Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30394
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 106 2e-23
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 106 2e-23
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 54 1e-07
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 50 2e-06
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 50 2e-06
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 50 2e-06
Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr... 30 1.8
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein. 30 1.8
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 29 4.2
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 29 4.2
AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical ... 29 4.2
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 29 4.2
Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 28 5.6
AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm rece... 28 5.6
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 28 5.6
Z83234-3|CAE17873.1| 116|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 28 7.4
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 28 7.4
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 28 7.4
Z19154-4|CAA79556.1| 139|Caenorhabditis elegans Hypothetical pr... 28 7.4
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 28 7.4
DQ340629-1|ABC65817.1| 116|Caenorhabditis elegans chondroitin p... 28 7.4
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 28 7.4
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 28 7.4
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 28 7.4
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 28 7.4
AF038608-10|AAC25814.2| 327|Caenorhabditis elegans Serpentine r... 28 7.4
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 28 7.4
Z81139-7|CAI46624.1| 358|Caenorhabditis elegans Hypothetical pr... 27 9.8
U80023-15|AAG24046.1| 343|Caenorhabditis elegans Serpentine rec... 27 9.8
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical ... 27 9.8
AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 106 bits (254), Expect = 2e-23
Identities = 72/161 (44%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Frame = +3
Query: 225 GMVLGEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFC 404
G L P MW LGI FS++LSV+GA GI TTG SI+GGGVKAPRI+TKNL+S+IFC
Sbjct: 40 GWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFC 99
Query: 405 EAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQN*WRDT*CSALDSLLAW*NLFC 569
EAVAI+G+I A V G L ++ P T +++ +N + NL C
Sbjct: 100 EAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVC 159
Query: 570 GNLLLGIVGLWCCSNGCCQTLPWFVKILIG*KFLGSSIGSF 692
G L +GIVG FVKILI + S+IG F
Sbjct: 160 G-LAVGIVGSGAAIADAANP-ALFVKILI-IEIFASAIGLF 197
Score = 35.9 bits (79), Expect = 0.028
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1
Query: 184 LYYVLNGKGEQISLGWFLENTSP 252
L+Y+L+G+G + +GWFL +TSP
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSP 48
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 497 AAELMAGYVMFGAGLAVGLVKSILWEFAVGYRGA 598
A L +GY++FG GL VGL +++ AVG G+
Sbjct: 136 ARNLASGYMIFGGGLTVGL-SNLVCGLAVGIVGS 168
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 106 bits (254), Expect = 2e-23
Identities = 72/161 (44%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Frame = +3
Query: 225 GMVLGEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFC 404
G L P MW LGI FS++LSV+GA GI TTG SI+GGGVKAPRI+TKNL+S+IFC
Sbjct: 40 GWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFC 99
Query: 405 EAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQN*WRDT*CSALDSLLAW*NLFC 569
EAVAI+G+I A V G L ++ P T +++ +N + NL C
Sbjct: 100 EAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVC 159
Query: 570 GNLLLGIVGLWCCSNGCCQTLPWFVKILIG*KFLGSSIGSF 692
G L +GIVG FVKILI + S+IG F
