Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30379
         (683 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050539-1|AAH50539.1|  389|Homo sapiens solute carrier family 1...    31   3.8  
Y19039-1|CAB60834.1|  389|Homo sapiens urea transporter-B1 protein.    30   6.7  
U35735-1|AAB00181.1|  389|Homo sapiens RACH1 protein.                  30   6.7  
AY942197-1|AAX20112.1|  389|Homo sapiens solute carrier family 1...    30   6.7  

>BC050539-1|AAH50539.1|  389|Homo sapiens solute carrier family 14
           (urea transporter), member 1 (Kidd blood group) protein.
          Length = 389

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 80  LSSAYKGHKKYLFLTLIPICGFDAACPFFYLDLSYIITAFSLP 208
           L + +     Y +  L+P+C     CP F   L+ +++ + LP
Sbjct: 132 LMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSVLSKWDLP 174


>Y19039-1|CAB60834.1|  389|Homo sapiens urea transporter-B1 protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 80  LSSAYKGHKKYLFLTLIPICGFDAACPFFYLDLSYIITAFSLP 208
           L + +     Y +  L+P+C     CP F   L+ +++ + LP
Sbjct: 132 LMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLP 174


>U35735-1|AAB00181.1|  389|Homo sapiens RACH1 protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 80  LSSAYKGHKKYLFLTLIPICGFDAACPFFYLDLSYIITAFSLP 208
           L + +     Y +  L+P+C     CP F   L+ +++ + LP
Sbjct: 132 LMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLP 174


>AY942197-1|AAX20112.1|  389|Homo sapiens solute carrier family 14
           (urea transporter), member 1 (Kidd blood group) protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 80  LSSAYKGHKKYLFLTLIPICGFDAACPFFYLDLSYIITAFSLP 208
           L + +     Y +  L+P+C     CP F   L+ +++ + LP
Sbjct: 132 LMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLP 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,384,231
Number of Sequences: 237096
Number of extensions: 1969170
Number of successful extensions: 2966
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2966
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)