Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30383
(658 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113195-1|AAM29200.1| 576|Drosophila melanogaster AT02481p pro... 33 0.34
AE014298-2467|AAF48658.2| 575|Drosophila melanogaster CG32572-P... 33 0.45
BT004839-1|AAO45195.1| 311|Drosophila melanogaster RH24769p pro... 30 3.2
AY314744-1|AAP79432.1| 311|Drosophila melanogaster nervana 3 pr... 30 3.2
AF202633-1|AAF17587.1| 311|Drosophila melanogaster Na/K-ATPase ... 30 3.2
AE014134-3399|AAN11122.1| 311|Drosophila melanogaster CG8663-PD... 30 3.2
AE014134-3398|AAN11121.1| 311|Drosophila melanogaster CG8663-PC... 30 3.2
AE014134-3397|AAF53996.1| 311|Drosophila melanogaster CG8663-PB... 30 3.2
AE014134-3396|AAF53995.1| 311|Drosophila melanogaster CG8663-PA... 30 3.2
BT015197-1|AAT94426.1| 954|Drosophila melanogaster RE71183p pro... 29 4.2
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 29 4.2
AE014134-3170|AAF53851.2| 538|Drosophila melanogaster CG10481-P... 29 5.6
AY061596-1|AAL29144.1| 751|Drosophila melanogaster SD04745p pro... 29 7.3
AE014297-2765|AAF55743.2| 676|Drosophila melanogaster CG10887-P... 29 7.3
AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-P... 29 7.3
AE013599-1475|AAX52710.1| 1089|Drosophila melanogaster CG30048-P... 29 7.3
AE013599-1474|AAM68678.3| 1243|Drosophila melanogaster CG30048-P... 29 7.3
BT030404-1|ABO52823.1| 971|Drosophila melanogaster FI01202p pro... 28 9.7
BT029949-1|ABM92823.1| 310|Drosophila melanogaster IP17161p pro... 28 9.7
BT029942-1|ABM92816.1| 310|Drosophila melanogaster IP16861p pro... 28 9.7
BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p pro... 28 9.7
BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p pro... 28 9.7
AY060361-1|AAL25400.1| 667|Drosophila melanogaster LD04789p pro... 28 9.7
AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant ... 28 9.7
AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein. 28 9.7
AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide e... 28 9.7
AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair e... 28 9.7
AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA... 28 9.7
AE014297-3135|AAF55980.2| 744|Drosophila melanogaster CG7069-PA... 28 9.7
AE014297-2361|AAS65164.1| 2046|Drosophila melanogaster CG31190-P... 28 9.7
AE014297-2360|AAF55426.2| 2008|Drosophila melanogaster CG31190-P... 28 9.7
AE014297-109|AAF52120.1| 701|Drosophila melanogaster CG1078-PA ... 28 9.7
AE014296-2551|AAF49605.2| 971|Drosophila melanogaster CG7372-PA... 28 9.7
AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-P... 28 9.7
AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-P... 28 9.7
AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-P... 28 9.7
>AY113195-1|AAM29200.1| 576|Drosophila melanogaster AT02481p
protein.
Length = 576
Score = 33.1 bits (72), Expect = 0.34
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 356 RTK*KPRNPKELNVKPINQILKVRVARSYRNPKVSPKSSVRRRVHLREIRNQK 514
R + +NP+E +V+P Q+L RV ++ NP + RR + RNQ+
Sbjct: 85 RVRQDQKNPRESSVRPTRQVLSARVL-AHSNPYTVKQPPKERRSGTQRTRNQQ 136
>AE014298-2467|AAF48658.2| 575|Drosophila melanogaster CG32572-PA
protein.
