Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30379
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    25   2.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   2.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.2  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   2.2  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   2.2  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +2

Query: 29  NGRKRPGSAPGIAEV--HGLSSAYKGHKKY 112
           N    P + P  A    HGL    KGHK+Y
Sbjct: 30  NNSLNPRTPPNCARCRNHGLKIGLKGHKRY 59


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +2

Query: 29  NGRKRPGSAPGIAEV--HGLSSAYKGHKKY 112
           N    P + P  A    HGL    KGHK+Y
Sbjct: 30  NNSLNPRTPPNCARCRNHGLKIGLKGHKRY 59


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 397 EVCLLAGTHVTT*HQQCVHGVNEFALLLKF 486
           E+  +AGT + + H   +HG   +  LLKF
Sbjct: 268 ELLAVAGTELGSPHMTDIHGATVYNNLLKF 297


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +2

Query: 29  NGRKRPGSAPGIAEV--HGLSSAYKGHKKY 112
           N    P + P  A    HGL    KGHK+Y
Sbjct: 30  NNSLNPRTPPNCARCRNHGLKIGLKGHKRY 59


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +2

Query: 29  NGRKRPGSAPGIAEV--HGLSSAYKGHKKY 112
           N    P + P  A    HGL    KGHK+Y
Sbjct: 30  NNSLNPRTPPNCARCRNHGLKIGLKGHKRY 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,955
Number of Sequences: 2352
Number of extensions: 14237
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)