Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30394
(699 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 106 1e-23
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 105 2e-23
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 53 2e-07
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 53 2e-07
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 53 2e-07
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 53 2e-07
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 53 2e-07
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 32 0.32
At1g04300.1 68414.m00421 meprin and TRAF homology domain-contain... 32 0.32
At3g61280.1 68416.m06858 expressed protein ; expression supporte... 30 1.3
At3g48980.1 68416.m05350 expressed protein 29 2.2
At2g45840.1 68415.m05701 expressed protein 29 2.2
At2g45050.1 68415.m05608 zinc finger (GATA type) family protein ... 29 2.2
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 29 3.0
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 29 3.0
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi... 29 3.0
At1g35515.1 68414.m04409 myb family transcription factor (MYB8) ... 29 3.9
At1g31870.1 68414.m03917 expressed protein 29 3.9
At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-contain... 28 5.2
At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-contain... 28 5.2
At4g28110.1 68417.m04032 myb family transcription factor (MYB41)... 28 5.2
At5g66260.1 68418.m08354 auxin-responsive protein, putative GP:1... 28 6.8
At4g14980.1 68417.m02302 DC1 domain-containing protein contains ... 28 6.8
At3g62610.1 68416.m07033 myb family transcription factor similar... 28 6.8
At2g47460.1 68415.m05923 myb family transcription factor (MYB12)... 28 6.8
At1g77980.1 68414.m09087 MADS-box family protein MADS-box protei... 28 6.8
At4g21440.1 68417.m03099 myb family transcription factor (MYB102... 27 9.0
At4g05100.1 68417.m00758 myb family transcription factor (MYB74)... 27 9.0
At3g57030.1 68416.m06348 strictosidine synthase family protein s... 27 9.0
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 27 9.0
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 106 bits (255), Expect = 1e-23
Identities = 69/162 (42%), Positives = 96/162 (59%)
Frame = +3
Query: 207 G*ADKFGMVLGEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNL 386
G A +G L P + +GIA S+ +SV+GAA GI+ TG S++G ++APRI +KNL
Sbjct: 8 GHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNL 67
Query: 387 ISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQN*WRDT*CSALDSLLAW*NLF 566
ISVIFCEAVAIYG+I AI+L LE S P +S ++ A ++ + NL
Sbjct: 68 ISVIFCEAVAIYGVIVAIILQTKLE--SVP-SSKMYDAESLRAGYAIFASGIIVGFANLV 124
Query: 567 CGNLLLGIVGLWCCSNGCCQTLPWFVKILIG*KFLGSSIGSF 692
CG L +GI+G C + Q FVKIL+ + GS++G F
Sbjct: 125 CG-LCVGIIGSSCALSD-AQNSTLFVKILV-IEIFGSALGLF 163
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 105 bits (253), Expect = 2e-23
Identities = 68/160 (42%), Positives = 95/160 (59%)
Frame = +3
Query: 213 ADKFGMVLGEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLIS 392
A +G L P + +GIA S+ +SV+GAA GI+ TG S++G ++APRI +KNLIS
Sbjct: 8 ASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLIS 67
Query: 393 VIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQN*WRDT*CSALDSLLAW*NLFCG 572
VIFCEAVAIYG+I AI+L LE S P +S ++ A ++ + NL CG
Sbjct: 68 VIFCEAVAIYGVIVAIILQTKLE--SVP-SSKMYDAESLRAGYAIFASGIIVGFANLVCG 124
Query: 573 NLLLGIVGLWCCSNGCCQTLPWFVKILIG*KFLGSSIGSF 692
L +GI+G C + Q FVKIL+ + GS++G F
Sbjct: 125 -LCVGIIGSSCALSD-AQNSTLFVKILV-IEIFGSALGLF 161