Sbjct: 160 G-LAVGIVGSGAAIADAANP-ALFVKILI-IEIFASAIGLF 197
Score = 35.9 bits (79), Expect = 0.028
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1
Query: 184 LYYVLNGKGEQISLGWFLENTSP 252
L+Y+L+G+G + +GWFL +TSP
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSP 48
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 497 AAELMAGYVMFGAGLAVGLVKSILWEFAVGYRGA 598
A L +GY++FG GL VGL +++ AVG G+
Sbjct: 136 ARNLASGYMIFGGGLTVGL-SNLVCGLAVGIVGS 168
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +3
Query: 258 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 437
+G+LG+ ++A + G+A G G I V P + K +I V+ VAIYGL+ A
Sbjct: 25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84
Query: 438 IVLSGMLEKYSEPFT 482
+++SG +E +T
Sbjct: 85 VIVSGKVEPAGANYT 99
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 300 VGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
+GA I G + V + PR+ ++ +IF E + +YG+I A++L
Sbjct: 118 LGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +3
Query: 258 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 437
+G+LG+ ++A + G+A G G I V P + K +I V+ VAIYGL+ A
Sbjct: 25 FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84
Query: 438 IVLSGMLEKYSEPFT 482
+++SG +E +T
Sbjct: 85 VIVSGKVEPAGANYT 99
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 300 VGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
+GA I G + V + PR+ ++ +IF E + +YG+I A++L
Sbjct: 118 LGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +3
Query: 258 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 437
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 438 IVLSGMLEKYS 470
+VL G + S
Sbjct: 77 MVLKGKVTSAS 87
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L +GA I G + V G + PR+ ++ +IF E + +YG+I A++L
Sbjct: 99 LAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +3
Query: 258 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 437
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 438 IVLSGMLEKYS 470
+VL G + S
Sbjct: 77 MVLKGKVTSAS 87
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L +GA I G + V G + PR+ ++ +IF E + +YG+I A++L
Sbjct: 99 LAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +3
Query: 258 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 437
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 438 IVLSGMLEKYS 470
+VL G + S
Sbjct: 77 MVLKGKVTSAS 87
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L +GA I G + V G + PR+ ++ +IF E + +YG+I A++L
Sbjct: 99 LAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +3
Query: 258 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 437
+G +G A + +V+GAA G + V I GV P + K++I VI + IYGL+ A
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76
Query: 438 IVLSGMLEKYS 470
+VL G + S
Sbjct: 77 MVLKGKVTSAS 87
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L +GA I G + V G + PR+ ++ +IF E + +YG+I A++L
Sbjct: 99 LAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
>Z83238-1|CAB05792.1| 339|Caenorhabditis elegans Hypothetical
protein T08G3.1 protein.
Length = 339
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/89 (17%), Positives = 42/89 (47%)
Frame = +3
Query: 240 EHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAI 419
+H V++ T+G+ F++ ++ A G+H+ + + P +K ++V+ ++
Sbjct: 41 KHLVVLFSTVGVLFALLEFLLYPASGLHSHSAAYIVYINNRPFDASKEFLTVLLAVYCSL 100
Query: 420 YGLITAIVLSGMLEKYSEPFTSVSVKQQN 506
Y +++ + +Y F + +K N
Sbjct: 101 YCAAISLLAVQFIYRYIAVFCPIHLKYFN 129
>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical protein
F39B2.4b protein.
Length = 1589
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 694 QKDPMEDPKNFQPMRILTNQGSVWQHPLEQHQSPTIPNSKF-PQNRFHQANSESSAEHHV 518
+++ + K QP+ + S+ Q Q+P +P+ + P + H ++ + +HH
Sbjct: 1399 EQEQEQHVKAHQPLESTPSVSSLPQMQHHLQQAPLLPSHQMMPPPQQHSSSLQHHLQHHT 1458
Query: 517 SRHQ 506
S HQ
Sbjct: 1459 STHQ 1462
>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical protein
F39B2.4a protein.
