Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30391
(726 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQ40 Cluster: Syntaxin 5A; n=1; Bombyx mori|Rep: Synt... 181 2e-44
UniRef50_Q16IW0 Cluster: Syntaxin; n=1; Aedes aegypti|Rep: Synta... 50 6e-05
UniRef50_Q24509 Cluster: Syntaxin-5; n=8; Eumetazoa|Rep: Syntaxi... 44 0.004
UniRef50_Q9MAI3 Cluster: F12M16.8; n=2; Arabidopsis thaliana|Rep... 35 2.4
UniRef50_A5FWU6 Cluster: Diguanylate cyclase/phosphodiesterase; ... 34 4.1
UniRef50_A4AVD5 Cluster: Beta-lactamase; n=2; Bacteroidetes|Rep:... 33 7.2
UniRef50_Q6D2C7 Cluster: Magnesium transporter; n=19; Gammaprote... 33 9.5
UniRef50_A0EG91 Cluster: Chromosome undetermined scaffold_95, wh... 33 9.5
>UniRef50_Q1HQ40 Cluster: Syntaxin 5A; n=1; Bombyx mori|Rep:
Syntaxin 5A - Bombyx mori (Silk moth)
Length = 356
Score = 181 bits (440), Expect = 2e-44
Identities = 93/113 (82%), Positives = 96/113 (84%)
Frame = +3
Query: 255 KLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVMASRDRTSEFISTV 434
KLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVMASRDRTSEFISTV
Sbjct: 24 KLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVMASRDRTSEFISTV 83
Query: 435 RSLQGRFLNKPTVRDDRKAAVLETYPNS*VWQK*LVRILLVHIPNWEKLALLA 593
RSLQGRFLNKPTVRDDRKAAVLETY K + + + EKLALLA
Sbjct: 84 RSLQGRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITSTYTKLEKLALLA 136
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 187 MLPRRRNIGVTERLLETETDSY 252
MLPRRRNIGVTERLLETETDSY
Sbjct: 1 MLPRRRNIGVTERLLETETDSY 22
>UniRef50_Q16IW0 Cluster: Syntaxin; n=1; Aedes aegypti|Rep: Syntaxin
- Aedes aegypti (Yellowfever mosquito)
Length = 291
Score = 50.0 bits (114), Expect = 6e-05
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 384 EPVMASRDRTSEFISTVRSLQGRFLNKP-TVRDDRKAAVLETYPNS*VWQK*LVRILLVH 560
E +MASRDR++EF + +RSLQGR + + VRD RKA L++Y + K + + +
Sbjct: 100 EFIMASRDRSTEFANAIRSLQGRNIQRAVNVRDPRKAKQLQSYSEFTMIAKHIGKNIAST 159
Query: 561 IPNWEKLALLA 593
EKL LLA
Sbjct: 160 YAKLEKLTLLA 170
>UniRef50_Q24509 Cluster: Syntaxin-5; n=8; Eumetazoa|Rep: Syntaxin-5
- Drosophila melanogaster (Fruit fly)
Length = 467
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +3
Query: 390 VMASRDRTSEFISTVRSLQGRFLNKP-TVRDDRKAAVLETYPNS*VWQK*LVRILLVHIP 566
VMA+RDRT EF + +RSLQ R + + +RD RKA +++Y + + + + +
Sbjct: 157 VMAARDRTGEFANAIRSLQARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 216
Query: 567 NWEKLALLA 593
EKL +LA
Sbjct: 217 KLEKLTMLA 225
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +2
Query: 497 VGNLSQFMSMAKVISKNITSTYTKLGKVSLVG*EENHYLMTVPPENSKN*PYII 658
V + S+FM +A+ I KNI STY KL K++++ +++ L P+ + YII
Sbjct: 194 VQSYSEFMMVARFIGKNIASTYAKLEKLTMLAKKKS--LFDDRPQEIQELTYII 245
>UniRef50_Q9MAI3 Cluster: F12M16.8; n=2; Arabidopsis thaliana|Rep:
F12M16.8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 457
Score = 34.7 bits (76), Expect = 2.4
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +3
Query: 267 KGVHYGESRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVMASRDRTSEFISTVRSLQ 446
+G+ Y S PY +SS S ST K D D+ K LE ++ + S + L
Sbjct: 129 RGLRYCHSDPYPSSS-STSTSPEKMGDSDIGKVLEASTGRSLIRASSIDSREGGSQTKLT 187
Query: 447 GRFLNKPTVRDDRK 488
GRF K V++ R+
Sbjct: 188 GRFSEKIRVQEQRQ 201
>UniRef50_A5FWU6 Cluster: Diguanylate cyclase/phosphodiesterase;
n=1; Acidiphilium cryptum JF-5|Rep: Diguanylate
cyclase/phosphodiesterase - Acidiphilium cryptum (strain
JF-5)
Length = 809
Score = 33.9 bits (74), Expect = 4.1
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = -3
Query: 709 P*VWANLADLKNLKPPLNNIRLVLGIFWGDGHQIMIFLLANKANFSQFGICTSNILTNYF 530
P + +AD K N + LG+FW + +++ ++ AN + +I+
Sbjct: 113 PVIRRRIADFGRAKAAFNRLIFALGVFWAT-YLVLLMRASDSANQA----LLLSIMIGLI 167
Query: 529 CHTHELG*VSNTAAFLSSLTVGLF 458
T G +S+T +F + LTVG F
Sbjct: 168 STTISAGPLSSTLSFWAPLTVGAF 191
>UniRef50_A4AVD5 Cluster: Beta-lactamase; n=2; Bacteroidetes|Rep:
Beta-lactamase - Flavobacteriales bacterium HTCC2170
Length = 413
Score = 33.1 bits (72), Expect = 7.2
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 195 SKAKYRRYRKTLGNRNGFIQKLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVFKFLEE 374
+KA Y ++ + +R + L G H GE Y S + + +I K S Q + KFL+E
Sbjct: 180 AKALYYEPQENIESRVNTLASLPLVG-HPGEQWYYSASPDVLALMIEKISGQSLDKFLDE 238
Query: 375 FVFEPV 392
+F+P+
Sbjct: 239 RIFKPL 244
>UniRef50_Q6D2C7 Cluster: Magnesium transporter; n=19;
Gammaproteobacteria|Rep: Magnesium transporter - Erwinia
carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 492
Score = 32.7 bits (71), Expect = 9.5
Identities = 22/92 (23%), Positives = 36/92 (39%)
Frame = +3
Query: 204 KYRRYRKTLGNRNGFIQKLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVFKFLEEFVF 383
+Y RYRK + N + D+K GE +S L+ D +F E
Sbjct: 200 RYLRYRKKIPNSTDKLFVTDRKNTLIGELSLANILLHSPQALVTDVMDAQPLRFQPEDKV 259
Query: 384 EPVMASRDRTSEFISTVRSLQGRFLNKPTVRD 479
E + +R S V +G+ + + T+ D
Sbjct: 260 EEAAGAFERYDLISSAVVDSKGKLMGRLTIED 291
>UniRef50_A0EG91 Cluster: Chromosome undetermined scaffold_95, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_95, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1384
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 128 FHSTFMCVQYLSFHLIDSFQNSMIYLSFKLSSPTIPFFR 12
F S+ C+ YL+FH+I NS I S++L P + F R
Sbjct: 897 FKSSTQCINYLNFHII---FNSFIQKSYQLHKPELKFQR 932
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,815,599
Number of Sequences: 1657284
Number of extensions: 12000812
Number of successful extensions: 25916
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25907
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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