Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30393
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 164 9e-42
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 164 1e-41
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 164 1e-41
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 97 2e-21
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 94 2e-20
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 73 4e-14
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 37 0.002
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.007
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.007
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 35 0.013
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.030
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.16
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.21
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 30 0.37
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.48
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 2.0
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.6
SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 26 4.5
SPBC1734.14c |suc1||cyclin-dependent protein kinase regulatory s... 26 4.5
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 26 6.0
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 7.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 164 bits (399), Expect = 9e-42
Identities = 85/129 (65%), Positives = 97/129 (75%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRNQEGSILIHQEDWLQPSCCRFRGP 614
TREHALLA+TLGVKQLIV VNKMD+ + +E S I + + P F P
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTGWSQARFEEIVKETSNFIKKVGF-NPKTVPF-VP 190
Query: 615 ILGWPGDNI 641
+ G+ GDN+
Sbjct: 191 VSGFQGDNM 199
Score = 140 bits (338), Expect = 2e-34
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERD 244
DKLKAER+
Sbjct: 61 DKLKAERE 68
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 164 bits (398), Expect = 1e-41
Identities = 84/129 (65%), Positives = 97/129 (75%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRNQEGSILIHQEDWLQPSCCRFRGP 614
TREHALLA+TLGVKQLIV VNKMD+ + +E S I + + P F P
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTGWSQARFEEIVKETSNFIKKVGF-NPKTVPF-VP 190
Query: 615 ILGWPGDNI 641
+ G+ GDN+
Sbjct: 191 VSGFQGDNM 199
Score = 140 bits (338), Expect = 2e-34
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERD 244
DKLKAER+
Sbjct: 61 DKLKAERE 68
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 164 bits (398), Expect = 1e-41
Identities = 84/129 (65%), Positives = 97/129 (75%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRNQEGSILIHQEDWLQPSCCRFRGP 614
TREHALLA+TLGVKQLIV VNKMD+ + +E S I + + P F P
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTGWSQARFEEIVKETSNFIKKVGF-NPKTVPF-VP 190
Query: 615 ILGWPGDNI 641
+ G+ GDN+
Sbjct: 191 VSGFQGDNM 199
Score = 140 bits (338), Expect = 2e-34
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERD 244
DKLKAER+
Sbjct: 61 DKLKAERE 68
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 97.1 bits (231), Expect = 2e-21
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQ
Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQ 363
Query: 435 TREHALLAFTLGVKQLIVGVNKMD 506
TREHA+LA T G+ L+V +NKMD
Sbjct: 364 TREHAVLARTQGINHLVVVINKMD 387
Score = 79.4 bits (187), Expect = 5e-16
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 232
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 233 AERD 244
ER+
Sbjct: 296 EERE 299
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 93.9 bits (223), Expect = 2e-20
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQ
Sbjct: 243 MDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQ 302
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLN 515
TREHA L LG+ +++V VNK+D ++
Sbjct: 303 TREHAYLLRALGISEIVVSVNKLDLMS 329
Score = 72.5 bits (170), Expect = 5e-14
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 232
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 233 AER 241
ER
Sbjct: 235 EER 237
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 72.9 bits (171), Expect = 4e-14
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +3
Query: 273 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 452
++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 453 LAFTLGVKQLIVGVNKMD 506
LA +GVKQ++V +NK+D
Sbjct: 163 LARQVGVKQIVVYINKVD 180
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 133
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 294 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 473
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 474 KQLIVGVNKMD 506
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 386
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 386
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.7 bits (76), Expect = 0.013
Identities = 29/104 (27%), Positives = 44/104 (42%)
Frame = +3
Query: 276 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 455
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R + +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRYNVP 199
Query: 456 AFTLGVKQLIVGVNKMDSLNHHTVSPDLRNQEGSILIHQEDWLQ 587
+ K +G + + + I I QED L+
Sbjct: 200 RISFVNKMDRMGADPWKVIQQINTKLKIPAAAVQIPIGQEDKLE 243
Score = 29.1 bits (62), Expect = 0.64
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGI 142
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.030
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 276 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 31.1 bits (67), Expect = 0.16
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +3
Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 470
Y + +ID+PGH DF + + + D A ++V A G I+ Q A+
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQ-------AWIDR 146
Query: 471 VKQLIVGVNKMDSL 512
+K ++V +NKMD L
Sbjct: 147 IKVILV-INKMDRL 159
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.21
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 267 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 29.9 bits (64), Expect = 0.37
Identities = 26/84 (30%), Positives = 38/84 (45%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
I+ A F + +ID PGH DF + + D AV I+ + AG+ Q
Sbjct: 81 INSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQ 133
Query: 435 TREHALLAFTLGVKQLIVGVNKMD 506
T+ A G+ ++I VNKMD
Sbjct: 134 TKVVWKQATKRGIPKVIF-VNKMD 156
Score = 28.7 bits (61), Expect = 0.85
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCG 136
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 303 IIDAPGHRDFIKNMITGTSQADCAVLIV 386
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = -2
Query: 284 SFELPESNIDVIPSHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWW 105
S L N D ++ V +PK I I++ F P S S C+Y S D W
Sbjct: 12 SSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71
Query: 104 WT 99
T
Sbjct: 72 RT 73
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 234 LSVTWYHIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 386
+S+ + +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 190 MSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 716
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 556 VSSYIKKIGYNPAAVAFVAP 615
V +Y+K +G NP V F AP
Sbjct: 155 VQTYLKSVGVNPIIVDFSAP 174
>SPBC1734.14c |suc1||cyclin-dependent protein kinase regulatory
subunit Suc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 113
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 464 PRCQTAHRRSKQNGFTEPPYSEPRFEESRREYPH 565
PR TA R + F + + PR+ + EY H
Sbjct: 7 PRLLTASERERLEPFIDQIHYSPRYADDEYEYRH 40
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 25.8 bits (54), Expect = 6.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -2
Query: 263 NIDVIPSHAQPLVCPIPKH 207
N+D++ HA P++C + H
Sbjct: 531 NVDLLHLHAYPVICSVSSH 549
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 255 IDIALWKFETSKYYV--TIIDAPGHRDFIKN 341
I+I + E +++ T+ID PG DFI N
Sbjct: 73 IEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,972,424
Number of Sequences: 5004
Number of extensions: 63331
Number of successful extensions: 239
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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