Length = 1587
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 694 QKDPMEDPKNFQPMRILTNQGSVWQHPLEQHQSPTIPNSKF-PQNRFHQANSESSAEHHV 518
+++ + K QP+ + S+ Q Q+P +P+ + P + H ++ + +HH
Sbjct: 1397 EQEQEQHVKAHQPLESTPSVSSLPQMQHHLQQAPLLPSHQMMPPPQQHSSSLQHHLQHHT 1456
Query: 517 SRHQ 506
S HQ
Sbjct: 1457 STHQ 1460
>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
Length = 1587
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 694 QKDPMEDPKNFQPMRILTNQGSVWQHPLEQHQSPTIPNSKF-PQNRFHQANSESSAEHHV 518
+++ + K QP+ + S+ Q Q+P +P+ + P + H ++ + +HH
Sbjct: 1397 EQEQEQHVKAHQPLESTPSVSSLPQMQHHLQQAPLLPSHQMMPPPQQHSSSLQHHLQHHT 1456
Query: 517 SRHQ 506
S HQ
Sbjct: 1457 STHQ 1460
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -2
Query: 461 LQHTREHDSSDQTVNGDGLAEDDGDQIL-----SLDSRCFDTSSHYADTSSV 321
+QHT SS T +GD DD + SLD + TSS + +T+SV
Sbjct: 229 VQHTNSVGSSIGTTSGDSEISDDDQKSWSPKNESLDYQPASTSSEFTETTSV 280
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -2
Query: 461 LQHTREHDSSDQTVNGDGLAEDDGDQIL-----SLDSRCFDTSSHYADTSSV 321
+QHT SS T +GD DD + SLD + TSS + +T+SV
Sbjct: 270 VQHTNSVGSSIGTTSGDSEISDDDQKSWSPKNESLDYQPASTSSEFTETTSV 321
>AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical
protein F54A5.2 protein.
Length = 360
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 320 DAHGCSDNGQGNGKGDSEGTPHYGEVFSKNHPKLICSP 207
D+HGCS G GD E T G+ NH K P
Sbjct: 209 DSHGCSLQTSGEVWGDFEVTRRNGKTIFYNHIKAWAFP 246
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 213 ADKFGMVLGEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLIS 392
+D F M G F ++G F + S+VG + S+ G+ + + N +
Sbjct: 304 SDAFTM-RGAEFASYAVSVGALFGMTTSLVGGMFALPRCVFSMADDGLLFSSLASVNPKT 362
Query: 393 VIFCEAVAIYGLITAIV 443
+ +A+ I+G +TAI+
Sbjct: 363 QVPTQALLIFGFLTAII 379
>Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical
protein W06D11.3 protein.
Length = 139
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 428 QTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 267
+TV+ + + DG++I S ++ +H DTSS D G +D+ N K E
Sbjct: 82 ETVDAEN-EQQDGEKIAS-NTGDAPNITHLVDTSSSDIAGTTDSNNNNDKKTEE 133
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 133 LSYLFVLLVGLAIPIFSLYYVLNGKG 210
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>AF016685-8|AAG24150.1| 340|Caenorhabditis elegans Seven tm
receptor protein 85 protein.
Length = 340
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 540 SLLAW*NL--FCGNLLLGIVGLWCCSNGCCQTL 632
SL+ W + FC L+ ++ ++CC CC L
Sbjct: 194 SLVDWITMIIFCCGLMFSVIIMFCCGYFCCMKL 226
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 133 LSYLFVLLVGLAIPIFSLYYVLNGKG 210
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>Z83234-3|CAE17873.1| 116|Caenorhabditis elegans Hypothetical
protein K09E4.6 protein.
Length = 116
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 419 NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGT-PHYGEV 243
+G+G E G++ + ++S + SS D +G+G+G+G + T GE
Sbjct: 34 SGEGSGESSGEKPV------VESSGEGSGESSGDKEAVEASGEGSGEGSGDATLESSGEG 87
Query: 242 FSKNHPKLICSPFP 201
++H ++ S P
Sbjct: 88 SGESHNAVVASDSP 101
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 808 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 842
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 411 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 445
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 771 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 805
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 283 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 317
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 808 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 842
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 411 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 445
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 771 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 805
>Z19154-4|CAA79556.1| 139|Caenorhabditis elegans Hypothetical
protein C40H1.5 protein.
Length = 139
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -2
Query: 341 YADTSSVDAHGCSDNGQGNGKGDSEGTPHYGEVFSKNHPKL 219
Y D +DA +G+ NG GD E + H EV + PKL
Sbjct: 44 YDDDRGIDADDLMASGKTNGNGDFEISGHEDEV-TPIDPKL 83
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = -2
Query: 662 STDEDLDEPRQRLAASVRAAPEPHDTQQQIPTE*ISPSQQRVQRRTSRIPPSVLLLDGHT 483
ST L + ++ A PH T+ + + SPS R + PPS GH
Sbjct: 1698 STGRRLSDMFSKIRRGTSADHNPHQTEHLLAQDNRSPSSPRYRSMARASPPSPAERYGHP 1757
Query: 482 SKW 474
++
Sbjct: 1758 PRY 1760
>DQ340629-1|ABC65817.1| 116|Caenorhabditis elegans chondroitin
proteoglycan-7 protein.
