Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30380
(710 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 122 3e-28
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 119 2e-27
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 116 2e-26
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 113 1e-25
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 111 6e-25
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 110 8e-25
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 107 7e-24
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 107 9e-24
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 103 9e-23
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 103 1e-22
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 99 1e-21
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 99 1e-21
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 99 3e-21
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 97 8e-21
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 96 2e-20
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 95 3e-20
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 92 4e-19
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 81 7e-16
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 62 3e-10
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 62 3e-10
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 55 4e-08
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 55 4e-08
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 52 5e-07
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 43 2e-04
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 39 0.003
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 39 0.003
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 39 0.003
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 36 0.020
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 33 0.25
At4g39030.1 68417.m05528 enhanced disease susceptibility 5 (EDS5... 31 0.57
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 29 4.0
At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5) i... 29 4.0
At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5) i... 29 4.0
At1g06490.1 68414.m00688 glycosyl transferase family 48 protein ... 29 4.0
At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-g... 28 7.0
At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putat... 27 9.3
At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putat... 27 9.3
At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putat... 27 9.3
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 27 9.3
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 122 bits (293), Expect = 3e-28
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYGE+F DENFKLKH G G+LSMANAG+DTNGSQFFITTV T WLDGRHVVFGKV+ GM
Sbjct: 115 SIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGM 174
Query: 474 DVVQKIE 494
DVV K+E
Sbjct: 175 DVVYKVE 181
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 MALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQL 183
+ LG L I + KS E K ++THKV FD++I G IV+GLFGKTVPKT ENF L
Sbjct: 13 LLLGTLSAIQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRAL 70
Query: 184 AQKPEGEG-------YKGSKFHRVIKNFMIQ 255
+G G YKGS FHR+I +FM+Q
Sbjct: 71 CTGEKGIGKNGKALHYKGSSFHRIIPSFMLQ 101
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 119 bits (287), Expect = 2e-27
Identities = 54/67 (80%), Positives = 60/67 (89%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG++F DENFKLKH G G LSMAN+G+DTNGSQFFITTV T WLDGRHVVFGKV++GM
Sbjct: 112 SIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGM 171
Query: 474 DVVQKIE 494
DVV KIE
Sbjct: 172 DVVYKIE 178
Score = 77.0 bits (181), Expect = 1e-14
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Frame = +1
Query: 28 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 207
IAS ++ E K +VTHKV FD++I + G +VIGLFGK VPKT ENF L +G G
Sbjct: 18 IASIQAKEDLK--EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75
Query: 208 -------YKGSKFHRVIKNFMIQ 255
YKGSKFHR+I +FMIQ
Sbjct: 76 KSGKPLHYKGSKFHRIIPSFMIQ 98
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 116 bits (279), Expect = 2e-26
Identities = 52/67 (77%), Positives = 59/67 (88%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG++F DENFKLKH G G+LSMAN+G D+NGSQFFITTV T WLDG HVVFGKVL GM
Sbjct: 139 SIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGM 198
Query: 474 DVVQKIE 494
+VV+KIE
Sbjct: 199 EVVRKIE 205
Score = 68.5 bits (160), Expect = 4e-12
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Frame = +1
