Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30378
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.8  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/55 (23%), Positives = 28/55 (50%)
 Frame = -3

Query: 609 SFGIGLIRIQIFMHFQSVEWLIRTLFHKSNLRCAFILHKLLSNIFELIISLRQCY 445
           +FG+ +  + +F+  QSV+ L    ++K   +   +   LL  + +L+ +L   Y
Sbjct: 193 TFGVPIFLVLVFVQMQSVQDLSDIFYYKDTAQLVSL--ALLMQLTQLVPALFVIY 245


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/46 (21%), Positives = 25/46 (54%)
 Frame = -3

Query: 594 LIRIQIFMHFQSVEWLIRTLFHKSNLRCAFILHKLLSNIFELIISL 457
           ++R+Q F ++QS+   +R  F   N+   ++  +L+  +    ++L
Sbjct: 510 VLRVQRFNNYQSLAHYLRVFFTVFNVVHCYLASELVLMLKNRFVTL 555


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 500 STSCCLTFSNSSFLCV 453
           S + C+TFSN    CV
Sbjct: 151 SDTMCVTFSNLGIQCV 166


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 188 EVYFQMQPFHLLFQTLKFLI 129
           ++Y Q   + LLF TLK L+
Sbjct: 139 QLYSQFILYFLLFATLKILL 158


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 188 EVYFQMQPFHLLFQTLKFLI 129
           ++Y Q   + LLF TLK L+
Sbjct: 139 QLYSQFILYFLLFATLKILL 158


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 188 EVYFQMQPFHLLFQTLKFLI 129
           ++Y Q   + LLF TLK L+
Sbjct: 459 QLYSQFILYFLLFATLKILL 478


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,213
Number of Sequences: 336
Number of extensions: 2502
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)