Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30380
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 118 3e-27
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 116 1e-26
09_06_0359 + 22508900-22509439 110 1e-24
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 105 5e-23
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 103 1e-22
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 103 1e-22
02_01_0160 + 1116160-1116678 103 1e-22
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 97 2e-20
10_01_0309 + 3417602-3418147 90 1e-18
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 86 3e-17
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 81 1e-15
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 77 1e-14
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 76 2e-14
06_01_0214 + 1634171-1634173,1634263-1634742 76 2e-14
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 67 1e-11
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 58 9e-09
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 56 2e-08
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 56 3e-08
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 51 8e-07
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 49 3e-06
02_01_0086 + 613113-613532 44 2e-04
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 41 0.001
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 40 0.001
01_01_0077 - 585670-585787,585921-586687 40 0.001
08_02_0053 + 11721658-11721689,11721960-11722710 32 0.39
10_01_0310 + 3425099-3425218 29 4.8
03_06_0109 - 31717691-31718311,31719110-31719223,31719316-317196... 28 8.4
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 118 bits (285), Expect = 3e-27
Identities = 54/67 (80%), Positives = 58/67 (86%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +F DENFK+KH G G LSMANAG+DTNGSQFFITTV T WLDG+HVVFGKVL GM
Sbjct: 131 SIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVLSGM 190
Query: 474 DVVQKIE 494
DVV KIE
Sbjct: 191 DVVYKIE 197
Score = 72.5 bits (170), Expect = 3e-13
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Frame = +1
Query: 22 LFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEG 201
L +A AK + +VTHKV FD++I G +V+GLFGKTVPKT ENF L +G
Sbjct: 34 LALAQAKKSKADL-TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG 92
Query: 202 EG-------YKGSKFHRVIKNFMIQ 255
G +KGS FHR+I +FMIQ
Sbjct: 93 TGKSGKALHFKGSAFHRIIPSFMIQ 117
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 116 bits (280), Expect = 1e-26
Identities = 53/74 (71%), Positives = 61/74 (82%)
Frame = +3
Query: 291 RSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 470
+SIYG F+DENFKL H G G +SMANAG +TNGSQFFI TVKTPWLDGRHVVFG+V+EG
Sbjct: 158 KSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVIEG 217
Query: 471 MDVVQKIEMTVTGR 512
MD+V+ IE T R
Sbjct: 218 MDIVKMIESQETDR 231
Score = 84.2 bits (199), Expect = 9e-17
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = +1
Query: 25 FIASAKSD--EIPKGPKVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQ 189
F++SA +D E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 190 KPEGEGYKGSKFHRVIKNFMIQ 255
+G GYKGS FHRVIK+FMIQ
Sbjct: 124 GEKGFGYKGSSFHRVIKDFMIQ 145
>09_06_0359 + 22508900-22509439
Length = 179
Score = 110 bits (264), Expect = 1e-24
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG+RF DENFKL+H G G LSMANAG +TNGSQFFI T +T WLDG+HVVFGKV++G
Sbjct: 86 SIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVVFGKVVDGY 145
Query: 474 DVVQKIEMTVTG 509
VV+K+E +G
Sbjct: 146 TVVEKMEQVGSG 157
Score = 58.4 bits (135), Expect = 5e-09
Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 237
KV FD+ IG G +V+ LF TVPKT ENF L +G G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 238 KNFMIQ 255
NFM Q
Sbjct: 67 PNFMCQ 72
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 105 bits (251), Expect = 5e-23
Identities = 49/72 (68%), Positives = 56/72 (77%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG FEDENF LKH G LSMANAG DTNGSQFFITT +TP LDG+HVVFG+V++GM
Sbjct: 128 SIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRTPHLDGKHVVFGRVIKGM 187
Query: 474 DVVQKIEMTVTG 509
VV+ +E G
Sbjct: 188 GVVRSMEHVSVG 199
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 28 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEG 201
+A+ K +E + D+ IG D G IV+ L+ P+T ENF L +G
Sbjct: 17 VAAGKEEEAEVVVVRNPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKG 74
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 103 bits (247), Expect = 1e-22
Identities = 50/67 (74%), Positives = 52/67 (77%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG F DENFK+ H G LSMAN KDTNGSQFFITTVK LDG+HVVFGKVL GM
Sbjct: 120 SIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKVLSGM 179
Query: 474 DVVQKIE 494
DVV KIE
Sbjct: 180 DVVYKIE 186
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/70 (51%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Frame = +1
Query: 67 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 225
KVT KV FD+ I G IV+GLFG TVPKT ENF + +G G YKG+ F
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 226 HRVIKNFMIQ 255
HR+I FMIQ
Sbjct: 97 HRIIPGFMIQ 106
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 103 bits (247), Expect = 1e-22
Identities = 47/72 (65%), Positives = 57/72 (79%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +FEDENF LKH G LSMAN+G +TNGSQFFITT +TP LDG+HVVFG+V++GM