Query: 28 IASAKSDEIPKGPK-VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 204
I AK +++ + + VTHKV FD++I G I+IGLFG VPKT ENF L +G
Sbjct: 42 ILDAKLNQVGEDLEGVTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGV 101
Query: 205 G-------YKGSKFHRVIKNFMIQ 255
G +KGS FHR+I FMIQ
Sbjct: 102 GNMGKPLYFKGSSFHRIIPGFMIQ 125
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 113 bits (271), Expect = 1e-25
Identities = 51/74 (68%), Positives = 60/74 (81%)
Frame = +3
Query: 291 RSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 470
+S+YG F+DENFKL H G G LSMANAG +TNGSQFFI T+KT WLDGRHVVFG+V+EG
Sbjct: 165 KSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEG 224
Query: 471 MDVVQKIEMTVTGR 512
M+VV+ IE T R
Sbjct: 225 MEVVKLIEEQETDR 238
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = +1
Query: 67 KVTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 237
K+THKV FD+ +G+ G IVIGL+G VP+T ENF L +G GYKGS FHRVI
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
Query: 238 KNFMIQ 255
++FMIQ
Sbjct: 147 RDFMIQ 152
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 111 bits (266), Expect = 6e-25
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+
Sbjct: 84 SIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGL 143
Query: 474 DVVQKIE 494
DVV+ IE
Sbjct: 144 DVVKAIE 150
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 237
KV FDM I G IV+ L+ P+T ENF L +G G +KGSKFHRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 238 KNFMIQ 255
NFM Q
Sbjct: 65 PNFMCQ 70
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 110 bits (265), Expect = 8e-25
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+
Sbjct: 85 SIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGL 144
Query: 474 DVVQKIE 494
DVV+ IE
Sbjct: 145 DVVKAIE 151
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 237
KV FDM IG G IV+ L+ PKT ENF L +G G +KGS FHRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 238 KNFMIQ 255
NFM Q
Sbjct: 66 PNFMCQ 71
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 107 bits (257), Expect = 7e-24
Identities = 48/67 (71%), Positives = 57/67 (85%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +FEDENFKLKH G G LSMAN+G +TNGSQFFI T KT WLDG+HVVFGKV++G
Sbjct: 84 SIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGY 143
Query: 474 DVVQKIE 494
+VV+ +E
Sbjct: 144 NVVKAME 150
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 237
KV FD+ IG G +V+ LF P+T NF L G G YKGS FHR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 238 KNFMIQ 255
FM Q
Sbjct: 65 PGFMCQ 70
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 107 bits (256), Expect = 9e-24
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +FEDENF LKH G G LSMANAG +TNGSQFFI TVKT WLD +HVVFG+V+EGM
Sbjct: 168 SIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGM 227
Query: 474 DVVQKIEMTVT 506
+V+ +E T
Sbjct: 228 KLVRTLESQET 238
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +1
Query: 28 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 207
+A+ + + I KVT+KV FD++IG + G IV+GLFG+ VPKT ENF L + G
Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG 138
Query: 208 YKGSKFHRVIKNFMIQ 255
YKGS FHR+IK+FMIQ
Sbjct: 139 YKGSSFHRIIKDFMIQ 154
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 103 bits (248), Expect = 9e-23
Identities = 47/67 (70%), Positives = 57/67 (85%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +F+DENF KH GAG LSMAN+G +TNGSQFFI T KT WLDG+HVVFG+V++G+
Sbjct: 84 SIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGL 143
Query: 474 DVVQKIE 494
DVV+ IE
Sbjct: 144 DVVKAIE 150
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 237
+V FDM + IG I + LF T P T ENF L +G G +KGS FHRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 238 KNFMIQ 255
FM Q
Sbjct: 65 PGFMCQ 70
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 103 bits (247), Expect = 1e-22
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +F+DENF KH G G LSMANAG +TNGSQFFI T KT WLDG+HVVFG+V+EG+
Sbjct: 85 SIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGL 144
Query: 474 DVVQKIE 494
+VV+ IE
Sbjct: 145 NVVRDIE 151
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 237
KV FDM +G + G IV+ L+ T P+T ENF L G G YKGS FHRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 238 KNFMIQ 255
FM Q
Sbjct: 66 PKFMCQ 71
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 99 bits (238), Expect = 1e-21
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +F DENF+L H GAG LSMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM
Sbjct: 88 SIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGM 147
Query: 474 DVVQKIEMTVT 506
