Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30393
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 186 2e-49
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 186 2e-49
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 184 7e-49
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 178 5e-47
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 36 3e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.7
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 4.9
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 6.4
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 186 bits (452), Expect = 2e-49
Identities = 100/145 (68%), Positives = 109/145 (75%), Gaps = 3/145 (2%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 16 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 75
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLN---HHTVSPDLRNQEGSILIHQEDWLQPSCCRF 605
TREHALLAFTLGVKQLIVGVNKMDS T +++ + S + ++ P+ F
Sbjct: 76 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYI--KKIGYNPAAVAF 133
Query: 606 RGPILGWPGDNIFGAFKPKCLGFKG 680
PI GW GDN+ K FKG
Sbjct: 134 -VPISGWHGDNML-EVSSKMPWFKG 156
Score = 26.2 bits (55), Expect = 0.30
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 212 WVLDKLKAERD 244
WVLDKLKAER+
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 186 bits (452), Expect = 2e-49
Identities = 100/145 (68%), Positives = 109/145 (75%), Gaps = 3/145 (2%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 73 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLN---HHTVSPDLRNQEGSILIHQEDWLQPSCCRF 605
TREHALLAFTLGVKQLIVGVNKMDS T +++ + S + ++ P+ F
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYI--KKIGYNPAAVAF 190
Query: 606 RGPILGWPGDNIFGAFKPKCLGFKG 680
PI GW GDN+ K FKG
Sbjct: 191 -VPISGWHGDNML-EVSSKMPWFKG 213
Score = 144 bits (349), Expect = 7e-37
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 221 DKLKAERD 244
DKLKAER+
Sbjct: 61 DKLKAERE 68
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 184 bits (448), Expect = 7e-49
Identities = 99/144 (68%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
Frame = +3
Query: 258 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 437
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 438 REHALLAFTLGVKQLIVGVNKMDSLN---HHTVSPDLRNQEGSILIHQEDWLQPSCCRFR 608
REHALLAFTLGVKQLIVGVNKMDS T +++ + S + ++ P+ F
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYI--KKIGYNPAAVAF- 117
Query: 609 GPILGWPGDNIFGAFKPKCLGFKG 680
PI GW GDN+ K FKG
Sbjct: 118 VPISGWHGDNML-EVSSKMPWFKG 140
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 178 bits (433), Expect = 5e-47
Identities = 97/144 (67%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Frame = +3
Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434
IDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQ
Sbjct: 73 IDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQ 132
Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLN--HHTVSPDLRNQEGSILIHQEDWLQPSCCRFR 608
TREHALLAFTLGVKQLIVGVNKMD + + + +E S I + + S
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFV- 191
Query: 609 GPILGWPGDNIFGAFKPKCLGFKG 680
PI GW GDN+ PK +KG
Sbjct: 192 -PISGWHGDNMLEP-SPKTPWYKG 213
Score = 144 bits (349), Expect = 7e-37
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 221 DKLKAERD 244
DKLKAER+
Sbjct: 61 DKLKAERE 68
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 36.3 bits (80), Expect = 3e-04
Identities = 29/92 (31%), Positives = 40/92 (43%)
Frame = +3
Query: 297 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 476
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 477 QLIVGVNKMDSLNHHTVSPDLRNQEGSILIHQ 572
+IV +NK+D N + + I+I +
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGIVIEE 278
Score = 25.4 bits (53), Expect = 0.52
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKST 106
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 62 INIVVIGHVDSGKST 106
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 54 FSLPIFG*SRITNCV*Y 4
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 282 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 383
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 282 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 383
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 296 IVLASFELPESNIDVIPSHAQPLVCPIPKHI*RILY 189
IV+ FE+ +S D + A IP ++ R+L+
Sbjct: 54 IVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLH 89
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +2
Query: 470 CQTAHRRSKQNGFTEPPYSEPRFEESRREYPHTS 571
C ++ K + E Y + F+E+ R YP S
Sbjct: 338 CPKNNKELKYDDIKEMEYLDKVFKETLRMYPPAS 371
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,886
Number of Sequences: 438
Number of extensions: 4427
Number of successful extensions: 35
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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