Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30378
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical pr... 31 0.81
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein. 31 0.81
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 31 0.81
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 30 1.4
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 30 1.4
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 1.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 1.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 1.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 1.9
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 4.3
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 4.3
Z93785-5|CAB07861.3| 321|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z78198-9|CAE17828.1| 164|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical pr... 27 9.9
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 9.9
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/43 (27%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MEQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEK 166
M + L+S+++ E+++RNLQ + + + EIL++++E+++
Sbjct: 19 MFHIEELRSEIEQLEQYIRNLQINFEKIQTENEILKTQLEEKE 61
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 59 QSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEKVAF 175
+S + EE +RN EKY D +N E + I+D+KV +
Sbjct: 176 ESSFERHEEQVRNENEKYVDYVNLHEFV--AIKDDKVVY 212
>Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical
protein C34B4.1a protein.
Length = 995
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 59 QSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEKVAF 175
+S + EE +RN EKY D +N E + I+D+KV +
Sbjct: 72 ESSFERHEEQVRNENEKYVDYVNLHEFV--AIKDDKVVY 108
>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
Length = 1045
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 59 QSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEKVAF 175
+S + EE +RN EKY D +N E + I+D+KV +
Sbjct: 122 ESSFERHEEQVRNENEKYVDYVNLHEFV--AIKDDKVVY 158
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 59 QSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEKVAF 175
+S + EE +RN EKY D +N E + I+D+KV +
Sbjct: 176 ESSFERHEEQVRNENEKYVDYVNLHEFV--AIKDDKVVY 212
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 41 EQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEKVA 172
EQ+ LQ+ L+D + L+ + ++YA ++ L +E+E+ K A
Sbjct: 576 EQLKILQASLEDTQRQLQQVLDQYALAQRKVAALSAELEECKTA 619
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 41 EQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEKVA 172
EQ+ LQ+ L+D + L+ + ++YA ++ L +E+E+ K A
Sbjct: 576 EQLKILQASLEDTQRQLQQVLDQYALAQRKVAALSAELEECKTA 619
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 41 EQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEKVA 172
EQ+ LQ+ L+D + L+ + ++YA ++ L +E+E+ K A
Sbjct: 592 EQLKILQASLEDTQRQLQQVLDQYALAQRKVAALSAELEECKTA 635
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 8 TQEETHKIVTMEQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIED 160
T EE+ + E + S+++++ E HLR + K A + ++E+L ++ D
Sbjct: 1400 TNEESSRSREHE-IRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHD 1449
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 8 TQEETHKIVTMEQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIED 160
T EE+ + E + S+++++ E HLR + K A + ++E+L ++ D
Sbjct: 1400 TNEESSRSREHE-IRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHD 1449
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 8 TQEETHKIVTMEQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIED 160
T EE+ + E + S+++++ E HLR + K A + ++E+L ++ D
Sbjct: 1160 TNEESSRSREHE-IRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHD 1209
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 8 TQEETHKIVTMEQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIED 160
T EE+ + E + S+++++ E HLR + K A + ++E+L ++ D
Sbjct: 1400 TNEESSRSREHE-IRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHD 1449
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 385 LTHQLELKDSEIYQKTHEYTITLTQRNDEFENVRQQLVEYESASKI*LMKKS 540
L QLE E+ +K EY L Q+++ +E + + + E E +K L K++
Sbjct: 870 LREQLEQAQHELEKKKREYMWKLQQKDEFYEIMDRNVKETEKENKRLLRKRT 921
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 385 LTHQLELKDSEIYQKTHEYTITLTQRNDEFENVRQQLVEYESASKI*LMKKS 540
L QLE E+ +K EY L Q+++ +E + + + E E +K L K++
Sbjct: 870 LREQLEQAQHELEKKKREYMWKLQQKDEFYEIMDRNVKETEKENKRLLRKRT 921
>Z93785-5|CAB07861.3| 321|Caenorhabditis elegans Hypothetical
protein W09D10.5 protein.
Length = 321
Score = 28.3 bits (60), Expect = 5.7
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = -3
Query: 636 INSALPISDSFGIGLIRI-----QIFMHFQSVEWLIRTLFHKS-NLRCAFILHKLLSNIF 475
I+ AL +S + IG++ I I H +E T +S NLRC ILHK
Sbjct: 19 IHLALGVSLGYLIGILFIFDGDNDISKHIHLMEHEKSTPKPESFNLRCVIILHKATHKPE 78
Query: 474 ELIISLRQCYGIFMSFLINFTIF*FKLMGKFQYF 373
+I ++ Y I FT KL KFQ F
Sbjct: 79 NIISAITDGYAKLCQETIFFTNN-QKLFDKFQKF 111
>Z78198-9|CAE17828.1| 164|Caenorhabditis elegans Hypothetical
protein F55C5.10 protein.
Length = 164
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 373 KVLELTHQLELKDSEIYQKTHEYTITLTQRNDEFENVRQQLVEYESASKI 522
K+ H+L+++ E +K HE L ++ E R++LVE + K+
Sbjct: 109 KLASEKHELKVERQEFAEKKHEMAKRLRKQRKISEYYRRKLVEIQRLQKM 158
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 2 SSTQEETHKIVTMEQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEK 166
+ +E K+ ++ +L+SKL D L ++QE+ D+ Q + E+ D K
Sbjct: 912 ADAEERNEKLNQLK--ATLESKLSDITGQLEDMQERNEDLARQKKKTDQELSDTK 964
>Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical
protein F08B12.1 protein.
Length = 866
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 74 DKEEHLRNLQEKYADVINQLEI-LRSEIED 160
DK+ HL LQ+ D NQL+I LR+ +E+
Sbjct: 571 DKKYHLNKLQDFEKDAYNQLQISLRTTMEN 600
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 2 SSTQEETHKIVTMEQVTSLQSKLQDKEEHLRNLQEKYADVINQLEILRSEIEDEK 166
+ +E K+ ++ +L+SKL D L ++QE+ D+ Q + E+ D K
Sbjct: 912 ADAEERNEKLNQLK--ATLESKLSDITGQLEDMQERNEDLARQKKKTDQELSDTK 964
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,966,574
Number of Sequences: 27780
Number of extensions: 228975
Number of successful extensions: 970
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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