V++K+E+ T
Sbjct: 148 AVIKKMELVGT 158
Score = 54.4 bits (125), Expect = 7e-08
Identities = 33/71 (46%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +1
Query: 67 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 222
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 223 FHRVIKNFMIQ 255
FHRVIK FM Q
Sbjct: 64 FHRVIKGFMAQ 74
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 99 bits (238), Expect = 1e-21
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +F DENF+L H GAG LSMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM
Sbjct: 88 SIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGM 147
Query: 474 DVVQKIEMTVT 506
V++K+E+ T
Sbjct: 148 AVIKKMELVGT 158
Score = 54.4 bits (125), Expect = 7e-08
Identities = 33/71 (46%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +1
Query: 67 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 222
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 223 FHRVIKNFMIQ 255
FHRVIK FM Q
Sbjct: 64 FHRVIKGFMAQ 74
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 98.7 bits (235), Expect = 3e-21
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG +F+DENF+LKH G LSMAN+G +TNGSQFFITT +T LDG+HVVFG+V +GM
Sbjct: 85 SIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGM 144
Query: 474 DVVQKIE 494
VV+ IE
Sbjct: 145 GVVRSIE 151
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRV 234
K D+ IG + G IVI L+ VPKT ENF L +G G YKG++FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 235 IKNFMIQ 255
IK FMIQ
Sbjct: 65 IKGFMIQ 71
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIYG F DENFK++H AG ++MAN G D+NGSQFFITTVK WL+G HVV GKV++GM
Sbjct: 127 SIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGM 186
Query: 474 DVVQKIE 494
D V IE
Sbjct: 187 DNVFAIE 193
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 12/96 (12%)
Frame = +1
Query: 4 MALGILLFIA---SAKSDE--IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTE 168
+AL I L A + K +E + + ++T++V D+ I +G IVIGL+G VPKT E
Sbjct: 18 VALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVE 77
Query: 169 NFFQLAQKPEGE-------GYKGSKFHRVIKNFMIQ 255
NF L +G+ YKG+ FHR+I F+IQ
Sbjct: 78 NFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQ 113
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EG 470
SIYG +FEDENF KH G G LSMAN+G +TNG QFFIT K WLD +HVVFG+VL +G
Sbjct: 110 SIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDG 169
Query: 471 MDVVQKIEMTVTG 509
+ V++KIE G
Sbjct: 170 LLVMRKIENVAIG 182
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Frame = +1
Query: 55 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQ-----LAQKPEGEGYKGS 219
P PK V FD+ IG G I + LF PKT ENF Q L + + GYK
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKEC 84
Query: 220 KFHRVIKNFMIQ 255
+FHRVIK+FM+Q
Sbjct: 85 QFHRVIKDFMVQ 96
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 95.5 bits (227), Expect = 3e-20
Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = +3
Query: 291 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 467
+SI+G FEDE K L+H LSMANAG +TNGSQFFITTV TPWLD +H VFG+V++
Sbjct: 539 QSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVK 598
Query: 468 GMDVVQKIEMTVTGR 512
GMDVVQ IE T +
Sbjct: 599 GMDVVQGIEKVKTDK 613
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 115 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQ 527
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 91.9 bits (218), Expect = 4e-19
Identities = 42/67 (62%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = +3
Query: 294 SIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 470
SIYG +FEDE N +LKH GAG LSMANAG +TNGSQFFIT P LDG+H +FG+V G
Sbjct: 74 SIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRG 133
Query: 471 MDVVQKI 491
M+V++++
Sbjct: 134 MEVIKRL 140
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 106 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQ 61
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 81.0 bits (191), Expect = 7e-16
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 SIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 470
SI+G++F DE LKH G LSMAN+G +TNGSQFFIT K P L+G + +FGKV+ G
Sbjct: 65 SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHG 124
Query: 471 MDVVQKIEMTVTG 509
+V+ +E T TG
Sbjct: 125 FEVLDIMEKTQTG 137
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +1
Query: 112 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQ 52
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 SIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 470
SI+G+ F+DE N KL H G G +SMAN+G TNGSQFF+ L+ +H VFG V+ G
