Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30391
         (726 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0521 + 4083594-4083763,4083765-4083963,4084059-4084244,408...    28   8.7  
03_02_0726 + 10722759-10722857,10722969-10723058,10723141-107232...    28   8.7  

>11_01_0521 +
           4083594-4083763,4083765-4083963,4084059-4084244,
           4085834-4086025,4086979-4087200,4089238-4089444,
           4089681-4090082,4090201-4090230,4090307-4090318
          Length = 539

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 588 TRLTFPNLVYVLVIFLLITFAILMNWDKF 502
           TRL F   V +L IFL++   +L+ W  F
Sbjct: 493 TRLQFYATVILLAIFLIVVLTMLIVWGSF 521


>03_02_0726 +
           10722759-10722857,10722969-10723058,10723141-10723245,
           10723597-10723698,10724721-10724805,10725281-10725365,
           10725473-10725517,10725685-10728672,10728839-10729055,
           10729193-10729765
          Length = 1462

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 490 LLCWKLIPIHEYGKSN 537
           L CWK++P+ +Y KS+
Sbjct: 190 LKCWKILPVDDYSKSS 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,825,565
Number of Sequences: 37544
Number of extensions: 304618
Number of successful extensions: 567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)