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 237 GEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 416
G+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 6 GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 417 IYGLITAIVLS 449
IYGLI A+++S
Sbjct: 66 IYGLIIAVIIS 76
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L+ + A M I G + V + P++ ++ +IF EA+A+YGLI I+L
Sbjct: 95 LSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Query: 447 S 449
S
Sbjct: 155 S 155
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 237 GEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 416
G+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 6 GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 417 IYGLITAIVLS 449
IYGLI A+++S
Sbjct: 66 IYGLIIAVIIS 76
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L+ + A M I G + V + P++ ++ +IF EA+A+YGLI I+L
Sbjct: 95 LSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Query: 447 S 449
S
Sbjct: 155 S 155
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 237 GEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 416
G+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 6 GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 417 IYGLITAIVLS 449
IYGLI A+++S
Sbjct: 66 IYGLIIAVIIS 76
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L+ + A M I G + V + P++ ++ +IF EA+A+YGLI I+L
Sbjct: 95 LSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Query: 447 S 449
S
Sbjct: 155 S 155
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 237 GEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 416
G+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 8 GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 67
Query: 417 IYGLITAIVLS 449
IYGLI A+++S
Sbjct: 68 IYGLIIAVIIS 78
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L+ + A M I G + V + P++ ++ +IF EA+A+YGLI I+L
Sbjct: 97 LSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 156
Query: 447 S 449
S
Sbjct: 157 S 157
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 237 GEHFPVMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 416
G+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 7 GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 66
Query: 417 IYGLITAIVLS 449
IYGLI A+++S
Sbjct: 67 IYGLIIAVIIS 77
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 267 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 446
L + L+ + A M I G + V + P++ ++ +IF EA+A+YGLI I+L
Sbjct: 96 LSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 155
Query: 447 S 449
S
Sbjct: 156 S 156
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 32.3 bits (70), Expect = 0.32
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Frame = -2
Query: 464 FLQHTREHDSSDQTVNGD-GLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQG 288
+L + D D + D G +EDDG+ S S D D+G G
Sbjct: 124 YLGDVSDDDGEDSHSDHDLGASEDDGEDSHSDHDLGASDDDGEDSHSDHDLGARDDDGNG 183
Query: 287 NGKGDSEGTPHYGEVFSKNHPKLICSPFPLRT*Y 186
NG GD + NH K C PL+ Y
Sbjct: 184 NGAGDVHADGE-ASLSDGNHLKCKCCGVPLQMTY 216
>At1g04300.1 68414.m00421 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471;contains Pfam PF00917: Meprin And
TRAF-Homology (MATH) domain
Length = 1052
Score = 32.3 bits (70), Expect = 0.32
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = -2
Query: 440 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGT 261
D SD + + DG A+ IL D D+SS DT +++ H S G G+G S T
Sbjct: 490 DVSDISDSVDGSAD-----ILQPDLEDRDSSSVLWDTDALEIHPPSSEGSSRGRGISIST 544
Query: 260 PHYGEVFSKNH 228
P+ G K+H