Sbjct: 408 SIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGG 467
Query: 471 MDVVQKIE 494
+ + +E
Sbjct: 468 LATLAAME 475
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/69 (37%), Positives = 32/69 (46%)
Frame = +1
Query: 49 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 228
++ K PK V F GD NI L P+ ENF L ++ Y G FH
Sbjct: 335 KVEKNPKKKGYVQFQTTHGDLNIE-----LHCDIAPRACENFITLCERGY---YNGVAFH 386
Query: 229 RVIKNFMIQ 255
R I+NFMIQ
Sbjct: 387 RSIRNFMIQ 395
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +3
Query: 294 SIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 473
SIY +F DE+ KL+H G LSM+ A +D GS F IT LD +VVFGK+++G
Sbjct: 88 SIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGK 147
Query: 474 DVVQKIE 494
++++KIE
Sbjct: 148 EILKKIE 154
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = +1
Query: 67 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 222
K +V D+ I D T+V LF + PKT+ENF L +G G YKGS
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63
Query: 223 FHRVIKNFMIQ 255
FHR++K Q
Sbjct: 64 FHRIMKGSSAQ 74
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +3
Query: 294 SIYGERFEDE-NFKLKHYGAGWLSMANAGK-DTNGSQFFITTVKTPWLDGRHVVFGKV 461
SIYG F DE + +L+ G ++MANA ++NGSQFF T K WLD +H +FGKV
Sbjct: 77 SIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 118 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQ 255
G I + L+ K PK+ NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQ 64
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Frame = +3
Query: 297 IYGER---FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKT-PWLDGRHVVFGKV 461
+YGE+ ++DE + LKH G ++MA+ G++ N SQF+ T +LDG+H VFG++
Sbjct: 70 LYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQI 129
Query: 462 LEGMDVVQKI 491
EG D + +I
Sbjct: 130 AEGFDTLTRI 139
Score = 30.7 bits (66), Expect = 1.00
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 112 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 255
++G IVI L P T +NF +L + + Y G FH V K+F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQ 52
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +3
Query: 297 IYGERFEDENFKLKHY-GAGWLSMANAGKDTNGSQFFITTVKTPW-LDGRHVVFGKVLEG 470
I+ E +DE F L H G G +SMA D+NGSQF I +DG HVV GKV+EG
Sbjct: 81 IHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEG 136
Query: 471 MDVVQKIEMTV 503
+D+++ IE V
Sbjct: 137 LDLMRNIEKEV 147
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 79 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 237
KV FD+ + G IVI LF P+T ENF L G G YKGS F ++
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 238 KNFM 249
+ M
Sbjct: 65 PDLM 68
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 387 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGR 512
NG++F IT V +P L+ +V GKVLEGM VV+K+ T R
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVR 271
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 73 THKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 249
T K D+ I + IG I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 91 TKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 118 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQVVILPRVMELE 288
G I + LF + P+ + F L QK + +KG F RVIKN+++Q P + +E
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVE 143
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 396 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 494
+ ITT P L+ + +VFG+VL+G DVVQ+IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 118 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQVVILPRVMELE 288
G I + LF + P+ + F L QK + +KG F RVIKN+++Q P + +E
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVE 143
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 396 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 494
+ ITT P L+ + +VFG+VL+G DVVQ+IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 118 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQVVILPRVMELE 288
G I + LF + P+ + F L QK + +KG F RVIKN+++Q P + +E
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVE 143
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 396 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 494
+ ITT P L+ + +VFG+VL+G DVVQ+IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 381 DTNGSQFFITTVK--TPWLDGRHVVFGKVLEGMDVVQKIEMTVT 506
D +F ITT +P LDG ++VFG VLEG+DVV I T
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPT 234
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 115 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 234
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 106 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQ 255