Length = 575
Score = 32.7 bits (71), Expect = 0.45
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 374 RNPKELNVKPINQILKVRVARSYRNPKVSPKSSVRRRVHLREIRNQK 514
+NP+E +V+P Q+L RV ++ NP + RR + RNQ+
Sbjct: 91 KNPRESSVRPTRQVLSARVL-AHSNPYTVKQPPKERRSGTQRTRNQQ 136
>BT004839-1|AAO45195.1| 311|Drosophila melanogaster RH24769p
protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 167 PEPFNDGKTQSDHTDDEEKEDIVNIPNLR--DTQKVFHALHHRSCEDMKLTKIRN 325
PE +ND KT DH +E K+ I +LR +T V+ + + D++ K R+
Sbjct: 191 PEIYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARD 245
>AY314744-1|AAP79432.1| 311|Drosophila melanogaster nervana 3
protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 167 PEPFNDGKTQSDHTDDEEKEDIVNIPNLR--DTQKVFHALHHRSCEDMKLTKIRN 325
PE +ND KT DH +E K+ I +LR +T V+ + + D++ K R+
Sbjct: 191 PEIYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARD 245
>AF202633-1|AAF17587.1| 311|Drosophila melanogaster Na/K-ATPase
beta subunit isoform 3 protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 167 PEPFNDGKTQSDHTDDEEKEDIVNIPNLR--DTQKVFHALHHRSCEDMKLTKIRN 325
PE +ND KT DH +E K+ I +LR +T V+ + + D++ K R+
Sbjct: 191 PEIYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARD 245
>AE014134-3399|AAN11122.1| 311|Drosophila melanogaster CG8663-PD,
isoform D protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 167 PEPFNDGKTQSDHTDDEEKEDIVNIPNLR--DTQKVFHALHHRSCEDMKLTKIRN 325
PE +ND KT DH +E K+ I +LR +T V+ + + D++ K R+
Sbjct: 191 PEIYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARD 245
>AE014134-3398|AAN11121.1| 311|Drosophila melanogaster CG8663-PC,
isoform C protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 167 PEPFNDGKTQSDHTDDEEKEDIVNIPNLR--DTQKVFHALHHRSCEDMKLTKIRN 325
PE +ND KT DH +E K+ I +LR +T V+ + + D++ K R+
Sbjct: 191 PEIYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARD 245
>AE014134-3397|AAF53996.1| 311|Drosophila melanogaster CG8663-PB,
isoform B protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 167 PEPFNDGKTQSDHTDDEEKEDIVNIPNLR--DTQKVFHALHHRSCEDMKLTKIRN 325
PE +ND KT DH +E K+ I +LR +T V+ + + D++ K R+
Sbjct: 191 PEIYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARD 245
>AE014134-3396|AAF53995.1| 311|Drosophila melanogaster CG8663-PA,
isoform A protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 167 PEPFNDGKTQSDHTDDEEKEDIVNIPNLR--DTQKVFHALHHRSCEDMKLTKIRN 325
PE +ND KT DH +E K+ I +LR +T V+ + + D++ K R+
Sbjct: 191 PEIYNDSKTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARD 245
>BT015197-1|AAT94426.1| 954|Drosophila melanogaster RE71183p
protein.
Length = 954
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 265 SLSRTPSPFLRRHE 306
SLSRTPSPFL+ HE
Sbjct: 665 SLSRTPSPFLKPHE 678
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 265 SLSRTPSPFLRRHE 306
SLSRTPSPFL+ HE
Sbjct: 665 SLSRTPSPFLKPHE 678
>AE014134-3170|AAF53851.2| 538|Drosophila melanogaster CG10481-PA,
isoform A protein.
Length = 538
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = -1
Query: 412 LIDGLYV*LFWIPWFLFRPHSALFPKLHQISYFCQFHVFARTVMECV 272
++D Y+ F++ +FL R + F + +++F F + T++ CV
Sbjct: 404 IVDHYYLVRFYVRYFLDRSDAFEFEPDYAVAWFYYFVIVENTLLRCV 450
>AY061596-1|AAL29144.1| 751|Drosophila melanogaster SD04745p
protein.
Length = 751
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 313 KNKKSDEVSGKEQNEDEIKTKESKRAKRK 399
KNKK + + KEQ +++ K ++SK+ K K
Sbjct: 414 KNKKKKKKAEKEQEKEKEKQRKSKKEKEK 442
>AE014297-2765|AAF55743.2| 676|Drosophila melanogaster CG10887-PA
protein.