Sbjct: 545 PN-GITEGKSH 554
>At3g61280.1 68416.m06858 expressed protein ; expression supported
by MPSS
Length = 338
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 49 GEKRPSLSGLTGKNSTKYLNQNLKMRYFLSYLFVLLVG 162
G + + G+ ++Y+ +NLKM+Y Y+ +L G
Sbjct: 211 GNNNTEKAQIIGRQGSEYMMKNLKMKYVYDYMLYVLQG 248
>At3g48980.1 68416.m05350 expressed protein
Length = 539
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 82 GKNSTKYLNQNLKMRYFLSYLFVLLV 159
GK +++++ Q LKM Y Y+F LL+
Sbjct: 423 GKKASEFVQQELKMDYVYDYMFHLLI 448
>At2g45840.1 68415.m05701 expressed protein
Length = 523
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 82 GKNSTKYLNQNLKMRYFLSYLFVLL 156
G+N + Y+ +NLKM+Y Y+ LL
Sbjct: 405 GRNGSGYVRKNLKMKYVYDYMLHLL 429
>At2g45050.1 68415.m05608 zinc finger (GATA type) family protein
identical to cDNA GATA transcription factor 2 GI:2959731
Length = 264
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -3
Query: 571 PQN-RFHQANSESSAEHHVSRHQFCCLTDTLVNGSEYFSSIPESTIA--VIKP*MATASQ 401
PQN FH + SSA+HH H C +D + E+ S + + A P T +
Sbjct: 46 PQNPSFHHHHLPSSADHHSFLHDICVPSDDAAH-LEWLSQFVDDSFADFPANPLGGTMTS 104
Query: 400 KMTEIKF 380
TE F
Sbjct: 105 VKTETSF 111
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = -2
Query: 683 NGRSQKFSTDEDLDEPRQRLAASVRAAPEPHDTQQQIPTE*ISPSQQRVQRRTSRIPPSV 504
+G S+++S DEDLDE + S++ + E S++R Q +TS + V
Sbjct: 195 SGSSREYSDDEDLDEENE-TTGSLKPEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQV 253
Query: 503 LLLDGHTSKWFRIFLQHTREHDSS 432
L G S + ++D +
Sbjct: 254 NDLKGEHSSLLKQLSNMNHKYDEA 277
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = -2
Query: 683 NGRSQKFSTDEDLDEPRQRLAASVRAAPEPHDTQQQIPTE*ISPSQQRVQRRTSRIPPSV 504
+G S+++S DEDLDE + S++ + E S++R Q +TS + V
Sbjct: 189 SGSSREYSDDEDLDEENE-TTGSLKPEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQV 247
Query: 503 LLLDGHTSKWFRIFLQHTREHDSS 432
L G S + ++D +
Sbjct: 248 NDLKGEHSSLLKQLSNMNHKYDEA 271
>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
to CREB-binding protein GB:AAC51770 GI:2443859 from
[Homo sapiens]; contains Pfam PF02135: TAZ zinc finger
profile; contains Pfam PF00569: Zinc finger, ZZ type
domain; identical to histone acetyltransferase HAC4
(GI:14794966) {Arabidopsis thaliana}
Length = 1456
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/93 (21%), Positives = 35/93 (37%)
Frame = -3
Query: 667 NFQPMRILTNQGSVWQHPLEQHQSPTIPNSKFPQNRFHQANSESSAEHHVSRHQFCCLTD 488
N QPM+ HPL + PN++ + Q S + H +H
Sbjct: 321 NLQPMQQTPLPKRQLHHPLWNTNFQSAPNNRDNLPQVSQQLSNHGSRQHRGQHSQNLYPG 380
Query: 487 TLVNGSEYFSSIPESTIAVIKP*MATASQKMTE 389
L N ++ + +A+ P M S+++ E
Sbjct: 381 QLQNQDRLLPNLTQQAMALAAPVMHVPSKQVNE 413
>At1g35515.1 68414.m04409 myb family transcription factor (MYB8)
similar to DNA-binding protein GB:AAA98761 GI:1020155
from [Arabidopsis thaliana]
Length = 212
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 227 DGSWRTLPRNVGYPRNRLFRCPVRCR 304
+GSWR+LP++VG L RC CR
Sbjct: 34 EGSWRSLPKSVG-----LLRCGKSCR 54
>At1g31870.1 68414.m03917 expressed protein
Length = 561
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -2
Query: 686 PNGRSQK-FSTDEDLDEPRQRLAASVRAAPEPHDTQQQIPTE*ISPSQQRVQRRTSR 519
PN + K S D D+ PR+R A + +PEP + + +E +SP ++R SR
Sbjct: 163 PNRKHTKPVSLDSDMSPPRKRKARNDSPSPEP---EAKYLSEDLSPPRRRHVHSPSR 216
>At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 870
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -3
Query: 286 TEKAIPRVPHITGKCSPRTIPNLSAHPFH*GRSTAKISGLQV-PPGARISNLRS 128
TE PH+ G C + L + P TA + ++ ARIS+LRS
Sbjct: 218 TEFTFDEDPHVVGDCIKHVLRELPSSPVSASCCTALLEAYRIESKEARISSLRS 271
