Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30391
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.7  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +3

Query: 213 RYRKTLGNRN-GFIQKLDK 266
           R+ + LGNR  GF+Q+LD+
Sbjct: 188 RFFEKLGNRRLGFVQRLDQ 206


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +3

Query: 213 RYRKTLGNRN-GFIQKLDK 266
           R+ + LGNR  GF+Q+LD+
Sbjct: 188 RFFEKLGNRRLGFVQRLDQ 206


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 558 VLVIFLLITFAILMNWDKFPTQQLF 484
           +++IF LI FA+L+ +       LF
Sbjct: 44  IVIIFHLILFAVLLYFASLEKNPLF 68


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 683 FKEFKAPFK*YKVSSWNFLGGRSSN 609
           F+EFKA    Y V+  N+ G   +N
Sbjct: 410 FQEFKATLPRYTVAQLNYPGVTVTN 434


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 173 SVFT*KTN-SVQIITYFHSTFMCVQYLSFHLIDSF 72
           +++T   N S  ++ Y HS      Y SF+  D F
Sbjct: 102 TIYTTHVNASFDVVVYIHSGAFMTGYGSFYQPDYF 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,526
Number of Sequences: 336
Number of extensions: 3288
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)