Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30390
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    29   0.023
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    27   0.16 
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    27   0.16 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.5  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 0.023
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +3

Query: 3   FNGKELNKSINPDE 44
           F+GKELN+ INPDE
Sbjct: 181 FDGKELNRGINPDE 194


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 3   FNGKELNKSINPDE 44
           FNGKE  +SINPDE
Sbjct: 182 FNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 3   FNGKELNKSINPDE 44
           FNGKE  +SINPDE
Sbjct: 182 FNGKEPCRSINPDE 195


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 317 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNK 433
           +   G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,794
Number of Sequences: 336
Number of extensions: 2599
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)