Length = 676
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 167 PEPFNDGKTQSDHTDDEEKEDIVN 238
PE F D T++D D++ +ED +N
Sbjct: 412 PETFQDRMTKNDLKDEQSREDFIN 435
>AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-PA
protein.
Length = 1330
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 313 KNKKSDEVSGKEQNEDEIKTKESKRAKRK 399
KNKK + + KEQ +++ K ++SK+ K K
Sbjct: 1005 KNKKKKKKAEKEQEKEKEKQRKSKKEKEK 1033
>AE013599-1475|AAX52710.1| 1089|Drosophila melanogaster CG30048-PB,
isoform B protein.
Length = 1089
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Frame = -1
Query: 388 LFWIPWFLFRP------HSALFPKLHQISYFCQF 305
+FWI W L++P SA +P++ + FC+F
Sbjct: 994 MFWINWSLWQPVTGSWRESAHYPRMSRAKRFCEF 1027
>AE013599-1474|AAM68678.3| 1243|Drosophila melanogaster CG30048-PA,
isoform A protein.
Length = 1243
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Frame = -1
Query: 388 LFWIPWFLFRP------HSALFPKLHQISYFCQF 305
+FWI W L++P SA +P++ + FC+F
Sbjct: 1148 MFWINWSLWQPVTGSWRESAHYPRMSRAKRFCEF 1181
>BT030404-1|ABO52823.1| 971|Drosophila melanogaster FI01202p
protein.
Length = 971
Score = 28.3 bits (60), Expect = 9.7
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 149 AVEKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLRDTQKVFHALHHRSCEDMKLTK-IRN 325
A E PPPE DGK +KED+ I D V A + K+ K I
Sbjct: 295 APETPPPE--QDGKEAPPSNASNDKEDLTMI---NDMVAVIAAERVKKTSSSKVNKMIIK 349
Query: 326 LMKFREKSRMRTK 364
L +++ R RTK
Sbjct: 350 LPMPKKRGRKRTK 362
>BT029949-1|ABM92823.1| 310|Drosophila melanogaster IP17161p
protein.
Length = 310
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +1
Query: 310 DKNKKSDEVSGKEQNEDEIKTKESKRAKRK 399
DK+K ++ +G++ NED+ + +E ++K K
Sbjct: 71 DKDKDDEDATGEDDNEDDEEEEEDIKSKPK 100
>BT029942-1|ABM92816.1| 310|Drosophila melanogaster IP16861p
protein.
Length = 310
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +1
Query: 310 DKNKKSDEVSGKEQNEDEIKTKESKRAKRK 399
DK+K ++ +G++ NED+ + +E ++K K
Sbjct: 71 DKDKDDEDATGEDDNEDDEEEEEDIKSKPK 100
>BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p
protein.
Length = 554
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 262 KSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESK---RAKRKAHQ 408
+SLSR+ S L R K + S S +EDE K ++ K + K K Q
Sbjct: 321 RSLSRSTSGSLERKHCRKPRSSSSSSSSSSSEDEKKRQKCKGKGKGKEKKRQ 372
>BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p
protein.
Length = 932
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 259 SKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
S +TP PF R+ +K + ++ +E+ TK S +A +
Sbjct: 746 SPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKRSSKASK 791
>AY060361-1|AAL25400.1| 667|Drosophila melanogaster LD04789p
protein.
Length = 667
Score = 28.3 bits (60), Expect = 9.7
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 149 AVEKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLRDTQKVFHALHHRSCEDMKLTK-IRN 325
A E PPPE DGK +KED+ I D V A + K+ K I
Sbjct: 295 APETPPPE--QDGKEAPPSNASNDKEDLTMI---NDMVAVIAAERVKKTSSSKVNKMIIK 349
Query: 326 LMKFREKSRMRTK 364
L +++ R RTK
Sbjct: 350 LPMPKKRGRKRTK 362
>AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant
protein.
Length = 1257
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 259 SKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
S +TP PF R+ +K + ++ +E+ TK S +A +
Sbjct: 767 SPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKRSSKASK 812
>AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein.
Length = 1236
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 259 SKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
S +TP PF R+ +K + ++ +E+ TK S +A +
Sbjct: 746 SPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKRSSKASK 791
>AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide
excision repair proteinMUS201 protein.
