Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30389
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    25   0.82 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.8  

>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 312 QRRCRSGESPPEPLGR 359
           Q +C +GE+P +P+GR
Sbjct: 48  QLKCATGEAPCDPVGR 63


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 689 CPNGKLSLGN 718
           CP+GKLS GN
Sbjct: 109 CPDGKLSCGN 118


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 689 CPNGKLSLGN 718
           CP+GKLS GN
Sbjct: 116 CPDGKLSCGN 125


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 269 WLESNSRYRRIKTSGSSQWRRLQQTEAQSFHW 174
           WL+SNS     + + S Q      T+  SF++
Sbjct: 13  WLKSNSSLAGFEVNSSEQLTTPTPTDINSFYF 44


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 99  TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYS 242
           ++PRS      SS +     S  S+   ++  RLL  +P+      YS
Sbjct: 152 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYS 199


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 99  TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYS 242
           ++PRS      SS +     S  S+   ++  RLL  +P+      YS
Sbjct: 143 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYS 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,518
Number of Sequences: 336
Number of extensions: 3457
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)