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQ 129
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 372 AGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 506
A + G +FFI + + L+ + VFG+V +G DVVQ+IE T
Sbjct: 165 AKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIEEVET 209
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 333 LKHYGAGWLSMANAGKDTNGSQ--FFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 506
+KH G LSM D N +Q F + P LD ++ VFGKV +G + + K+E T
Sbjct: 114 VKHV-RGTLSMGRYD-DPNSAQSSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVPT 171
Query: 507 GR 512
R
Sbjct: 172 RR 173
>At4g39030.1 68417.m05528 enhanced disease susceptibility 5 (EDS5) /
salicylic acid induction deficient 1 (SID1) identical to
SP|Q945F0; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 543
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 217 SKFHRVIKNFMIQVVILPRVMELEGAVYMVNVLKMKTSS*STMVLVGYLWLM 372
S+ HR++ F + + LP + LEG + LK +S S+ ++G L LM
Sbjct: 438 SEMHRLLIPFFMALSALPMTVSLEGTLLAGRDLKFVSSVMSSSFIIGCLTLM 489
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = +3
Query: 294 SIYGERFEDENFKLKH--YGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHV-VFGKVL 464
S Y F ++ H Y WLS G + N S +ITT P ++ F
Sbjct: 123 SFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEKNSSSVYITTSSPPNAYKAYLNQFQSDF 182
Query: 465 EGMDVVQKIEMTVTGRMI 518
+ ++ EM GRM+
Sbjct: 183 KSFLEMRSEEMVSNGRMV 200
>At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 680
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 4 MALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQ- 180
+ L +LLFIA + K K T + ++GDD + L +T+ T +F +
Sbjct: 295 VVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTATNDFAES 354
Query: 181 --LAQKPEGEGYKGS 219
+ + GE YKG+
Sbjct: 355 NKIGRGGFGEVYKGT 369
>At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 674
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 4 MALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQ- 180
+ L +LLFIA + K K T + ++GDD + L +T+ T +F +
Sbjct: 295 VVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTATNDFAES 354
Query: 181 --LAQKPEGEGYKGS 219
+ + GE YKG+
Sbjct: 355 NKIGRGGFGEVYKGT 369
>At1g06490.1 68414.m00688 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1933
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 326 VFIFKTFTIYTAPSSSITLGKITTWIMKFLITLWNLLPLYPSPSGF 189
V + + +Y S + T+ M FL+T W P +PSGF
Sbjct: 1648 VILLVVYQVYGTSYRSSSTYMYITFSMWFLVTSWLFAPFIFNPSGF 1693
>At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-glucan
synthase, putative similar to callose synthase 1
catalytic subunit GI:13649388 from [Arabidopsis thaliana]
Length = 1768
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 344 IVLQLEVFIFKTFTIYTAPSSSITLGKITTWIMKFLITLWNLLPLYPSPSGF 189
I L + + ++ ++ S L I++W FLIT W + P +PSGF
Sbjct: 1486 IELAIILLVYAAYSPLAKSSFVYILMTISSW---FLITSWIISPFLFNPSGF 1534
>At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 46 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 222
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 223 FHRV 234
F R+
Sbjct: 429 FPRI 432
>At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 46 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 222
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 223 FHRV 234
F R+
Sbjct: 429 FPRI 432
>At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putative
/ UMP pyrophosphorylase, putative / UPRTase, putative
similar to SP|O65583 Uracil phosphoribosyltransferase
(EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase)
{Arabidopsis thaliana}; contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 466
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 46 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 222
+++P H + D +G N I L K VP++ F L PEG K
Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428
Query: 223 FHRV 234
F R+
Sbjct: 429 FPRI 432
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.5 bits (58), Expect = 9.3
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 306 ERFEDENFKLKHYGAGWLSM---ANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMD 476
E E+E + KH +L + A +G DTNG FF KT +VF L +
Sbjct: 533 EECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLS--E 590
Query: 477 VVQKIE 494
VV+K++
Sbjct: 591 VVEKLQ 596
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,796,405
Number of Sequences: 28952
Number of extensions: 303550
Number of successful extensions: 799
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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