Sbjct: 146 SIYGLKFEDENFVLKHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGM 205
Query: 474 DVVQKIEMTVTG 509
VV+ +E G
Sbjct: 206 GVVRSVEHAPVG 217
Score = 36.7 bits (81), Expect = 0.018
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 IASAKSDEIP-KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 204
+ASA + E+ K P+ D+ IG + G IVI L+ VP+T ENF L +G
Sbjct: 13 VASAAAAEVEVKNPRCF----MDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGV 68
Query: 205 GYKGSKFHRVIKNF 246
G K H K+F
Sbjct: 69 GAVTGK-HLHYKDF 81
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 211 KGSKFHRVIKNFMIQ 255
+GS FHRVIK FM+Q
Sbjct: 118 QGSCFHRVIKGFMVQ 132
>02_01_0160 + 1116160-1116678
Length = 172
Score = 103 bits (247), Expect = 1e-22
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYGE+F DE FK KH G LSMANAG +TNGSQFFI TV WLDG+HVVFG+V+EGM
Sbjct: 84 SIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTVPCSWLDGKHVVFGRVVEGM 143
Query: 474 DVVQKIE 494
DVV+ IE
Sbjct: 144 DVVKAIE 150
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 237
+V FDM +G G IV+ L+ K VP+T ENF L +G G YKGS FHRVI
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 238 KNFMIQ 255
FM Q
Sbjct: 65 PEFMCQ 70
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 96.7 bits (230), Expect = 2e-20
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = +3
Query: 291 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 467
+SI+G FEDE K L+H LSMANAG +TNGSQFFITTV TPWLD +H VFG+V++
Sbjct: 559 QSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVK 618
Query: 468 GMDVVQKIEMTVTGR 512
GMDVVQ+IE T +
Sbjct: 619 GMDVVQQIEKVKTDK 633
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 112 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
++G I + L+ + PKT ENF + Y FHRVIK FMIQ
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQ 547
>10_01_0309 + 3417602-3418147
Length = 181
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +3
Query: 312 FEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 491
F DE F +KH G G +SMANAG +TNGSQFFIT K PWLDGRHV FG+V+ GM V+ I
Sbjct: 100 FPDEGFAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAI 159
Query: 492 EMTVT 506
+ T T
Sbjct: 160 DRTGT 164
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +1
Query: 67 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKF 225
K +V D+ IG + +G +VI L VP T ENF +L ++ G YKGS F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 226 HRVIKNFMIQ 255
HRV+ FM Q
Sbjct: 68 HRVVPGFMCQ 77
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +3
Query: 294 SIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 470
SIYG +FEDE +LKH GAG LSMANAG +TNGSQFFIT LDG+H +FG+V +G
Sbjct: 74 SIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRVSKG 133
Query: 471 MDVVQKIEMTVTGR 512
M++V+++ T +
Sbjct: 134 MEIVKRLGSVQTDK 147
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 106 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
+ ++G I ++ K PKT NF +L+++ Y FHR+IK+F++Q
Sbjct: 15 ETSMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQ 61
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG FEDENF L+H G LSMANAG +TNGSQFFIT LD + VFGK++ G
Sbjct: 88 SIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHNSRLDRKSTVFGKLILGN 147
Query: 474 DVVQKIE 494
DV+++IE
Sbjct: 148 DVLKRIE 154
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +1
Query: 82 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 237
V D+ IGD+ +V LF P+T ENF L G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 238 KNFMIQ 255
K FM Q
Sbjct: 69 KGFMAQ 74
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = +1
Query: 67 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 246
KV K FD+++G + G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 247 MIQ 255
MIQ
Sbjct: 123 MIQ 125
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +3
Query: 291 RSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVK 419
RSIYGE F+DENF LKH G G LSMANAG DTNGSQFFI TVK
Sbjct: 138 RSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVK 180
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +3
Query: 357 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 494
++MAN+G D+NGSQF+ITT+KT WLDG HVVFG+V++GMD V IE
Sbjct: 118 IAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIE 163
Score = 67.7 bits (158), Expect = 8e-12
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSK 222
P VT++V D++I +IG IVIGL+G VPKT NF L EG G YKGS+
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 223 FHRVIKNFMIQ 255
FHR+I FMIQ
Sbjct: 94 FHRIIPGFMIQ 104
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 SIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 470
SI+G++F DE LKH G +SMAN+G +TNGSQFFIT K P L+G + VF KV+ G
Sbjct: 65 SIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIHG 124
Query: 471 MDVVQKIEMTVTG 509
+V+ +E TG
Sbjct: 125 FEVLDLMEKAQTG 137
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +1
Query: 112 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
N+G I +F P+T ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQ 52
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 SIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 470
SI+G+ F+DE N KL H G G +SMAN+G TNGSQFFI P L+ +H VFG V+ G
Sbjct: 409 SIWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGG 468
Query: 471 MDVVQKIE 494
+ + +E
Sbjct: 469 LTTLSAME 476