Length = 1236
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 259 SKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
S +TP PF R+ +K + ++ +E+ TK S +A +
Sbjct: 746 SPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKRSSKASK 791
>AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair
endonuclease protein.
Length = 1236
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 259 SKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
S +TP PF R+ +K + ++ +E+ TK S +A +
Sbjct: 746 SPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKRSSKASK 791
>AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA
protein.
Length = 554
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 262 KSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESK---RAKRKAHQ 408
+SLSR+ S L R K + S S +EDE K ++ K + K K Q
Sbjct: 321 RSLSRSTSGSLERKHCRKPRSSSSSSSSSSSEDEKKRQKCKGKGKGKEKKRQ 372
>AE014297-3135|AAF55980.2| 744|Drosophila melanogaster CG7069-PA
protein.
Length = 744
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +1
Query: 295 RRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKRKAHQ 408
+R + ++ KK + + K++NE + K +E++R KRK +
Sbjct: 640 KRLKEEEKKKEELMKCKQRNEAKKKREEAERCKRKERE 677
>AE014297-2361|AAS65164.1| 2046|Drosophila melanogaster CG31190-PB,
isoform B protein.
Length = 2046
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 164 PPEPFNDGKTQSDHTDDEEKEDIVNIPNLRDTQKVFHALHHRSCEDMKLTKIRNLM-KFR 340
PP F+DG+ DH+D E ++ +++ + Q+V + M ++ +L+ ++
Sbjct: 1977 PPAGFHDGREPGDHSDCEREQRALDL----EVQRVMESTGDAQLAKMDREELTSLLARYH 2032
Query: 341 EK 346
EK
Sbjct: 2033 EK 2034
>AE014297-2360|AAF55426.2| 2008|Drosophila melanogaster CG31190-PA,
isoform A protein.
Length = 2008
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 164 PPEPFNDGKTQSDHTDDEEKEDIVNIPNLRDTQKVFHALHHRSCEDMKLTKIRNLM-KFR 340
PP F+DG+ DH+D E ++ +++ + Q+V + M ++ +L+ ++
Sbjct: 1939 PPAGFHDGREPGDHSDCEREQRALDL----EVQRVMESTGDAQLAKMDREELTSLLARYH 1994
Query: 341 EK 346
EK
Sbjct: 1995 EK 1996
>AE014297-109|AAF52120.1| 701|Drosophila melanogaster CG1078-PA
protein.
Length = 701
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 310 DKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
DK+K+ D+ K++++++ K KES R +R
Sbjct: 621 DKDKEKDKEKDKDKDKEKEKDKESSRRER 649
>AE014296-2551|AAF49605.2| 971|Drosophila melanogaster CG7372-PA
protein.
Length = 971
Score = 28.3 bits (60), Expect = 9.7
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 149 AVEKPPPEPFNDGKTQSDHTDDEEKEDIVNIPNLRDTQKVFHALHHRSCEDMKLTK-IRN 325
A E PPPE DGK +KED+ I D V A + K+ K I
Sbjct: 295 APETPPPE--QDGKEAPPSNASNDKEDLTMI---NDMVAVIAAERVKKTSSSKVNKMIIK 349
Query: 326 LMKFREKSRMRTK 364
L +++ R RTK
Sbjct: 350 LPMPKKRGRKRTK 362
>AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-PC,
isoform C protein.
Length = 1236
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 259 SKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
S +TP PF R+ +K + ++ +E+ TK S +A +
Sbjct: 746 SPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKRSSKASK 791
>AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-PB,
isoform B protein.
Length = 1236
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 259 SKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
S +TP PF R+ +K + ++ +E+ TK S +A +
Sbjct: 746 SPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKRSSKASK 791
>AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-PA,
isoform A protein.
Length = 1257
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 259 SKSLSRTPSPFLRRHEIDKNKKSDEVSGKEQNEDEIKTKESKRAKR 396
S +TP PF R+ +K + ++ +E+ TK S +A +
Sbjct: 767 SPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKRSSKASK 812
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,684,079
Number of Sequences: 53049
Number of extensions: 431122
Number of successful extensions: 2134
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2129
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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