Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30383
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.24 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.72 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 454 FWISIAPRYSHFQNLIDGLYV*LFWIPWFLFRPHSALFPKLHQI 323
           FWI +AP  S+F+   +  Y  + +    +F  +SA+ P L+ I
Sbjct: 313 FWIIVAPAGSNFEIGFENYYN-ILYFSRIMFHINSAVNPILYNI 355


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 310 DKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
           DK+K   ++    ++EDE   KE K+ K+
Sbjct: 239 DKDKDKPKIEDVGEDEDEDTKKEDKKKKK 267


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 658 RKPNPTNDSFFPG 620
           R+ +PTND + PG
Sbjct: 373 RREDPTNDEYLPG 385


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +2

Query: 161 PPPEPFNDGKTQSDHTDDEEKEDIVNIP 244
           PPP P  D  +     + + K+   N+P
Sbjct: 214 PPPPPEEDDDSNIPQNNPKNKQHNFNLP 241


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/22 (31%), Positives = 17/22 (77%)
 Frame = -2

Query: 360 VLILLFSRNFIRFLIFVNFMSS 295
           +L+L+F+ +FI  ++ + +MS+
Sbjct: 236 ILLLMFTSHFIFIVVSIFYMSA 257


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 328 DEVSGKEQNEDEIKTKESKRAKR 396
           DE+SGK  N+ E   ++S R  +
Sbjct: 170 DELSGKSDNDAEEYDEQSLRVPK 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,726
Number of Sequences: 336
Number of extensions: 2289
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)