Score = 34.3 bits (75), Expect = 0.097
Identities = 26/69 (37%), Positives = 30/69 (43%)
Frame = +1
Query: 49 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 228
++ K PK V GD N+ L P+T ENF E Y G FH
Sbjct: 336 KVEKNPKKKGYVQLHTTHGDLNLE-----LHCDITPRTCENFLTHC---ENGYYNGLIFH 387
Query: 229 RVIKNFMIQ 255
R IKNFMIQ
Sbjct: 388 RSIKNFMIQ 396
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 57.6 bits (133), Expect = 9e-09
Identities = 35/72 (48%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Frame = +1
Query: 55 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGS 219
P PK V FD+ IG G I + LF VPKT ENF Q + G +GYKG
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 220 KFHRVIKNFMIQ 255
+FHRVIK+FMIQ
Sbjct: 90 QFHRVIKDFMIQ 101
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +3
Query: 396 QFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTG 509
QFFIT K WLD +HVVFG+VL +GM V+KIE TG
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATG 238
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANA 374
SIYG +F+DENF KH G G LSM +
Sbjct: 115 SIYGTKFDDENFIAKHTGPGLLSMVRS 141
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Frame = +3
Query: 297 IYGE--RFEDENFK--LKHYGAGWLSMANAGKDTNGSQFFIT-TVKTPWLDGRHVVFGKV 461
+YG+ RF D+ + L+H G ++MA+AG++ N SQF+IT +LD +H VFG V
Sbjct: 70 LYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHTVFGMV 129
Query: 462 LEGMDVVQKIEMT 500
EG D + KI T
Sbjct: 130 AEGFDTLTKISET 142
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 112 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQ 52
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +3
Query: 312 FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQ 485
F+DE + +L+H G ++MA+AG++ N SQF+IT +LD +H VFG V EG D +
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTIT 167
Query: 486 KIEMT 500
KI T
Sbjct: 168 KINET 172
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +3
Query: 294 SIYGERFEDE-NFKLKHYGAGWLSMANAGKD-TNGSQFFITTVKTPWLDGRHVVFGKV 461
SIYG F DE + +L+ G ++ ANAG +NGSQFFI+ + WLD ++ +FGKV
Sbjct: 77 SIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV 134
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 118 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++Q
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ 64
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 52 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------- 207
+PK K H V FD+ IG I LF VPKTTENF L G G
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLY 59
Query: 208 YKGSKFHRVIKNFMIQ 255
+KG+ HR++K FM Q
Sbjct: 60 FKGTNMHRILKGFMAQ 75
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3
Query: 438 RHVVFGKVLEGMDVVQKIE 494
+HVVFGKV+ GM +++K+E
Sbjct: 94 KHVVFGKVVTGMPLLKKLE 112
>02_01_0086 + 613113-613532
Length = 139
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +3
Query: 318 DENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEM 497
+ENF L H WL N + N SQFF + PW DG +VVFG ++ G ++ IE
Sbjct: 63 NENFLLPH-DRPWLP--NGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIEA 116
Query: 498 TV 503
V
Sbjct: 117 EV 118
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 333 LKHYGAGWLSMA-NAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTG 509
+KH G LSM ++ ++ GS F I P LDG++ VFG++ +G D ++K+E T
Sbjct: 157 VKHV-RGILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQLPTR 215
Query: 510 R 512
R
Sbjct: 216 R 216
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 118 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQV 258
G I G F PKT E+ ++L + Y + F RV K F+ QV
Sbjct: 84 GDIEFGFFPHVAPKTVEHIYKLVRL---GCYNTNHFFRVDKGFVAQV 127
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 381 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 494
+ G FITT P L+ + VVFG+V+ G D+VQ+IE
Sbjct: 186 NNKGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIE 223
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 118 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
G+I I ++ + F L + +KG F VIKNF+IQ
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQ 145
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +3
Query: 387 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 506
NG++F ITT P LD +V G+V++GMDV+ KI T
Sbjct: 206 NGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAVPT 245
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Frame = +3
Query: 306 ERFEDENFKLKHYGAGWLSMANAGKDTNGS----------QFFITTVKTPW--LDGRHVV 449
E + + F+LKH G LS+ D + +F +TT P LDG+++V
Sbjct: 194 ETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDGQNIV 253
Query: 450 FGKVLEG 470
FG VLEG
Sbjct: 254 FGTVLEG 260
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 118 GTIVIGLFGKTVPKTTENF 174
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
>03_06_0109 -
31717691-31718311,31719110-31719223,31719316-31719606,
31719698-31720006,31720098-31720865
Length = 700
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -1
Query: 338 LQLEVFIFKTFTIYTAPSSSITLGKITTWIMKFLITLWNLLPLYPSPSGF 189
L L + F F I + + ++ W++ ++ L +LL + PSP F
Sbjct: 513 LILPFYSFTLFCIILPMTMFVPEAELPDWVVCYIPALMSLLNILPSPKSF 562
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,965,866
Number of Sequences: 37544
Number of extensions: 354724
Number of successful extensions: 757
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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