTIGSSRYGCNDDGDSDGDSDSHGNDYH 141
>SB_55650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 532 RWTRCWLGEIYSVGICCWVS 591
RW C L ++ SV CCW S
Sbjct: 833 RWAPCGLAKVLSVPHCCWGS 852
>SB_49696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 273
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -2
Query: 377 SLDSRCFDTSSHYADTSSVDAH---GCSDNGQGNGKGDSEGTPHYGEVFSKNHPKL 219
S + +C D +YAD S +D GCS G +G +E +Y + H +L
Sbjct: 60 STEDKCSDMPCYYADNSDLDLRLDKGCSVVFGGKTEGLNEPVNYYNNSCASFHLEL 115
>SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077)
Length = 1043
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 611 RAAPEPHDT-QQQIPTE*ISPSQQRVQRRTSRIP 513
R++P+ H+ QQQ+P SP Q +Q+R +P
Sbjct: 783 RSSPQRHEEGQQQLPGGNHSPGQHHMQQRREALP 816
>SB_22788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 386 QILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHYGE 246
QI S D+ FD + ++ D + + +G+G+G GD +G G+
Sbjct: 48 QIRSEDNLSFDQNWFLLIKNTNDDNNGNGDGEGDGNGDGDGDGRNGD 94
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 643 TNQGSVWQHPLEQHQSPTIPNSKFPQNRFHQANSESSAEHHVSRHQ 506
T Q +H +H+S S+ ++R H+ + S+ H SRH+
Sbjct: 11 TKQHETSRHERSRHESNRHKTSRHERSR-HETSRHESSPHETSRHE 55
>SB_59382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 650 DLDEPRQRLAASVRAAPEPHDTQQQIPTE*ISPSQQRVQRRTSR 519
DLD ++ AAS R+ PH QQ++P ++ Q++ +R+ R
Sbjct: 42 DLDLHKRISAASKRSTKRPHRPQQKMPD--LATVQEKSSKRSCR 83
>SB_25673| Best HMM Match : MFS_1 (HMM E-Value=0.18)
Length = 634
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = -2
Query: 443 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDA--HGCSDNGQGNGKGDS 270
+DS D V+GDG DDGD D S Y D D G G+G GD
Sbjct: 348 YDSGDSGVDGDG-GGDDGDD----DGGDSGDSGVYGDGDGDDGDDDGGDSGVDGDGYGDV 402
Query: 269 EG 264
+G
Sbjct: 403 DG 404
>SB_57501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -2
Query: 440 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 267
D D N D +DD D + D D D D++ DNG GN D +
Sbjct: 74 DDDDDDDNDDD-KDDDDDDVDDDDDDNDDDDDDSDDDDDNDSNDDDDNGDGNDDDDDD 130
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 431 DQTVNGDGLAED-DGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPH 255
D V+G G+ +D DGD DS C D D D G D G+G GD +G
Sbjct: 16 DDGVDGGGVGDDGDGD-----DSDCGD------DGGGDDDGGDDDGVDGDGDGDGDGVDG 64
Query: 254 YGE 246
G+
Sbjct: 65 DGD 67
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/65 (27%), Positives = 23/65 (35%)
Frame = -2
Query: 440 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGT 261
D SD DG +D GD D + D S D D+G +G G G
Sbjct: 238 DGSDDDGGDDGSDDDGGDDGSDDDGGDDGSDDDVGDNGSDDGIDDVDSGDNDGDGSDGGG 297
Query: 260 PHYGE 246
G+
Sbjct: 298 DDNGD 302
>SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 929
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 290 PVRCRSSHGHPHYWCQHSGRRCQS 361
P+RCR HP++W H R ++
Sbjct: 67 PIRCRYLRLHPYHWRSHISLRMEA 90
>SB_32284| Best HMM Match : FGGY_N (HMM E-Value=2.6e-07)
Length = 582
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 479 KWFRIFLQHTREHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYAD 333
K ++FL+ R+ Q + G DDG Q+ S D D S H D
Sbjct: 354 KKHKVFLKMQRDQLEYRQMMVDTGHVIDDGGQVTSNDRPVTDDSGHVID 402
>SB_26281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 44 NRAKKGRPFRD*RVKTAPNTLTKISR*DTS*VTYSCSWWDLQSRYFRC 187
N+A+ G PF + +AP L S T+ VT C+ S+Y C
Sbjct: 77 NKARCGYPFYSEPISSAPKVLELKSEEKTAMVTTGCTIDLAASQYLHC 124
>SB_45628| Best HMM Match : DUF1639 (HMM E-Value=0.19)
Length = 662
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEPHD 588
G K+ R+QK DE + R+R A R APEPHD
Sbjct: 595 GMKKAKRRAQKLM-DEVMGMMRERSAR--RVAPEPHD 628
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 103 LNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQ 216
+ Q + ++Y+F LLV +IP + VLN GEQ
Sbjct: 424 IEQIMDQEVLMTYIFHLLVIASIPYVLVLQVLNLSGEQ 461
>SB_3182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAAS 615
GP+RP R+ KF D D D+P ++ S
Sbjct: 768 GPQRPWYRAAKFDADPDHDDPLHFVSVS 795
>SB_2028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 622 QHPLEQHQSPTIPNSKFPQNRFHQANSESSAEHHVSRH 509
+HP + Q+PTIP++ P++ +QA S S + S+H
Sbjct: 568 KHP--RSQAPTIPSTHDPKHPRYQAPSIPSTHYLYSKH 603
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,020,729
Number of Sequences: 59808
Number of extensions: 565689
Number of successful extensions: 2535
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 2060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2435
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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