Length = 116
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 419 NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGT-PHYGEV 243
+G+G E G++ + ++S + SS D +G+G+G+G + T GE
Sbjct: 34 SGEGSGESSGEKPV------VESSGEGSGESSGDKEAVEASGEGSGEGSGDATLESSGEG 87
Query: 242 FSKNHPKLICSPFP 201
++H ++ S P
Sbjct: 88 SGESHNAVVASDSP 101
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = -2
Query: 662 STDEDLDEPRQRLAASVRAAPEPHDTQQQIPTE*ISPSQQRVQRRTSRIPPSVLLLDGHT 483
ST L + ++ A PH T+ + + SPS R + PPS GH
Sbjct: 1698 STGRRLSDMFSKIRRGTSADHNPHQTEHLLAQDNRSPSSPRYRSMARASPPSPAERYGHP 1757
Query: 482 SKW 474
++
Sbjct: 1758 PRY 1760
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 283 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 317
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 411 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 445
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 698 GPKRPNGRSQKFSTDEDLDEPRQRLAASVRAAPEP 594
GPK +G S + TD+D++ +R+A+ + + EP
Sbjct: 750 GPKGDDGVSMESLTDDDIERIARRVASIQKESNEP 784
>AF038608-10|AAC25814.2| 327|Caenorhabditis elegans Serpentine
receptor, class z protein78 protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 103 GIWCCFYPLIPKGTAFFRPIFALTRKLKTERSC 5
G FY L+ TAF+ PI TRK + ++C
Sbjct: 198 GFVALFYVLLFLSTAFYIPIMIRTRKFASIQNC 230
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 127 YFLSYLFVLLVGLAIPIFSLYYVLN 201
YFL +L VL + L IP++ L VL+
Sbjct: 52 YFLCFLAVLKLNLKIPVYQLMLVLS 76
>Z81139-7|CAI46624.1| 358|Caenorhabditis elegans Hypothetical
protein W05H5.5 protein.
Length = 358
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 100 YLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVL 198
Y++ LK+R F L++L +IP+F L+YVL
Sbjct: 50 YVHVTLKIRLFHRNLYIL----SIPVFFLWYVL 78
>U80023-15|AAG24046.1| 343|Caenorhabditis elegans Serpentine
receptor, class h protein200 protein.
Length = 343
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 85 KNSTKYLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVL 198
KN+ NL+ ++F++ L L+V L F +YVL
Sbjct: 229 KNTMSRRTFNLQRKFFITLLIQLIVPLVFFFFPSFYVL 266
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 610 EQHQSPTIPNSKFPQNRFHQA 548
EQH S IP F QNR QA
Sbjct: 80 EQHSSAVIPMPHFDQNRLEQA 100
>AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical
protein Y105C5B.4 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 228 MVLGEHFPVMWGT------LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLI 389
M+ EH+ +W + +GI F L + G +TT + I G G PR K +
Sbjct: 127 MIFPEHYRKIWKSNKLWIGVGIQFLPGLGI-GCCTFFNTTEIYINGNGGIIPRFIDKQMT 185
Query: 390 SVIF 401
S F
Sbjct: 186 STFF 189
>AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical
protein F36F12.8 protein.
Length = 272
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 517 IRDVRRWTRCWLGEIYSVGICCWVSWGSGAALTDAAK 627
+RD R +LG++Y+ G C W ++ + ALT+ AK
Sbjct: 82 VRDHMR-NEHYLGQVYTCGCCNW-TFSNKKALTEHAK 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,665,101
Number of Sequences: 27780
Number of extensions: 415142
Number of successful extensions: 1715
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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