>At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 822
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -3
Query: 286 TEKAIPRVPHITGKCSPRTIPNLSAHPFH*GRSTAKISGLQV-PPGARISNLRS 128
TE PH+ G C + L + P TA + ++ ARIS+LRS
Sbjct: 218 TEFTFDEDPHVVGDCIKHVLRELPSSPVSASCCTALLEAYRIESKEARISSLRS 271
>At4g28110.1 68417.m04032 myb family transcription factor (MYB41)
contains PFAM profile: myb DNA binding protein PF00249
Length = 282
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 230 GSWRTLPRNVGYPRNRLFRCPVRCR 304
G+WRTLP+N G L RC CR
Sbjct: 35 GNWRTLPKNAG-----LHRCGKSCR 54
>At5g66260.1 68418.m08354 auxin-responsive protein, putative
GP:10185816 auxin-induced protein TGSAUR12 {Tulipa
gesneriana)
Length = 99
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 586 VSWGSGAALTDAAKRCLGSSRSSSVE-NFWDLPLGLF 693
V GSG L KRC + SSV+ NF +P G F
Sbjct: 3 VERGSGKGLKQMLKRCSSLGKKSSVDVNFNGVPKGHF 39
>At4g14980.1 68417.m02302 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 470
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 311 HGHPHYWCQHSGRRCQS 361
H HP YW S +RCQ+
Sbjct: 308 HPHPLYWTLESSKRCQA 324
>At3g62610.1 68416.m07033 myb family transcription factor similar to
myb-like transcription factor GI:168590 from [Zea mays]
Length = 343
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 227 DGSWRTLPRNVGYPRNRLFRCPVRCR 304
+GSWR+LP+N G L RC CR
Sbjct: 34 EGSWRSLPKNAG-----LKRCGKSCR 54
>At2g47460.1 68415.m05923 myb family transcription factor (MYB12)
similar to myb-related DNA-binding protein GI:1020155
from [Arabidopsis thaliana]
Length = 371
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 227 DGSWRTLPRNVGYPRNRLFRCPVRCR 304
+GSWR+LP+N G L RC CR
Sbjct: 34 EGSWRSLPKNAG-----LKRCGKSCR 54
>At1g77980.1 68414.m09087 MADS-box family protein MADS-box protein
AGL66
Length = 332
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -2
Query: 371 DSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHYGEVFSK 234
++ FD S+H A ++ S + Q N G+S + H G++F +
Sbjct: 224 EAHLFDASAHSAMYETLLQGSSSSSNQNNIMGESNVSNHNGDMFQE 269
>At4g21440.1 68417.m03099 myb family transcription factor (MYB102)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 350
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 230 GSWRTLPRNVGYPRNRLFRCPVRCR 304
G+WRTLP+N G L RC CR
Sbjct: 35 GNWRTLPKNAG-----LQRCGKSCR 54
>At4g05100.1 68417.m00758 myb family transcription factor (MYB74)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA putative transcription
factor (MYB74) mRNA, partial cds GI:3941505
Length = 324
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 230 GSWRTLPRNVGYPRNRLFRCPVRCR 304
G+WRTLP+N G L RC CR
Sbjct: 36 GNWRTLPKNAG-----LQRCGKSCR 55
>At3g57030.1 68416.m06348 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]
Length = 374
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = -2
Query: 131 KYLILRFWLRYLVLFLPVNPER-DGLFS---PDFCLDKKTQNGEVL 6
K + + W R LVL LP++P+R LF+ P K +++G+VL
Sbjct: 290 KLSLTQTWFRDLVLRLPISPQRLHSLFTGGIPHATAIKLSESGKVL 335
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase
family protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = +1
Query: 547 WLGEIYS-VGICCW----VSWGSGAALTDAAKRCLGSSRSSSVENFW 672
WLG + S VGI V G+G AAK +G + S++ +W
Sbjct: 598 WLGSVASDVGILVVGLQEVEMGAGFLAMSAAKESVGGNEGSTIGQYW 644
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,989,611
Number of Sequences: 28952
Number of extensions: 397578
Number of successful extensions: 1489
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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